Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmmt10p14
         (714 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan oxyge...    25   0.61 
AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan oxyge...    25   0.61 
AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan oxyge...    25   0.61 
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    24   1.4  
L01617-1|AAA30097.1|   46|Tribolium castaneum zinc finger protei...    23   2.5  
AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein pr...    22   5.7  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    22   5.7  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    21   7.5  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   9.9  

>AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 228

 Score = 25.0 bits (52), Expect = 0.61
 Identities = 9/15 (60%), Positives = 14/15 (93%)
 Frame = -1

Query: 66  YKLFVQLWNVSTYVI 22
           YK+FV L+N+ST++I
Sbjct: 181 YKVFVDLFNLSTFLI 195


>AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 25.0 bits (52), Expect = 0.61
 Identities = 9/15 (60%), Positives = 14/15 (93%)
 Frame = -1

Query: 66  YKLFVQLWNVSTYVI 22
           YK+FV L+N+ST++I
Sbjct: 341 YKVFVDLFNLSTFLI 355


>AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 25.0 bits (52), Expect = 0.61
 Identities = 9/15 (60%), Positives = 14/15 (93%)
 Frame = -1

Query: 66  YKLFVQLWNVSTYVI 22
           YK+FV L+N+ST++I
Sbjct: 341 YKVFVDLFNLSTFLI 355


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 8/26 (30%), Positives = 15/26 (57%)
 Frame = -1

Query: 78  CLYCYKLFVQLWNVSTYVIICIFCFY 1
           C+Y +     L+ V   +++CI+ FY
Sbjct: 237 CIYYFYYAFILFTVHLLLLVCIYYFY 262


>L01617-1|AAA30097.1|   46|Tribolium castaneum zinc finger protein
          protein.
          Length = 46

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = -1

Query: 93 SLPTKCLYCYKLFVQLWNVSTYV 25
          +LP KC  C K F + W +  ++
Sbjct: 5  TLPCKCTICPKAFSRPWLLQGHI 27


>AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein
          protein.
          Length = 136

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -1

Query: 87 PTKCLYCYKLFVQLWNVSTYV 25
          P +C+ C K F Q  N++ +V
Sbjct: 21 PYRCIDCNKSFSQAANLTAHV 41


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -1

Query: 87  PTKCLYCYKLFVQLWNVSTYV 25
           P +C+ C K F Q  N++ +V
Sbjct: 277 PYRCIDCNKSFSQAANLTAHV 297


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 6/13 (46%), Positives = 11/13 (84%)
 Frame = -3

Query: 385 EVFLSCHIFFQIL 347
           ++F++C +FF IL
Sbjct: 131 QIFITCELFFVIL 143


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = +1

Query: 16   AYYYVCTNI 42
            AYY +CTN+
Sbjct: 2103 AYYEICTNV 2111


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 140,920
Number of Sequences: 336
Number of extensions: 2999
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18947110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)