Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmmt10n11
         (675 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL160157-1|CAI15432.2|  385|Homo sapiens guanylate cyclase 1, so...    31   2.8  
AF038499-1|AAD09440.2|  617|Homo sapiens soluble guanylyl cyclas...    31   2.8  

>AL160157-1|CAI15432.2|  385|Homo sapiens guanylate cyclase 1,
           soluble, beta 2 protein.
          Length = 385

 Score = 31.5 bits (68), Expect = 2.8
 Identities = 17/49 (34%), Positives = 24/49 (48%)
 Frame = +3

Query: 300 HILSIDMYIIKPFLININVFVPKASTVKNKLNNYIHIIHFTVTAKILQI 446
           HI+  +   +K   +NI  +VP   T   +L+ Y  IIH  VT  I  I
Sbjct: 97  HIVFDESLQVKQARVNIQKYVPGLQTQNIQLDEYFSIIHPQVTFNIFSI 145


>AF038499-1|AAD09440.2|  617|Homo sapiens soluble guanylyl cyclase
           subunit beta 2 protein.
          Length = 617

 Score = 31.5 bits (68), Expect = 2.8
 Identities = 17/49 (34%), Positives = 24/49 (48%)
 Frame = +3

Query: 300 HILSIDMYIIKPFLININVFVPKASTVKNKLNNYIHIIHFTVTAKILQI 446
           HI+  +   +K   +NI  +VP   T   +L+ Y  IIH  VT  I  I
Sbjct: 199 HIVFDESLQVKQARVNIQKYVPGLQTQNIQLDEYFSIIHPQVTFNIFSI 247


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,404,897
Number of Sequences: 237096
Number of extensions: 1541287
Number of successful extensions: 2307
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2274
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2307
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7615267504
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)