Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmmt11a16
         (722 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    23   3.9  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    23   3.9  
DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chlor...    22   6.7  
DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chlor...    22   6.7  
DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.               21   8.9  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    21   8.9  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    21   8.9  
AY569697-1|AAS86650.1|  413|Apis mellifera complementary sex det...    21   8.9  
AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex det...    21   8.9  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          21   8.9  

>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -2

Query: 193 KIYFFSKNVSSYFDILQLVYVYY 125
           KIY FS + S+   +L  + +YY
Sbjct: 250 KIYLFSGHESNIASVLHALQLYY 272


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -2

Query: 193 KIYFFSKNVSSYFDILQLVYVYY 125
           KIY FS + S+   +L  + +YY
Sbjct: 265 KIYLFSGHESNIASVLHALQLYY 287


>DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 6/22 (27%), Positives = 12/22 (54%)
 Frame = -3

Query: 213 VWYDICLKYIFSLKMSVATLIY 148
           +W  +CL ++F   +  A + Y
Sbjct: 306 IWTGVCLTFVFGALLEFALVNY 327


>DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 6/22 (27%), Positives = 12/22 (54%)
 Frame = -3

Query: 213 VWYDICLKYIFSLKMSVATLIY 148
           +W  +CL ++F   +  A + Y
Sbjct: 306 IWTGVCLTFVFGALLEFALVNY 327


>DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.
          Length = 132

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = -3

Query: 42 LKCYLKC 22
          LKCYLKC
Sbjct: 55 LKCYLKC 61


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 9/29 (31%), Positives = 17/29 (58%)
 Frame = +2

Query: 185 IYFRQISYQTYSLHVHT*INESYNALFKQ 271
           +YF +   QTY ++  T +NE + A  ++
Sbjct: 283 LYFIRGCLQTYLINASTYLNEVHTASLRK 311


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 9/29 (31%), Positives = 17/29 (58%)
 Frame = +2

Query: 185 IYFRQISYQTYSLHVHT*INESYNALFKQ 271
           +YF +   QTY ++  T +NE + A  ++
Sbjct: 321 LYFIRGCLQTYLINASTYLNEVHTASLRK 349


>AY569697-1|AAS86650.1|  413|Apis mellifera complementary sex
           determiner protein.
          Length = 413

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 5/28 (17%), Positives = 18/28 (64%)
 Frame = +2

Query: 491 NTKFYRYLHSKHSNNIHICNYVMFLDKL 574
           N   Y+Y ++ ++  ++  NY++ ++++
Sbjct: 325 NNNNYKYNYNNYNKKLYYKNYIINIEQI 352


>AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex
           determiner protein.
          Length = 428

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 13/38 (34%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
 Frame = +2

Query: 476 KTDTGNTKF-YRYLHSKHSNNIHICNYVMFLDKLLYCI 586
           KT   N  + Y Y ++ ++NN +  NY     KL Y I
Sbjct: 321 KTIHNNNNYKYNYNNNNYNNNNYNNNYNNNCKKLYYNI 358


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +3

Query: 12  ICFDTLNSILEFQFQNSI 65
           +CF+ L  I+EF ++  I
Sbjct: 81  VCFNDLKFIIEFVYRGEI 98


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 198,416
Number of Sequences: 438
Number of extensions: 4614
Number of successful extensions: 11
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22413960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)