Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt10o22
(630 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC032324-1|AAH32324.1| 336|Homo sapiens 3-hydroxyisobutyrate de... 221 1e-57
AF529362-1|AAQ09596.1| 336|Homo sapiens NS5ATP1 protein. 221 1e-57
AB050000-1|BAF42045.1| 336|Homo sapiens 3'-hydroxyisobutyrate d... 221 1e-57
BC064940-1|AAH64940.1| 484|Homo sapiens N-PAC protein protein. 79 1e-14
BC047223-1|AAH47223.1| 553|Homo sapiens cytokine-like nuclear f... 79 1e-14
BC032855-1|AAH32855.1| 553|Homo sapiens cytokine-like nuclear f... 79 1e-14
BC003693-1|AAH03693.1| 523|Homo sapiens Similar to RIKEN cDNA 3... 79 1e-14
AY352585-1|AAQ57265.1| 553|Homo sapiens cytokine-like nuclear f... 79 1e-14
AF326966-1|AAK15524.1| 547|Homo sapiens cytokine-like nuclear f... 79 1e-14
AF244907-1|AAQ14242.1| 553|Homo sapiens 3-hydroxyisobutyrate de... 79 1e-14
AB025027-1|BAB85656.1| 565|Homo sapiens brain carboxylesterase ... 32 1.9
BC101805-1|AAI01806.1| 811|Homo sapiens protocadherin gamma sub... 31 3.4
AF152518-1|AAD43778.1| 811|Homo sapiens protocadherin gamma B2 ... 31 3.4
AF152331-1|AAD43725.1| 931|Homo sapiens protocadherin gamma B2 ... 31 3.4
AK024112-1|BAB14829.1| 305|Homo sapiens protein ( Homo sapiens ... 30 5.9
M58597-1|AAA63173.1| 530|Homo sapiens ELAM-1 ligand fucosyltran... 30 7.8
AB209603-1|BAD92840.1| 337|Homo sapiens amyloid beta (A4) precu... 30 7.8
>BC032324-1|AAH32324.1| 336|Homo sapiens 3-hydroxyisobutyrate
dehydrogenase protein.
Length = 336
Score = 221 bits (541), Expect = 1e-57
Identities = 106/205 (51%), Positives = 143/205 (69%)
Frame = -3
Query: 619 KKGSLLIDSSTIDPNVPKQIFPIALEKGLGFTDAPVSGGVMGAQNATLAFMAGGRKEDFE 440
KKGSLLIDSSTIDP V K++ + G F DAPVSGGV A++ L FM GG +++F
Sbjct: 124 KKGSLLIDSSTIDPAVSKELAKEVEKMGAVFMDAPVSGGVGAARSGNLTFMVGGVEDEFA 183
Query: 439 RSLPLLKVMGAKQFHCGQIGSGQVAKLTNNMLMGITGMATAECMNMGIKMGLEPKVLLDV 260
+ LL MG+ +CG +G+GQ AK+ NNML+ I+ + TAE MN+GI++GL+PK+L +
Sbjct: 184 AAQELLGCMGSNVVYCGAVGTGQAAKICNNMLLAISMIGTAEAMNLGIRLGLDPKLLAKI 243
Query: 259 LNNSSARSWSTEVYCPVPGLVPTAPSSRNYDGGFKNELMVKDLELASGMALGIRSPIPLG 80
LN SS R WS++ Y PVPG++ PS+ NY GGF LM KDL LA A +SPI LG
Sbjct: 244 LNMSSGRCWSSDTYNPVPGVMDGVPSANNYQGGFGTTLMAKDLGLAQDSATSTKSPILLG 303
Query: 79 AVATQLYRIVQSRGYGQKDFSFVFQ 5
++A Q+YR++ ++GY +KDFS VFQ
Sbjct: 304 SLAHQIYRMMCAKGYSKKDFSSVFQ 328
>AF529362-1|AAQ09596.1| 336|Homo sapiens NS5ATP1 protein.
Length = 336
Score = 221 bits (541), Expect = 1e-57
Identities = 106/205 (51%), Positives = 143/205 (69%)
Frame = -3
Query: 619 KKGSLLIDSSTIDPNVPKQIFPIALEKGLGFTDAPVSGGVMGAQNATLAFMAGGRKEDFE 440
KKGSLLIDSSTIDP V K++ + G F DAPVSGGV A++ L FM GG +++F
Sbjct: 124 KKGSLLIDSSTIDPAVSKELAKEVEKMGAVFMDAPVSGGVGAARSGNLTFMVGGVEDEFA 183
Query: 439 RSLPLLKVMGAKQFHCGQIGSGQVAKLTNNMLMGITGMATAECMNMGIKMGLEPKVLLDV 260
+ LL MG+ +CG +G+GQ AK+ NNML+ I+ + TAE MN+GI++GL+PK+L +
Sbjct: 184 AAQELLGCMGSNVVYCGAVGTGQAAKICNNMLLAISMIGTAEAMNLGIRLGLDPKLLAKI 243
Query: 259 LNNSSARSWSTEVYCPVPGLVPTAPSSRNYDGGFKNELMVKDLELASGMALGIRSPIPLG 80
LN SS R WS++ Y PVPG++ PS+ NY GGF LM KDL LA A +SPI LG
Sbjct: 244 LNMSSGRCWSSDTYNPVPGVMDGVPSANNYQGGFGTTLMAKDLGLAQDSATSTKSPILLG 303
Query: 79 AVATQLYRIVQSRGYGQKDFSFVFQ 5
++A Q+YR++ ++GY +KDFS VFQ
Sbjct: 304 SLAHQIYRMMCAKGYSKKDFSSVFQ 328
>AB050000-1|BAF42045.1| 336|Homo sapiens 3'-hydroxyisobutyrate
dehydrogenase protein.
Length = 336
Score = 221 bits (541), Expect = 1e-57
Identities = 106/205 (51%), Positives = 143/205 (69%)
Frame = -3
Query: 619 KKGSLLIDSSTIDPNVPKQIFPIALEKGLGFTDAPVSGGVMGAQNATLAFMAGGRKEDFE 440
KKGSLLIDSSTIDP V K++ + G F DAPVSGGV A++ L FM GG +++F
Sbjct: 124 KKGSLLIDSSTIDPAVSKELAKEVEKMGAVFMDAPVSGGVGAARSGNLTFMVGGVEDEFA 183
Query: 439 RSLPLLKVMGAKQFHCGQIGSGQVAKLTNNMLMGITGMATAECMNMGIKMGLEPKVLLDV 260
+ LL MG+ +CG +G+GQ AK+ NNML+ I+ + TAE MN+GI++GL+PK+L +
Sbjct: 184 AAQELLGCMGSNVVYCGAVGTGQAAKICNNMLLAISMIGTAEAMNLGIRLGLDPKLLAKI 243
Query: 259 LNNSSARSWSTEVYCPVPGLVPTAPSSRNYDGGFKNELMVKDLELASGMALGIRSPIPLG 80
LN SS R WS++ Y PVPG++ PS+ NY GGF LM KDL LA A +SPI LG
Sbjct: 244 LNMSSGRCWSSDTYNPVPGVMDGVPSANNYQGGFGTTLMAKDLGLAQDSATSTKSPILLG 303
Query: 79 AVATQLYRIVQSRGYGQKDFSFVFQ 5
++A Q+YR++ ++GY +KDFS VFQ
Sbjct: 304 SLAHQIYRMMCAKGYSKKDFSSVFQ 328
>BC064940-1|AAH64940.1| 484|Homo sapiens N-PAC protein protein.
Length = 484
Score = 79.0 bits (186), Expect = 1e-14
Identities = 50/205 (24%), Positives = 90/205 (43%)
Frame = -3
Query: 619 KKGSLLIDSSTIDPNVPKQIFPIALEKGLGFTDAPVSGGVMGAQNATLAFMAGGRKEDFE 440
+ G +D ST+D + ++ + + +G F +APVSG + + L +A G + +E
Sbjct: 283 RPGKCYVDMSTVDADTVTELAQVIVSRGGRFLEAPVSGNQQLSNDGMLVILAAGDRGLYE 342
Query: 439 RSLPLLKVMGAKQFHCGQIGSGQVAKLTNNMLMGITGMATAECMNMGIKMGLEPKVLLDV 260
+ MG F G++G+ L NM+ G AE + + G + LLD+
Sbjct: 343 DCSSCFQAMGKTSFFLGEVGNAAKMMLIVNMVQGSFMATIAEGLTLAQVTGQSQQTLLDI 402
Query: 259 LNNSSARSWSTEVYCPVPGLVPTAPSSRNYDGGFKNELMVKDLELASGMALGIRSPIPLG 80
LN S + C ++ N+ F + + KDL LA + + P P+
Sbjct: 403 LNQGQLASIFLDQKC--QNIL-----QGNFKPDFYLKYIQKDLRLAIALGDAVNHPTPMA 455
Query: 79 AVATQLYRIVQSRGYGQKDFSFVFQ 5
A A ++Y+ ++ D S V++
Sbjct: 456 AAANEVYKRAKALDQSDNDMSAVYR 480
>BC047223-1|AAH47223.1| 553|Homo sapiens cytokine-like nuclear
factor n-pac protein.
Length = 553
Score = 79.0 bits (186), Expect = 1e-14
Identities = 50/205 (24%), Positives = 90/205 (43%)
Frame = -3
Query: 619 KKGSLLIDSSTIDPNVPKQIFPIALEKGLGFTDAPVSGGVMGAQNATLAFMAGGRKEDFE 440
+ G +D ST+D + ++ + + +G F +APVSG + + L +A G + +E
Sbjct: 352 RPGKCYVDMSTVDADTVTELAQVIVSRGGRFLEAPVSGNQQLSNDGMLVILAAGDRGLYE 411
Query: 439 RSLPLLKVMGAKQFHCGQIGSGQVAKLTNNMLMGITGMATAECMNMGIKMGLEPKVLLDV 260
+ MG F G++G+ L NM+ G AE + + G + LLD+
Sbjct: 412 DCSSCFQTMGKTSFFLGEVGNAAKMMLIVNMVQGSFMATIAEGLTLAQVTGRSQQTLLDI 471
Query: 259 LNNSSARSWSTEVYCPVPGLVPTAPSSRNYDGGFKNELMVKDLELASGMALGIRSPIPLG 80
LN S + C ++ N+ F + + KDL LA + + P P+
Sbjct: 472 LNQGQLASIFLDQKC--QNIL-----QGNFKPDFYLKYIQKDLRLAIALGDAVNHPTPMA 524
Query: 79 AVATQLYRIVQSRGYGQKDFSFVFQ 5
A A ++Y+ ++ D S V++
Sbjct: 525 AAANEVYKRAKALDQSDNDMSAVYR 549
>BC032855-1|AAH32855.1| 553|Homo sapiens cytokine-like nuclear
factor n-pac protein.
Length = 553
Score = 79.0 bits (186), Expect = 1e-14
Identities = 50/205 (24%), Positives = 90/205 (43%)
Frame = -3
Query: 619 KKGSLLIDSSTIDPNVPKQIFPIALEKGLGFTDAPVSGGVMGAQNATLAFMAGGRKEDFE 440
+ G +D ST+D + ++ + + +G F +APVSG + + L +A G + +E
Sbjct: 352 RPGKCYVDMSTVDADTVTELAQVIVSRGGRFLEAPVSGNQQLSNDGMLVILAAGDRGLYE 411
Query: 439 RSLPLLKVMGAKQFHCGQIGSGQVAKLTNNMLMGITGMATAECMNMGIKMGLEPKVLLDV 260
+ MG F G++G+ L NM+ G AE + + G + LLD+
Sbjct: 412 DCSSCFQAMGKTSFFLGEVGNAAKMMLIVNMVQGSFMATIAEGLTLAQVTGQSQQTLLDI 471
Query: 259 LNNSSARSWSTEVYCPVPGLVPTAPSSRNYDGGFKNELMVKDLELASGMALGIRSPIPLG 80
LN S + C ++ N+ F + + KDL LA + + P P+
Sbjct: 472 LNQGQLASIFLDQKC--QNIL-----QGNFKPDFYLKYIQKDLRLAIALGDAVNHPTPMA 524
Query: 79 AVATQLYRIVQSRGYGQKDFSFVFQ 5
A A ++Y+ ++ D S V++
Sbjct: 525 AAANEVYKRAKALDQSDNDMSAVYR 549
>BC003693-1|AAH03693.1| 523|Homo sapiens Similar to RIKEN cDNA
3930401K13 gene protein.
Length = 523
Score = 79.0 bits (186), Expect = 1e-14
Identities = 50/205 (24%), Positives = 90/205 (43%)
Frame = -3
Query: 619 KKGSLLIDSSTIDPNVPKQIFPIALEKGLGFTDAPVSGGVMGAQNATLAFMAGGRKEDFE 440
+ G +D ST+D + ++ + + +G F +APVSG + + L +A G + +E
Sbjct: 322 RPGKCYVDMSTVDADTVTELAQVIVSRGGRFLEAPVSGNQQLSNDGMLVILAAGDRGLYE 381
Query: 439 RSLPLLKVMGAKQFHCGQIGSGQVAKLTNNMLMGITGMATAECMNMGIKMGLEPKVLLDV 260
+ MG F G++G+ L NM+ G AE + + G + LLD+
Sbjct: 382 DCSSCFQAMGKTSFFLGEVGNAAKMMLIVNMVQGSFMATIAEGLTLAQVTGQSQQTLLDI 441
Query: 259 LNNSSARSWSTEVYCPVPGLVPTAPSSRNYDGGFKNELMVKDLELASGMALGIRSPIPLG 80
LN S + C ++ N+ F + + KDL LA + + P P+
Sbjct: 442 LNQGQLASIFLDQKC--QNIL-----QGNFKPDFYLKYIQKDLRLAIALGDAVNHPTPMA 494
Query: 79 AVATQLYRIVQSRGYGQKDFSFVFQ 5
A A ++Y+ ++ D S V++
Sbjct: 495 AAANEVYKRAKALDQSDNDMSAVYR 519
>AY352585-1|AAQ57265.1| 553|Homo sapiens cytokine-like nuclear
factor n-pac-like protein protein.
Length = 553
Score = 79.0 bits (186), Expect = 1e-14
Identities = 50/205 (24%), Positives = 90/205 (43%)
Frame = -3
Query: 619 KKGSLLIDSSTIDPNVPKQIFPIALEKGLGFTDAPVSGGVMGAQNATLAFMAGGRKEDFE 440
+ G +D ST+D + ++ + + +G F +APVSG + + L +A G + +E
Sbjct: 352 RPGKCYVDMSTVDADTVTELAQVIVSRGGRFLEAPVSGNQQLSNDGMLVILAAGDRGLYE 411
Query: 439 RSLPLLKVMGAKQFHCGQIGSGQVAKLTNNMLMGITGMATAECMNMGIKMGLEPKVLLDV 260
+ MG F G++G+ L NM+ G AE + + G + LLD+
Sbjct: 412 DCSSCFQAMGKTSFFLGEVGNAAKMMLIVNMVQGSFMATIAEGLTLAQVTGQSQQTLLDI 471
Query: 259 LNNSSARSWSTEVYCPVPGLVPTAPSSRNYDGGFKNELMVKDLELASGMALGIRSPIPLG 80
LN S + C ++ N+ F + + KDL LA + + P P+
Sbjct: 472 LNQGQLASIFLDQKC--QNIL-----QGNFKPDFYLKYIQKDLRLAIALGDAVNHPTPMA 524
Query: 79 AVATQLYRIVQSRGYGQKDFSFVFQ 5
A A ++Y+ ++ D S V++
Sbjct: 525 AAANEVYKRAKALDQSDNDMSAVYR 549
>AF326966-1|AAK15524.1| 547|Homo sapiens cytokine-like nuclear
factor n-pac protein.
Length = 547
Score = 79.0 bits (186), Expect = 1e-14
Identities = 50/205 (24%), Positives = 90/205 (43%)
Frame = -3
Query: 619 KKGSLLIDSSTIDPNVPKQIFPIALEKGLGFTDAPVSGGVMGAQNATLAFMAGGRKEDFE 440
+ G +D ST+D + ++ + + +G F +APVSG + + L +A G + +E
Sbjct: 346 RPGKCYVDMSTVDADTVTELAQVIVSRGGRFLEAPVSGNQQLSNDGMLVILAAGDRGLYE 405
Query: 439 RSLPLLKVMGAKQFHCGQIGSGQVAKLTNNMLMGITGMATAECMNMGIKMGLEPKVLLDV 260
+ MG F G++G+ L NM+ G AE + + G + LLD+
Sbjct: 406 DCSSCFQAMGKTSFFLGEVGNAAKMMLIVNMVQGSFMATIAEGLTLAQVTGQSQQTLLDI 465
Query: 259 LNNSSARSWSTEVYCPVPGLVPTAPSSRNYDGGFKNELMVKDLELASGMALGIRSPIPLG 80
LN S + C ++ N+ F + + KDL LA + + P P+
Sbjct: 466 LNQGQLASIFLDQKC--QNIL-----QGNFKPDFYLKYIQKDLRLAIALGDAVNHPTPMA 518
Query: 79 AVATQLYRIVQSRGYGQKDFSFVFQ 5
A A ++Y+ ++ D S V++
Sbjct: 519 AAANEVYKRAKALDQSDNDMSAVYR 543
>AF244907-1|AAQ14242.1| 553|Homo sapiens 3-hydroxyisobutyrate
dehydrogenase-like protein HIBDL protein.
Length = 553
Score = 79.0 bits (186), Expect = 1e-14
Identities = 50/205 (24%), Positives = 90/205 (43%)
Frame = -3
Query: 619 KKGSLLIDSSTIDPNVPKQIFPIALEKGLGFTDAPVSGGVMGAQNATLAFMAGGRKEDFE 440
+ G +D ST+D + ++ + + +G F +APVSG + + L +A G + +E
Sbjct: 352 RPGKCYVDMSTVDADTVTELAQVIVSRGGRFLEAPVSGNQQLSNDGMLVILAAGDRGLYE 411
Query: 439 RSLPLLKVMGAKQFHCGQIGSGQVAKLTNNMLMGITGMATAECMNMGIKMGLEPKVLLDV 260
+ MG F G++G+ L NM+ G AE + + G + LLD+
Sbjct: 412 DCSSCFQAMGKTSFFLGEVGNAAKMMLIVNMVQGSFMATIAEGLTLAQVTGQSQQTLLDI 471
Query: 259 LNNSSARSWSTEVYCPVPGLVPTAPSSRNYDGGFKNELMVKDLELASGMALGIRSPIPLG 80
LN S + C ++ N+ F + + KDL LA + + P P+
Sbjct: 472 LNQGQLASIFLDQKC--QNIL-----QGNFKPDFYLKYIQKDLRLAIALGDAVNHPTPMA 524
Query: 79 AVATQLYRIVQSRGYGQKDFSFVFQ 5
A A ++Y+ ++ D S V++
Sbjct: 525 AAANEVYKRAKALDQSDNDMSAVYR 549
>AB025027-1|BAB85656.1| 565|Homo sapiens brain carboxylesterase
hBr2 protein.
Length = 565
Score = 31.9 bits (69), Expect = 1.9
Identities = 17/39 (43%), Positives = 24/39 (61%)
Frame = -3
Query: 628 LMRKKGSLLIDSSTIDPNVPKQIFPIALEKGLGFTDAPV 512
L +K S L+ S N+P+++ P+A EK LG TD PV
Sbjct: 371 LDQKTASSLLWKSYPIANIPEELTPLASEKYLGGTDDPV 409
>BC101805-1|AAI01806.1| 811|Homo sapiens protocadherin gamma
subfamily B, 2 protein.
Length = 811
Score = 31.1 bits (67), Expect = 3.4
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +2
Query: 26 FLAVAPGLHDAVELSCDSAQWDRRTN 103
FL + P L A +L CD+A W++ TN
Sbjct: 767 FLNITPELVPAQDLVCDNASWEQNTN 792
>AF152518-1|AAD43778.1| 811|Homo sapiens protocadherin gamma B2
short form protein protein.
Length = 811
Score = 31.1 bits (67), Expect = 3.4
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +2
Query: 26 FLAVAPGLHDAVELSCDSAQWDRRTN 103
FL + P L A +L CD+A W++ TN
Sbjct: 767 FLNITPELVPAQDLVCDNASWEQNTN 792
>AF152331-1|AAD43725.1| 931|Homo sapiens protocadherin gamma B2
protein.
Length = 931
Score = 31.1 bits (67), Expect = 3.4
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +2
Query: 26 FLAVAPGLHDAVELSCDSAQWDRRTN 103
FL + P L A +L CD+A W++ TN
Sbjct: 767 FLNITPELVPAQDLVCDNASWEQNTN 792
>AK024112-1|BAB14829.1| 305|Homo sapiens protein ( Homo sapiens
cDNA FLJ14050 fis, clone HEMBA1006796. ).
Length = 305
Score = 30.3 bits (65), Expect = 5.9
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -2
Query: 542 ERAGIHRCTCIWRSHGCSERYPGLHG 465
E+ G+HR TC +R GC+ PG G
Sbjct: 118 EQPGLHRATCGFRGLGCAPGCPGSGG 143
>M58597-1|AAA63173.1| 530|Homo sapiens ELAM-1 ligand
fucosyltransferase protein.
Length = 530
Score = 29.9 bits (64), Expect = 7.8
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +1
Query: 4 AGRRTRSLSGRSPWTARCGRAELRQRPMGSANEYPTPCH 120
+GR+ R++ G + W A A R +G A + P P H
Sbjct: 40 SGRKGRAVPGWASWPAHLALAARPARHLGGAGQGPRPLH 78
>AB209603-1|BAD92840.1| 337|Homo sapiens amyloid beta (A4)
precursor protein-binding, family A, member 3 variant
protein.
Length = 337
Score = 29.9 bits (64), Expect = 7.8
Identities = 17/63 (26%), Positives = 29/63 (46%)
Frame = +3
Query: 375 PEPICPQWNCLAPITLRRGRDLSKSSLRPPAMKARVAF*APMTPPDTGASVNPSPFSRAI 554
P P+ P W A ++ + S RPP R A + + P GAS + + R++
Sbjct: 195 PRPLAPGWGGRAALSTAPEQPPPLS--RPPLFSPRSAASSVVASPSVGASASATASLRSM 252
Query: 555 GKI 563
G++
Sbjct: 253 GRV 255
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,888,682
Number of Sequences: 237096
Number of extensions: 2679012
Number of successful extensions: 15408
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 14967
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15395
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6860268620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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