Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt10o09
(758 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC047447-1|AAH47447.2| 537|Homo sapiens NHEDC2 protein protein. 111 3e-24
AK172823-1|BAD18790.1| 537|Homo sapiens protein ( Homo sapiens ... 111 3e-24
DQ003059-1|AAY21808.1| 515|Homo sapiens NHE domain-containing 1... 107 3e-23
BC132712-1|AAI32713.1| 515|Homo sapiens Na+/H+ exchanger domain... 107 3e-23
BC110794-1|AAI10795.1| 515|Homo sapiens Na+/H+ exchanger domain... 107 3e-23
BC046636-1|AAH46636.1| 243|Homo sapiens NHEDC1 protein protein. 80 7e-15
AY461581-1|AAS91021.1| 475|Homo sapiens Na-H-exchanger protein ... 80 7e-15
BC009732-1|AAH09732.1| 354|Homo sapiens Unknown (protein for IM... 51 4e-06
>BC047447-1|AAH47447.2| 537|Homo sapiens NHEDC2 protein protein.
Length = 537
Score = 111 bits (266), Expect = 3e-24
Identities = 74/232 (31%), Positives = 110/232 (47%), Gaps = 3/232 (1%)
Frame = -2
Query: 754 IIAGVALGSLWGALISFIPESGDTHVVPXXXXXXXXXXXXXXFISSMIEWSGAGPLAIVS 575
++ GVA GS+ G I + P +V F S + G+G L +
Sbjct: 310 VVIGVATGSVLGFFIQYFPSRDQDKLVCKRTFLVLGLSVLAVFSSVHFGFPGSGGLCTLV 369
Query: 574 SGFVAAYYWKKQGWIVNKNPVSDLFRILWIFFEPILFAFTGAQVTISTLDPVVIKMGAVC 395
F+A GW K V + + W F+P+LF GA+V+I++L P + +
Sbjct: 370 MAFLAG-----MGWTSEKAEVEKIIAVAWDIFQPLLFGLIGAEVSIASLRPETVGLCVAT 424
Query: 394 LVSCLLIRAVATFLVSFGCGLNYKEKLFISLTWMAKATVQAALGPAALDLVHRSQTTGES 215
+ +LIR + TFL+ G N KEK+FIS W+ KATVQAA+G ALD +++ GE
Sbjct: 425 VGIAVLIRILTTFLMVCFAGFNLKEKIFISFAWLPKATVQAAIGSVALD---TARSHGE- 480
Query: 214 NKREVYAETXXXXXXXXXXXXXXLGALLIAVTGPKLLTR---DNGDNKVQSE 68
+ E Y +G+LLI + GP+LL + N D +VQ E
Sbjct: 481 KQLEDYGMDVLTVAFLSILITAPIGSLLIGLLGPRLLQKVEHQNKDEEVQGE 532
>AK172823-1|BAD18790.1| 537|Homo sapiens protein ( Homo sapiens
cDNA FLJ23984 fis, clone HEP22543. ).
Length = 537
Score = 111 bits (266), Expect = 3e-24
Identities = 74/232 (31%), Positives = 110/232 (47%), Gaps = 3/232 (1%)
Frame = -2
Query: 754 IIAGVALGSLWGALISFIPESGDTHVVPXXXXXXXXXXXXXXFISSMIEWSGAGPLAIVS 575
++ GVA GS+ G I + P +V F S + G+G L +
Sbjct: 310 VVIGVATGSVLGFFIQYFPSRDQDKLVCKRTFLVLGLSVLAVFSSVHFGFPGSGGLCTLV 369
Query: 574 SGFVAAYYWKKQGWIVNKNPVSDLFRILWIFFEPILFAFTGAQVTISTLDPVVIKMGAVC 395
F+A GW K V + + W F+P+LF GA+V+I++L P + +
Sbjct: 370 MAFLAG-----MGWTSEKAEVEKIIAVAWDIFQPLLFGLIGAEVSIASLRPETVGLCVAT 424
Query: 394 LVSCLLIRAVATFLVSFGCGLNYKEKLFISLTWMAKATVQAALGPAALDLVHRSQTTGES 215
+ +LIR + TFL+ G N KEK+FIS W+ KATVQAA+G ALD +++ GE
Sbjct: 425 VGIAVLIRILTTFLMVCFAGFNLKEKIFISFAWLPKATVQAAIGSVALD---TARSHGE- 480
Query: 214 NKREVYAETXXXXXXXXXXXXXXLGALLIAVTGPKLLTR---DNGDNKVQSE 68
+ E Y +G+LLI + GP+LL + N D +VQ E
Sbjct: 481 KQLEDYGMDVLTVAFLSILITAPIGSLLIGLLGPRLLQKVEHQNKDEEVQGE 532
>DQ003059-1|AAY21808.1| 515|Homo sapiens NHE domain-containing 1
protein protein.
Length = 515
Score = 107 bits (258), Expect = 3e-23
Identities = 60/190 (31%), Positives = 99/190 (52%)
Frame = -2
Query: 622 SSMIEWSGAGPLAIVSSGFVAAYYWKKQGWIVNKNPVSDLFRILWIFFEPILFAFTGAQV 443
S I G+G L + F+A W ++ K V + +W F+P+LF GA+V
Sbjct: 334 SQRIGLHGSGGLCTLVLSFIAGTKWSQE-----KMKVQKIITTVWDIFQPLLFGLVGAEV 388
Query: 442 TISTLDPVVIKMGAVCLVSCLLIRAVATFLVSFGCGLNYKEKLFISLTWMAKATVQAALG 263
++S+L+ ++ + L L +R + T+L+ G ++KEK+FI+L WM KATVQA LG
Sbjct: 389 SVSSLESNIVGISVATLSLALCVRILTTYLLMCFAGFSFKEKIFIALAWMPKATVQAVLG 448
Query: 262 PAALDLVHRSQTTGESNKREVYAETXXXXXXXXXXXXXXLGALLIAVTGPKLLTRDNGDN 83
P AL+ S + E YA+ GALL+ + GPK+LTR +
Sbjct: 449 PLALETARVS-----APHLEPYAKDVMTVAFLAILITAPNGALLMGILGPKMLTRHYDPS 503
Query: 82 KVQSEVESMK 53
K++ ++ +++
Sbjct: 504 KIKLQLSTLE 513
>BC132712-1|AAI32713.1| 515|Homo sapiens Na+/H+ exchanger domain
containing 1 protein.
Length = 515
Score = 107 bits (258), Expect = 3e-23
Identities = 60/190 (31%), Positives = 99/190 (52%)
Frame = -2
Query: 622 SSMIEWSGAGPLAIVSSGFVAAYYWKKQGWIVNKNPVSDLFRILWIFFEPILFAFTGAQV 443
S I G+G L + F+A W ++ K V + +W F+P+LF GA+V
Sbjct: 334 SQRIGLHGSGGLCTLVLSFIAGTKWSQE-----KMKVQKIITTVWDIFQPLLFGLVGAEV 388
Query: 442 TISTLDPVVIKMGAVCLVSCLLIRAVATFLVSFGCGLNYKEKLFISLTWMAKATVQAALG 263
++S+L+ ++ + L L +R + T+L+ G ++KEK+FI+L WM KATVQA LG
Sbjct: 389 SVSSLESNIVGISVATLSLALCVRILTTYLLMCFAGFSFKEKIFIALAWMPKATVQAVLG 448
Query: 262 PAALDLVHRSQTTGESNKREVYAETXXXXXXXXXXXXXXLGALLIAVTGPKLLTRDNGDN 83
P AL+ S + E YA+ GALL+ + GPK+LTR +
Sbjct: 449 PLALETARVS-----APHLEPYAKDVMTVAFLAILITAPNGALLMGILGPKMLTRHYDPS 503
Query: 82 KVQSEVESMK 53
K++ ++ +++
Sbjct: 504 KIKLQLSTLE 513
>BC110794-1|AAI10795.1| 515|Homo sapiens Na+/H+ exchanger domain
containing 1 protein.
Length = 515
Score = 107 bits (258), Expect = 3e-23
Identities = 60/190 (31%), Positives = 99/190 (52%)
Frame = -2
Query: 622 SSMIEWSGAGPLAIVSSGFVAAYYWKKQGWIVNKNPVSDLFRILWIFFEPILFAFTGAQV 443
S I G+G L + F+A W ++ K V + +W F+P+LF GA+V
Sbjct: 334 SQRIGLHGSGGLCTLVLSFIAGTKWSQE-----KMKVQKIITTVWDIFQPLLFGLVGAEV 388
Query: 442 TISTLDPVVIKMGAVCLVSCLLIRAVATFLVSFGCGLNYKEKLFISLTWMAKATVQAALG 263
++S+L+ ++ + L L +R + T+L+ G ++KEK+FI+L WM KATVQA LG
Sbjct: 389 SVSSLESNIVGISVATLSLALCVRILTTYLLMCFAGFSFKEKIFIALAWMPKATVQAVLG 448
Query: 262 PAALDLVHRSQTTGESNKREVYAETXXXXXXXXXXXXXXLGALLIAVTGPKLLTRDNGDN 83
P AL+ S + E YA+ GALL+ + GPK+LTR +
Sbjct: 449 PLALETARVS-----APHLEPYAKDVMTVAFLAILITAPNGALLMGILGPKMLTRHYDPS 503
Query: 82 KVQSEVESMK 53
K++ ++ +++
Sbjct: 504 KIKLQLSTLE 513
>BC046636-1|AAH46636.1| 243|Homo sapiens NHEDC1 protein protein.
Length = 243
Score = 80.2 bits (189), Expect = 7e-15
Identities = 44/144 (30%), Positives = 73/144 (50%)
Frame = -2
Query: 622 SSMIEWSGAGPLAIVSSGFVAAYYWKKQGWIVNKNPVSDLFRILWIFFEPILFAFTGAQV 443
S I G+G L + F+A W ++ K V + +W F+P+LF GA+V
Sbjct: 102 SQRIGLHGSGGLCTLVLSFIAGTKWSQE-----KMKVQKIITTVWDIFQPLLFGLVGAEV 156
Query: 442 TISTLDPVVIKMGAVCLVSCLLIRAVATFLVSFGCGLNYKEKLFISLTWMAKATVQAALG 263
++S+L+ ++ + L L +R + T+L+ G ++KEK+FI+L WM KATVQ
Sbjct: 157 SVSSLESNIVGISVATLSLALCVRILTTYLLMCFAGFSFKEKIFIALAWMPKATVQINQA 216
Query: 262 PAALDLVHRSQTTGESNKREVYAE 191
L L+ T + K+ Y +
Sbjct: 217 ILLLFLLREEWTNCKVAKKCEYTK 240
>AY461581-1|AAS91021.1| 475|Homo sapiens Na-H-exchanger protein
protein.
Length = 475
Score = 80.2 bits (189), Expect = 7e-15
Identities = 44/144 (30%), Positives = 73/144 (50%)
Frame = -2
Query: 622 SSMIEWSGAGPLAIVSSGFVAAYYWKKQGWIVNKNPVSDLFRILWIFFEPILFAFTGAQV 443
S I G+G L + F+A W ++ K V + +W F+P+LF GA+V
Sbjct: 334 SQRIGLHGSGGLCTLVLSFIAGTKWSQE-----KMKVQKIITTVWDIFQPLLFGLVGAEV 388
Query: 442 TISTLDPVVIKMGAVCLVSCLLIRAVATFLVSFGCGLNYKEKLFISLTWMAKATVQAALG 263
++S+L+ ++ + L L +R + T+L+ G ++KEK+FI+L WM KATVQ
Sbjct: 389 SVSSLESNIVGISVATLSLALCVRILTTYLLMCFAGFSFKEKIFIALAWMPKATVQINQA 448
Query: 262 PAALDLVHRSQTTGESNKREVYAE 191
L L+ T + K+ Y +
Sbjct: 449 ILLLFLLREEWTNCKVAKKCEYTK 472
>BC009732-1|AAH09732.1| 354|Homo sapiens Unknown (protein for
IMAGE:3877337) protein.
Length = 354
Score = 51.2 bits (117), Expect = 4e-06
Identities = 31/114 (27%), Positives = 49/114 (42%)
Frame = -2
Query: 754 IIAGVALGSLWGALISFIPESGDTHVVPXXXXXXXXXXXXXXFISSMIEWSGAGPLAIVS 575
++ GVA GS+ G I + P +V F S + G+G L +
Sbjct: 210 VVIGVATGSVLGFFIQYFPSRDQDKLVCKRTFLVLGLSVLAVFSSVHFGFPGSGGLCTLV 269
Query: 574 SGFVAAYYWKKQGWIVNKNPVSDLFRILWIFFEPILFAFTGAQVTISTLDPVVI 413
F+A GW K V + + W F+P+LF GA+V+I++L P +
Sbjct: 270 MAFLAG-----MGWTSEKAEVEKIIAVAWDIFQPLLFGLIGAEVSIASLRPETV 318
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,239,437
Number of Sequences: 237096
Number of extensions: 2207048
Number of successful extensions: 7982
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 7892
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7977
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9183116696
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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