Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt10m17
(687 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex det... 25 0.89
DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex det... 25 0.89
DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex det... 25 0.89
DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex det... 23 2.1
DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex det... 23 2.1
DQ000307-1|AAY21180.1| 423|Apis mellifera major royal jelly pro... 23 2.1
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 23 2.1
DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein. 23 3.6
DQ011227-1|AAY63896.1| 484|Apis mellifera Amt-1-like protein pr... 23 3.6
DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex det... 22 4.8
DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex det... 22 4.8
L10433-1|AAA27732.1| 149|Apis mellifera transposase protein. 22 6.3
EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein. 21 8.3
EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein. 21 8.3
>DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 24.6 bits (51), Expect = 0.89
Identities = 14/48 (29%), Positives = 25/48 (52%)
Frame = +3
Query: 114 RKKTRLHKIFTSYFSICKNKTTSKQNNHNIVYVQSEISSHHKFIYNNV 257
R+++R KI +S NKT NN+ Y + +++ K +Y N+
Sbjct: 73 RERSREPKIISSL----SNKTIHNNNNYKYNYNNNNYNNNCKKLYYNI 116
>DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 24.6 bits (51), Expect = 0.89
Identities = 14/48 (29%), Positives = 25/48 (52%)
Frame = +3
Query: 114 RKKTRLHKIFTSYFSICKNKTTSKQNNHNIVYVQSEISSHHKFIYNNV 257
R+++R KI +S NKT NN+ Y + +++ K +Y N+
Sbjct: 73 RERSREPKIISSL----SNKTIHNNNNYKYNYNNNNYNNNCKKLYYNI 116
>DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 24.6 bits (51), Expect = 0.89
Identities = 14/48 (29%), Positives = 25/48 (52%)
Frame = +3
Query: 114 RKKTRLHKIFTSYFSICKNKTTSKQNNHNIVYVQSEISSHHKFIYNNV 257
R+++R KI +S NKT NN+ Y + +++ K +Y N+
Sbjct: 73 RERSREPKIISSL----SNKTIHNNNNYKYNYNNNNYNNNCKKLYYNI 116
>DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.4 bits (48), Expect = 2.1
Identities = 10/37 (27%), Positives = 19/37 (51%)
Frame = -1
Query: 291 KHSILRKLNKSEHYYK*IYDVMIFRTERKLYYDYSVL 181
+H I+ L+ + +Y Y + RKLYY+ + +
Sbjct: 78 EHKIISSLSNNYNYNNNNYKKLYCNNYRKLYYNINYI 114
>DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex
determiner protein.
Length = 186
Score = 23.4 bits (48), Expect = 2.1
Identities = 13/48 (27%), Positives = 25/48 (52%)
Frame = +3
Query: 114 RKKTRLHKIFTSYFSICKNKTTSKQNNHNIVYVQSEISSHHKFIYNNV 257
R+++R KI +S N+T NN+ Y + +++ K +Y N+
Sbjct: 73 RERSREPKIISSL----SNRTIHNNNNYKYNYNNNNYNNNCKKLYYNI 116
>DQ000307-1|AAY21180.1| 423|Apis mellifera major royal jelly
protein 9 protein.
Length = 423
Score = 23.4 bits (48), Expect = 2.1
Identities = 21/59 (35%), Positives = 27/59 (45%)
Frame = +3
Query: 117 KKTRLHKIFTSYFSICKNKTTSKQNNHNIVYVQSEISSHHKFIYNNVQIYLACVVCYVL 293
K ++L K I N TT K+N + VQS F YNN +Y+A V Y L
Sbjct: 160 KNSKLLKQVKIPHDIAINSTTGKRNVVTPI-VQS-------FDYNNTWVYIADVEGYAL 210
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 23.4 bits (48), Expect = 2.1
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = +3
Query: 114 RKKTRLHKIFTSYFSICKNKTTSKQNNHNIVYVQSEISSHHKFIYNN 254
R+++R KI +S NKT NN+N + ++++ YNN
Sbjct: 306 RERSREPKIISSL----SNKTIHNNNNYNNNNYNNNYNNYNNNNYNN 348
>DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein.
Length = 828
Score = 22.6 bits (46), Expect = 3.6
Identities = 8/20 (40%), Positives = 15/20 (75%)
Frame = +3
Query: 417 IQNFLIQFILDSISIPKLNL 476
+ N++++ ILD + +PKL L
Sbjct: 506 LPNWILENILDMLVLPKLTL 525
>DQ011227-1|AAY63896.1| 484|Apis mellifera Amt-1-like protein
protein.
Length = 484
Score = 22.6 bits (46), Expect = 3.6
Identities = 6/15 (40%), Positives = 12/15 (80%)
Frame = +1
Query: 538 CCFKNFCMVAFISTV 582
C FK +C+ +F++T+
Sbjct: 143 CNFKAYCLFSFLNTI 157
>DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 22.2 bits (45), Expect = 4.8
Identities = 9/37 (24%), Positives = 19/37 (51%)
Frame = -1
Query: 291 KHSILRKLNKSEHYYK*IYDVMIFRTERKLYYDYSVL 181
+H I+ L+ + +Y Y + +KLYY+ + +
Sbjct: 78 EHKIISSLSNNYNYNNNNYKKLYCNNYKKLYYNINYI 114
>DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 22.2 bits (45), Expect = 4.8
Identities = 9/37 (24%), Positives = 19/37 (51%)
Frame = -1
Query: 291 KHSILRKLNKSEHYYK*IYDVMIFRTERKLYYDYSVL 181
+H I+ L+ + +Y Y + +KLYY+ + +
Sbjct: 78 EHKIISSLSNNYNYNNNNYKKLYCNNYKKLYYNINYI 114
>L10433-1|AAA27732.1| 149|Apis mellifera transposase protein.
Length = 149
Score = 21.8 bits (44), Expect = 6.3
Identities = 7/26 (26%), Positives = 16/26 (61%)
Frame = +3
Query: 183 KQNNHNIVYVQSEISSHHKFIYNNVQ 260
K+ N N +++ I+ K++ NN++
Sbjct: 16 KKRNENDPFLKRPITGDEKWVVNNIK 41
>EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein.
Length = 686
Score = 21.4 bits (43), Expect = 8.3
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +3
Query: 285 YVLCSKLESNSKFLEIPRY 341
+ L S ESN+K EIP Y
Sbjct: 622 FFLSSMDESNTKSYEIPLY 640
>EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein.
Length = 686
Score = 21.4 bits (43), Expect = 8.3
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +3
Query: 285 YVLCSKLESNSKFLEIPRY 341
+ L S ESN+K EIP Y
Sbjct: 622 FFLSSMDESNTKSYEIPLY 640
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 178,462
Number of Sequences: 438
Number of extensions: 3629
Number of successful extensions: 21
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20952180
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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