Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt11a06
(676 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014298-846|AAF46127.2| 2893|Drosophila melanogaster CG15899-PB... 34 0.15
BT011467-1|AAR99125.1| 568|Drosophila melanogaster RE23052p pro... 33 0.27
AY525769-1|AAS48651.1| 1407|Drosophila melanogaster ADAM metallo... 33 0.27
AE014297-1886|AAZ83995.1| 1407|Drosophila melanogaster CG7649-PB... 33 0.27
AE014298-1698|AAF48101.1| 1013|Drosophila melanogaster CG15740-P... 31 1.1
AE014298-1532|AAF47982.1| 378|Drosophila melanogaster CG16922-P... 30 2.5
BT014632-1|AAT27256.1| 2112|Drosophila melanogaster SD12316p pro... 30 3.3
AY058603-1|AAL13832.1| 1553|Drosophila melanogaster LD29482p pro... 30 3.3
AE014298-3031|AAF50897.2| 2181|Drosophila melanogaster CG1412-PA... 30 3.3
BT016021-1|AAV36906.1| 662|Drosophila melanogaster RE15373p pro... 29 4.4
BT003778-1|AAO41459.1| 278|Drosophila melanogaster RE04224p pro... 29 4.4
AE014298-2002|AAN09579.1| 662|Drosophila melanogaster CG11584-P... 29 4.4
AE013599-2441|AAF57885.2| 278|Drosophila melanogaster CG10953-P... 29 4.4
AY118644-1|AAM50013.1| 892|Drosophila melanogaster SD03914p pro... 29 5.8
AY070576-1|AAL48047.1| 527|Drosophila melanogaster RE12101p pro... 29 5.8
AE014297-4274|AAO41609.1| 494|Drosophila melanogaster CG1520-PC... 29 5.8
AE014297-4273|AAN14303.1| 527|Drosophila melanogaster CG1520-PB... 29 5.8
AE014297-4272|AAF56819.1| 527|Drosophila melanogaster CG1520-PA... 29 5.8
AE014297-3578|ABI31205.1| 1728|Drosophila melanogaster CG34100-P... 29 5.8
AE014297-3577|AAN14004.2| 1918|Drosophila melanogaster CG34100-P... 29 5.8
>AE014298-846|AAF46127.2| 2893|Drosophila melanogaster CG15899-PB
protein.
Length = 2893
Score = 34.3 bits (75), Expect = 0.15
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = -2
Query: 609 PSSFTAAPAPLSVPVTAPCHPPTPLQV 529
PS T P PLS+P+ P PTPLQ+
Sbjct: 2700 PSVTTPLPPPLSLPIVTPTSTPTPLQL 2726
>BT011467-1|AAR99125.1| 568|Drosophila melanogaster RE23052p
protein.
Length = 568
Score = 33.5 bits (73), Expect = 0.27
Identities = 17/33 (51%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = -2
Query: 633 VSPT-QSSGPSSFTAAPAPLSVPVTAPCHPPTP 538
V PT Q GP A P P+ P TAP HPP+P
Sbjct: 48 VQPTVQQDGPQRM-APPPPVVKPGTAPIHPPSP 79
>AY525769-1|AAS48651.1| 1407|Drosophila melanogaster ADAM
metalloprotease protein.
Length = 1407
Score = 33.5 bits (73), Expect = 0.27
Identities = 17/33 (51%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = -2
Query: 633 VSPT-QSSGPSSFTAAPAPLSVPVTAPCHPPTP 538
V PT Q GP A P P+ P TAP HPP+P
Sbjct: 887 VQPTVQQDGPQRM-APPPPVVKPGTAPIHPPSP 918
>AE014297-1886|AAZ83995.1| 1407|Drosophila melanogaster CG7649-PB,
isoform B protein.
Length = 1407
Score = 33.5 bits (73), Expect = 0.27
Identities = 17/33 (51%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = -2
Query: 633 VSPT-QSSGPSSFTAAPAPLSVPVTAPCHPPTP 538
V PT Q GP A P P+ P TAP HPP+P
Sbjct: 887 VQPTVQQDGPQRM-APPPPVVKPGTAPIHPPSP 918
>AE014298-1698|AAF48101.1| 1013|Drosophila melanogaster CG15740-PA
protein.
Length = 1013
Score = 31.5 bits (68), Expect = 1.1
Identities = 16/34 (47%), Positives = 18/34 (52%)
Frame = -2
Query: 630 SPTQSSGPSSFTAAPAPLSVPVTAPCHPPTPLQV 529
SP + P S AAPAPL P AP P P+ V
Sbjct: 628 SPVAAPAPVSI-AAPAPLVAPAPAPAPAPAPVAV 660
Score = 28.7 bits (61), Expect = 7.7
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = -2
Query: 627 PTQSSGPSSFTAAPAPLSVPVTAPCHPPTP 538
PT ++ S AAPAP+S+ AP P P
Sbjct: 620 PTATAPAPSPVAAPAPVSIAAPAPLVAPAP 649
>AE014298-1532|AAF47982.1| 378|Drosophila melanogaster CG16922-PA
protein.
Length = 378
Score = 30.3 bits (65), Expect = 2.5
Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = -2
Query: 627 PTQSSGP-SSFTAAPAPLSVPVTAPCHPPTP 538
P S P SS + +PAP SVP +AP P P
Sbjct: 255 PHMESHPTSSSSCSPAPASVPASAPAPGPAP 285
>BT014632-1|AAT27256.1| 2112|Drosophila melanogaster SD12316p
protein.
Length = 2112
Score = 29.9 bits (64), Expect = 3.3
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 5/41 (12%)
Frame = -2
Query: 636 EVSPTQSSGPSSFTAA-----PAPLSVPVTAPCHPPTPLQV 529
+ + T +SGP+S +AA P P S P AP P P+ +
Sbjct: 778 DAAATGASGPASASAASSAPGPTPSSAPAPAPAPAPLPISI 818
>AY058603-1|AAL13832.1| 1553|Drosophila melanogaster LD29482p
protein.
Length = 1553
Score = 29.9 bits (64), Expect = 3.3
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 5/41 (12%)
Frame = -2
Query: 636 EVSPTQSSGPSSFTAA-----PAPLSVPVTAPCHPPTPLQV 529
+ + T +SGP+S +AA P P S P AP P P+ +
Sbjct: 148 DAAATGASGPASASAASSAPGPTPSSAPAPAPAPAPLPISI 188
>AE014298-3031|AAF50897.2| 2181|Drosophila melanogaster CG1412-PA
protein.
Length = 2181
Score = 29.9 bits (64), Expect = 3.3
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 5/41 (12%)
Frame = -2
Query: 636 EVSPTQSSGPSSFTAA-----PAPLSVPVTAPCHPPTPLQV 529
+ + T +SGP+S +AA P P S P AP P P+ +
Sbjct: 776 DAAATGASGPASASAASSAPGPTPSSAPAPAPAPAPLPISI 816
>BT016021-1|AAV36906.1| 662|Drosophila melanogaster RE15373p
protein.
Length = 662
Score = 29.5 bits (63), Expect = 4.4
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -2
Query: 621 QSSGPSSFTAAPAPLSVPVTAPCHPP 544
QSSG + +APAP PV+ P P
Sbjct: 75 QSSGQQQYQSAPAPAPAPVSIPAPAP 100
>BT003778-1|AAO41459.1| 278|Drosophila melanogaster RE04224p
protein.
Length = 278
Score = 29.5 bits (63), Expect = 4.4
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = -2
Query: 588 PAPLSVPVTAPCHPPTPLQV 529
PAP+S+P AP + P P+ +
Sbjct: 211 PAPISIPAPAPVYQPAPISI 230
Score = 29.5 bits (63), Expect = 4.4
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = -2
Query: 588 PAPLSVPVTAPCHPPTPLQVF 526
PAP+S+P AP + P P V+
Sbjct: 225 PAPISIPAPAPVYQPAPAPVY 245
Score = 28.7 bits (61), Expect = 7.7
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = -2
Query: 600 FTAAPAPLSVPVTAPCHPPTPLQV 529
+ APAP+S+P AP P P V
Sbjct: 115 YQPAPAPISIPAPAPIEIPAPAPV 138
>AE014298-2002|AAN09579.1| 662|Drosophila melanogaster CG11584-PB
protein.
Length = 662
Score = 29.5 bits (63), Expect = 4.4
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -2
Query: 621 QSSGPSSFTAAPAPLSVPVTAPCHPP 544
QSSG + +APAP PV+ P P
Sbjct: 75 QSSGQQQYQSAPAPAPAPVSIPAPAP 100
>AE013599-2441|AAF57885.2| 278|Drosophila melanogaster CG10953-PA
protein.
Length = 278
Score = 29.5 bits (63), Expect = 4.4
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = -2
Query: 588 PAPLSVPVTAPCHPPTPLQV 529
PAP+S+P AP + P P+ +
Sbjct: 211 PAPISIPAPAPVYQPAPISI 230
Score = 29.5 bits (63), Expect = 4.4
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = -2
Query: 588 PAPLSVPVTAPCHPPTPLQVF 526
PAP+S+P AP + P P V+
Sbjct: 225 PAPISIPAPAPVYQPAPAPVY 245
Score = 28.7 bits (61), Expect = 7.7
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = -2
Query: 600 FTAAPAPLSVPVTAPCHPPTPLQV 529
+ APAP+S+P AP P P V
Sbjct: 115 YQPAPAPISIPAPAPIEIPAPAPV 138
>AY118644-1|AAM50013.1| 892|Drosophila melanogaster SD03914p
protein.
Length = 892
Score = 29.1 bits (62), Expect = 5.8
Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Frame = -2
Query: 630 SPTQSSGPSSFTAAPAPLSVPVT--APCHPPTP 538
SP+ SS PSS T P + P T +P PP+P
Sbjct: 650 SPSPSSSPSSSTVDHIPPASPATPASPAPPPSP 682
>AY070576-1|AAL48047.1| 527|Drosophila melanogaster RE12101p
protein.
Length = 527
Score = 29.1 bits (62), Expect = 5.8
Identities = 13/30 (43%), Positives = 14/30 (46%)
Frame = -2
Query: 627 PTQSSGPSSFTAAPAPLSVPVTAPCHPPTP 538
P P S P P+S PV AP PP P
Sbjct: 359 PPNRPPPISTAPPPPPVSAPVVAPPPPPPP 388
>AE014297-4274|AAO41609.1| 494|Drosophila melanogaster CG1520-PC,
isoform C protein.
Length = 494
Score = 29.1 bits (62), Expect = 5.8
Identities = 13/30 (43%), Positives = 14/30 (46%)
Frame = -2
Query: 627 PTQSSGPSSFTAAPAPLSVPVTAPCHPPTP 538
P P S P P+S PV AP PP P
Sbjct: 326 PPNRPPPISTAPPPPPVSAPVVAPPPPPPP 355
>AE014297-4273|AAN14303.1| 527|Drosophila melanogaster CG1520-PB,
isoform B protein.
Length = 527
Score = 29.1 bits (62), Expect = 5.8
Identities = 13/30 (43%), Positives = 14/30 (46%)
Frame = -2
Query: 627 PTQSSGPSSFTAAPAPLSVPVTAPCHPPTP 538
P P S P P+S PV AP PP P
Sbjct: 359 PPNRPPPISTAPPPPPVSAPVVAPPPPPPP 388
>AE014297-4272|AAF56819.1| 527|Drosophila melanogaster CG1520-PA,
isoform A protein.
Length = 527
Score = 29.1 bits (62), Expect = 5.8
Identities = 13/30 (43%), Positives = 14/30 (46%)
Frame = -2
Query: 627 PTQSSGPSSFTAAPAPLSVPVTAPCHPPTP 538
P P S P P+S PV AP PP P
Sbjct: 359 PPNRPPPISTAPPPPPVSAPVVAPPPPPPP 388
>AE014297-3578|ABI31205.1| 1728|Drosophila melanogaster CG34100-PB,
isoform B protein.
Length = 1728
Score = 29.1 bits (62), Expect = 5.8
Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Frame = -2
Query: 630 SPTQSSGPSSFTAAPAPLSVPVT--APCHPPTP 538
SP+ SS PSS T P + P T +P PP+P
Sbjct: 1486 SPSPSSSPSSSTVDHIPPASPATPASPAPPPSP 1518
>AE014297-3577|AAN14004.2| 1918|Drosophila melanogaster CG34100-PA,
isoform A protein.
Length = 1918
Score = 29.1 bits (62), Expect = 5.8
Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Frame = -2
Query: 630 SPTQSSGPSSFTAAPAPLSVPVT--APCHPPTP 538
SP+ SS PSS T P + P T +P PP+P
Sbjct: 1676 SPSPSSSPSSSTVDHIPPASPATPASPAPPPSP 1708
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,122,788
Number of Sequences: 53049
Number of extensions: 462780
Number of successful extensions: 2542
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 2080
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2462
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2930645700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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