Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt11a15
(372 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC022526-1|AAH22526.1| 499|Homo sapiens alanine-glyoxylate amin... 71 2e-12
AK091888-1|BAC03766.1| 499|Homo sapiens protein ( Homo sapiens ... 71 2e-12
AJ298293-1|CAC22253.1| 493|Homo sapiens alanine:glyoxylate amin... 71 2e-12
AC097473-1|AAY40946.1| 499|Homo sapiens unknown protein. 71 2e-12
BC110335-1|AAI10336.1| 450|Homo sapiens alanine-glyoxylate amin... 60 2e-09
BC037567-1|AAH37567.1| 450|Homo sapiens alanine-glyoxylate amin... 60 2e-09
BC008009-1|AAH08009.1| 175|Homo sapiens alanine-glyoxylate amin... 60 2e-09
AL391834-11|CAM21148.1| 1673|Homo sapiens DENN/MADD domain conta... 29 6.3
AL391834-3|CAM21140.1| 670|Homo sapiens DENN/MADD domain contai... 29 6.3
AL391834-2|CAM21139.1| 791|Homo sapiens DENN/MADD domain contai... 29 6.3
AL391834-1|CAM21138.1| 1146|Homo sapiens DENN/MADD domain contai... 29 6.3
AL161909-3|CAH70581.2| 1673|Homo sapiens DENN/MADD domain contai... 29 6.3
AK125842-1|BAC86313.1| 1557|Homo sapiens protein ( Homo sapiens ... 29 6.3
AK025705-1|BAB15221.1| 791|Homo sapiens protein ( Homo sapiens ... 29 6.3
>BC022526-1|AAH22526.1| 499|Homo sapiens alanine-glyoxylate
aminotransferase 2-like 1 protein.
Length = 499
Score = 70.5 bits (165), Expect = 2e-12
Identities = 34/85 (40%), Positives = 57/85 (67%), Gaps = 3/85 (3%)
Frame = -1
Query: 372 STEAKHVVNRMREENILISRDGPDSNVLKFKPPMVFTTQDADRLVETLDRVLGELDD--- 202
+ EA+H++ +M+E+ +L+S DGP NVLK KPPM FT +DA +V+ LDR+L L++
Sbjct: 382 TAEAQHIIYKMKEKRVLLSADGPHRNVLKIKPPMCFTEEDAKFMVDQLDRILTVLEEAMG 441
Query: 201 TRISNIKLEVLVTPINTEVPKKENV 127
T+ ++ E TP T++ K+ ++
Sbjct: 442 TKTESVTSE--NTPCKTKMLKEAHI 464
>AK091888-1|BAC03766.1| 499|Homo sapiens protein ( Homo sapiens
cDNA FLJ34569 fis, clone KIDNE2008069, weakly similar to
PROBABLE AMINOTRANSFERASE T01B11.2 (EC 2.6.1.-). ).
Length = 499
Score = 70.5 bits (165), Expect = 2e-12
Identities = 34/85 (40%), Positives = 57/85 (67%), Gaps = 3/85 (3%)
Frame = -1
Query: 372 STEAKHVVNRMREENILISRDGPDSNVLKFKPPMVFTTQDADRLVETLDRVLGELDD--- 202
+ EA+H++ +M+E+ +L+S DGP NVLK KPPM FT +DA +V+ LDR+L L++
Sbjct: 382 TAEAQHIIYKMKEKRVLLSADGPHRNVLKIKPPMCFTEEDAKFMVDQLDRILTVLEEAMG 441
Query: 201 TRISNIKLEVLVTPINTEVPKKENV 127
T+ ++ E TP T++ K+ ++
Sbjct: 442 TKTESVTSE--NTPCKTKMLKEAHI 464
>AJ298293-1|CAC22253.1| 493|Homo sapiens alanine:glyoxylate
aminotransferase 2 homolog 1, splice form 1 protein.
Length = 493
Score = 70.5 bits (165), Expect = 2e-12
Identities = 34/85 (40%), Positives = 57/85 (67%), Gaps = 3/85 (3%)
Frame = -1
Query: 372 STEAKHVVNRMREENILISRDGPDSNVLKFKPPMVFTTQDADRLVETLDRVLGELDD--- 202
+ EA+H++ +M+E+ +L+S DGP NVLK KPPM FT +DA +V+ LDR+L L++
Sbjct: 376 TAEAQHIIYKMKEKRVLLSADGPHRNVLKIKPPMCFTEEDAKFMVDQLDRILTVLEEAMG 435
Query: 201 TRISNIKLEVLVTPINTEVPKKENV 127
T+ ++ E TP T++ K+ ++
Sbjct: 436 TKTESVTSE--NTPCKTKMLKEAHI 458
>AC097473-1|AAY40946.1| 499|Homo sapiens unknown protein.
Length = 499
Score = 70.5 bits (165), Expect = 2e-12
Identities = 34/85 (40%), Positives = 57/85 (67%), Gaps = 3/85 (3%)
Frame = -1
Query: 372 STEAKHVVNRMREENILISRDGPDSNVLKFKPPMVFTTQDADRLVETLDRVLGELDD--- 202
+ EA+H++ +M+E+ +L+S DGP NVLK KPPM FT +DA +V+ LDR+L L++
Sbjct: 382 TAEAQHIIYKMKEKRVLLSADGPHRNVLKIKPPMCFTEEDAKFMVDQLDRILTVLEEAMG 441
Query: 201 TRISNIKLEVLVTPINTEVPKKENV 127
T+ ++ E TP T++ K+ ++
Sbjct: 442 TKTESVTSE--NTPCKTKMLKEAHI 464
>BC110335-1|AAI10336.1| 450|Homo sapiens alanine-glyoxylate
aminotransferase 2-like 2 protein.
Length = 450
Score = 60.1 bits (139), Expect = 2e-09
Identities = 24/55 (43%), Positives = 41/55 (74%)
Frame = -1
Query: 366 EAKHVVNRMREENILISRDGPDSNVLKFKPPMVFTTQDADRLVETLDRVLGELDD 202
EA ++V+R++E +L+S DGP N+LKFKPPM F+ +A ++V LD +L ++++
Sbjct: 384 EAAYLVSRLKENYVLLSTDGPGRNILKFKPPMCFSLDNARQVVAKLDAILTDMEE 438
>BC037567-1|AAH37567.1| 450|Homo sapiens alanine-glyoxylate
aminotransferase 2-like 2 protein.
Length = 450
Score = 60.1 bits (139), Expect = 2e-09
Identities = 24/55 (43%), Positives = 41/55 (74%)
Frame = -1
Query: 366 EAKHVVNRMREENILISRDGPDSNVLKFKPPMVFTTQDADRLVETLDRVLGELDD 202
EA ++V+R++E +L+S DGP N+LKFKPPM F+ +A ++V LD +L ++++
Sbjct: 384 EAAYLVSRLKENYVLLSTDGPGRNILKFKPPMCFSLDNARQVVAKLDAILTDMEE 438
>BC008009-1|AAH08009.1| 175|Homo sapiens alanine-glyoxylate
aminotransferase 2-like 2 protein.
Length = 175
Score = 60.1 bits (139), Expect = 2e-09
Identities = 24/55 (43%), Positives = 41/55 (74%)
Frame = -1
Query: 366 EAKHVVNRMREENILISRDGPDSNVLKFKPPMVFTTQDADRLVETLDRVLGELDD 202
EA ++V+R++E +L+S DGP N+LKFKPPM F+ +A ++V LD +L ++++
Sbjct: 109 EAAYLVSRLKENYVLLSTDGPGRNILKFKPPMCFSLDNARQVVAKLDAILTDMEE 163
>AL391834-11|CAM21148.1| 1673|Homo sapiens DENN/MADD domain containing
4C protein.
Length = 1673
Score = 28.7 bits (61), Expect = 6.3
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +2
Query: 206 SNSPKTLSRVSTSLSASCVVNTMGGLNFNTLLSGP 310
S S L R S S VVN++ GL + +LSGP
Sbjct: 1087 STSLSALVRSSPHGSLGSVVNSLSGLKLDNILSGP 1121
>AL391834-3|CAM21140.1| 670|Homo sapiens DENN/MADD domain
containing 4C protein.
Length = 670
Score = 28.7 bits (61), Expect = 6.3
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +2
Query: 206 SNSPKTLSRVSTSLSASCVVNTMGGLNFNTLLSGP 310
S S L R S S VVN++ GL + +LSGP
Sbjct: 84 STSLSALVRSSPHGSLGSVVNSLSGLKLDNILSGP 118
>AL391834-2|CAM21139.1| 791|Homo sapiens DENN/MADD domain
containing 4C protein.
Length = 791
Score = 28.7 bits (61), Expect = 6.3
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +2
Query: 206 SNSPKTLSRVSTSLSASCVVNTMGGLNFNTLLSGP 310
S S L R S S VVN++ GL + +LSGP
Sbjct: 269 STSLSALVRSSPHGSLGSVVNSLSGLKLDNILSGP 303
>AL391834-1|CAM21138.1| 1146|Homo sapiens DENN/MADD domain
containing 4C protein.
Length = 1146
Score = 28.7 bits (61), Expect = 6.3
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +2
Query: 206 SNSPKTLSRVSTSLSASCVVNTMGGLNFNTLLSGP 310
S S L R S S VVN++ GL + +LSGP
Sbjct: 560 STSLSALVRSSPHGSLGSVVNSLSGLKLDNILSGP 594
>AL161909-3|CAH70581.2| 1673|Homo sapiens DENN/MADD domain containing
4C protein.
Length = 1673
Score = 28.7 bits (61), Expect = 6.3
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +2
Query: 206 SNSPKTLSRVSTSLSASCVVNTMGGLNFNTLLSGP 310
S S L R S S VVN++ GL + +LSGP
Sbjct: 1087 STSLSALVRSSPHGSLGSVVNSLSGLKLDNILSGP 1121
>AK125842-1|BAC86313.1| 1557|Homo sapiens protein ( Homo sapiens cDNA
FLJ43854 fis, clone TESTI4007064. ).
Length = 1557
Score = 28.7 bits (61), Expect = 6.3
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +2
Query: 206 SNSPKTLSRVSTSLSASCVVNTMGGLNFNTLLSGP 310
S S L R S S VVN++ GL + +LSGP
Sbjct: 971 STSLSALVRSSPHGSLGSVVNSLSGLKLDNILSGP 1005
>AK025705-1|BAB15221.1| 791|Homo sapiens protein ( Homo sapiens
cDNA: FLJ22052 fis, clone HEP09477. ).
Length = 791
Score = 28.7 bits (61), Expect = 6.3
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +2
Query: 206 SNSPKTLSRVSTSLSASCVVNTMGGLNFNTLLSGP 310
S S L R S S VVN++ GL + +LSGP
Sbjct: 269 STSLSALVRSSPHGSLGSVVNSLSGLKLDNILSGP 303
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 49,174,364
Number of Sequences: 237096
Number of extensions: 909251
Number of successful extensions: 1645
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1622
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1645
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2421480012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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