Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmmt10n19
         (240 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC047363-1|AAH47363.1|  782|Homo sapiens DnaJ (Hsp40) homolog, s...    27   8.0  
AL512883-11|CAI12977.1|  655|Homo sapiens DnaJ (Hsp40) homolog, ...    27   8.0  
AL512883-10|CAI12976.1|  782|Homo sapiens DnaJ (Hsp40) homolog, ...    27   8.0  
AL512883-9|CAI12975.1|  595|Homo sapiens DnaJ (Hsp40) homolog, s...    27   8.0  
AL121992-7|CAI22372.1|  655|Homo sapiens DnaJ (Hsp40) homolog, s...    27   8.0  
AL121992-6|CAI22371.1|  782|Homo sapiens DnaJ (Hsp40) homolog, s...    27   8.0  
AL121992-5|CAI22370.1|  595|Homo sapiens DnaJ (Hsp40) homolog, s...    27   8.0  
AB023179-1|BAA76806.2|  822|Homo sapiens KIAA0962 protein protein.     27   8.0  

>BC047363-1|AAH47363.1|  782|Homo sapiens DnaJ (Hsp40) homolog,
           subfamily C, member 16 protein.
          Length = 782

 Score = 27.5 bits (58), Expect = 8.0
 Identities = 14/50 (28%), Positives = 24/50 (48%)
 Frame = +3

Query: 9   HPLHVFVYVQYLSIGYILIHLPET*NSDKSNRISISTFTVIPYIMVQHHN 158
           + L  F Y  YLS GY+ + L  T   + + R +I+ +     +  +H N
Sbjct: 287 YKLTAFAYKDYLSFGYVYVGLRGT--EEMTRRYNINIYAPTLLVFKEHIN 334


>AL512883-11|CAI12977.1|  655|Homo sapiens DnaJ (Hsp40) homolog,
           subfamily C, member 16 protein.
          Length = 655

 Score = 27.5 bits (58), Expect = 8.0
 Identities = 14/50 (28%), Positives = 24/50 (48%)
 Frame = +3

Query: 9   HPLHVFVYVQYLSIGYILIHLPET*NSDKSNRISISTFTVIPYIMVQHHN 158
           + L  F Y  YLS GY+ + L  T   + + R +I+ +     +  +H N
Sbjct: 287 YKLTAFAYKDYLSFGYVYVGLRGT--EEMTRRYNINIYAPTLLVFKEHIN 334


>AL512883-10|CAI12976.1|  782|Homo sapiens DnaJ (Hsp40) homolog,
           subfamily C, member 16 protein.
          Length = 782

 Score = 27.5 bits (58), Expect = 8.0
 Identities = 14/50 (28%), Positives = 24/50 (48%)
 Frame = +3

Query: 9   HPLHVFVYVQYLSIGYILIHLPET*NSDKSNRISISTFTVIPYIMVQHHN 158
           + L  F Y  YLS GY+ + L  T   + + R +I+ +     +  +H N
Sbjct: 287 YKLTAFAYKDYLSFGYVYVGLRGT--EEMTRRYNINIYAPTLLVFKEHIN 334


>AL512883-9|CAI12975.1|  595|Homo sapiens DnaJ (Hsp40) homolog,
           subfamily C, member 16 protein.
          Length = 595

 Score = 27.5 bits (58), Expect = 8.0
 Identities = 14/50 (28%), Positives = 24/50 (48%)
 Frame = +3

Query: 9   HPLHVFVYVQYLSIGYILIHLPET*NSDKSNRISISTFTVIPYIMVQHHN 158
           + L  F Y  YLS GY+ + L  T   + + R +I+ +     +  +H N
Sbjct: 287 YKLTAFAYKDYLSFGYVYVGLRGT--EEMTRRYNINIYAPTLLVFKEHIN 334


>AL121992-7|CAI22372.1|  655|Homo sapiens DnaJ (Hsp40) homolog,
           subfamily C, member 16 protein.
          Length = 655

 Score = 27.5 bits (58), Expect = 8.0
 Identities = 14/50 (28%), Positives = 24/50 (48%)
 Frame = +3

Query: 9   HPLHVFVYVQYLSIGYILIHLPET*NSDKSNRISISTFTVIPYIMVQHHN 158
           + L  F Y  YLS GY+ + L  T   + + R +I+ +     +  +H N
Sbjct: 287 YKLTAFAYKDYLSFGYVYVGLRGT--EEMTRRYNINIYAPTLLVFKEHIN 334


>AL121992-6|CAI22371.1|  782|Homo sapiens DnaJ (Hsp40) homolog,
           subfamily C, member 16 protein.
          Length = 782

 Score = 27.5 bits (58), Expect = 8.0
 Identities = 14/50 (28%), Positives = 24/50 (48%)
 Frame = +3

Query: 9   HPLHVFVYVQYLSIGYILIHLPET*NSDKSNRISISTFTVIPYIMVQHHN 158
           + L  F Y  YLS GY+ + L  T   + + R +I+ +     +  +H N
Sbjct: 287 YKLTAFAYKDYLSFGYVYVGLRGT--EEMTRRYNINIYAPTLLVFKEHIN 334


>AL121992-5|CAI22370.1|  595|Homo sapiens DnaJ (Hsp40) homolog,
           subfamily C, member 16 protein.
          Length = 595

 Score = 27.5 bits (58), Expect = 8.0
 Identities = 14/50 (28%), Positives = 24/50 (48%)
 Frame = +3

Query: 9   HPLHVFVYVQYLSIGYILIHLPET*NSDKSNRISISTFTVIPYIMVQHHN 158
           + L  F Y  YLS GY+ + L  T   + + R +I+ +     +  +H N
Sbjct: 287 YKLTAFAYKDYLSFGYVYVGLRGT--EEMTRRYNINIYAPTLLVFKEHIN 334


>AB023179-1|BAA76806.2|  822|Homo sapiens KIAA0962 protein protein.
          Length = 822

 Score = 27.5 bits (58), Expect = 8.0
 Identities = 14/50 (28%), Positives = 24/50 (48%)
 Frame = +3

Query: 9   HPLHVFVYVQYLSIGYILIHLPET*NSDKSNRISISTFTVIPYIMVQHHN 158
           + L  F Y  YLS GY+ + L  T   + + R +I+ +     +  +H N
Sbjct: 327 YKLTAFAYKDYLSFGYVYVGLRGT--EEMTRRYNINIYAPTLLVFKEHIN 374


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,009,074
Number of Sequences: 237096
Number of extensions: 530926
Number of successful extensions: 823
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 805
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 823
length of database: 76,859,062
effective HSP length: 58
effective length of database: 63,107,494
effective search space used: 1325257374
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)