Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt10m06
(693 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X15109-1|CAA33207.1| 239|Drosophila melanogaster ribosomal pro... 274 1e-73
AY089648-1|AAL90386.1| 252|Drosophila melanogaster RH04903p pro... 274 1e-73
AE014134-1774|AAF52868.1| 252|Drosophila melanogaster CG4897-PA... 274 1e-73
AY071314-1|AAL48936.1| 257|Drosophila melanogaster RE33833p pro... 118 1e-26
BT029578-1|ABL75637.1| 257|Drosophila melanogaster IP16905p pro... 116 4e-26
BT029555-1|ABL75615.1| 257|Drosophila melanogaster IP16805p pro... 116 4e-26
BT021218-1|AAX33366.1| 257|Drosophila melanogaster RH63749p pro... 116 4e-26
AE014134-2146|AAF53155.2| 257|Drosophila melanogaster CG5317-PA... 116 4e-26
BT028802-1|ABI34183.1| 227|Drosophila melanogaster LP23547p pro... 93 2e-19
AY051415-1|AAK92839.1| 382|Drosophila melanogaster GH09360p pro... 30 2.6
AE014297-77|AAF52133.1| 382|Drosophila melanogaster CG9855-PA p... 30 2.6
AE014297-4130|AAF56715.1| 448|Drosophila melanogaster CG13972-P... 29 4.5
>X15109-1|CAA33207.1| 239|Drosophila melanogaster ribosomal
protein protein.
Length = 239
Score = 274 bits (671), Expect = 1e-73
Identities = 133/215 (61%), Positives = 160/215 (74%), Gaps = 2/215 (0%)
Frame = -1
Query: 693 AVPESVLKHXXXXXXXXXXRLQVTLKRRSSAIKKKREIFKRAEQYVKEYRIKERDEIRLA 514
AVPES LK + LK+ + +K+E RAE+Y EY E+ EI+L
Sbjct: 3 AVPESKLKFSKKQISKRVAESKRRLKKAAVIALRKKENLVRAEKYQNEYIKAEQREIKLR 62
Query: 513 RQARNRGNYYVPGEAKLAFVIRIRGINQVSPKVRKVLQLFRLRQINNGVFVRLNKATVNM 334
R A+ R +YVP EAKLAFV+RIRGIN+V+PKVRKVLQLFRLRQINNGVF++LNKAT+NM
Sbjct: 63 RLAKKRNQFYVPAEAKLAFVVRIRGINKVAPKVRKVLQLFRLRQINNGVFIKLNKATINM 122
Query: 333 LRIAEPYIAWGYPNLKSVRELVYKRGFAKLSGQRIPITSNSIVEKRLHK-HNIICVEDLI 157
LRIAEPYI WGYPNLKSVREL+YKRGF K + QR+PIT N ++E++L + H I CVEDL+
Sbjct: 123 LRIAEPYITWGYPNLKSVRELIYKRGFVKHNRQRVPITDNFVIERKLRQAHQIQCVEDLV 182
Query: 156 HEIFTVGEKFKYASNFLWPFKLNNP-XWWLAQEDH 55
HEIFTVG FKYASNFLWPFKLN P W + +H
Sbjct: 183 HEIFTVGPNFKYASNFLWPFKLNTPTGGWRKKANH 217
Score = 53.6 bits (123), Expect = 2e-07
Identities = 21/25 (84%), Positives = 23/25 (92%)
Frame = -2
Query: 77 GGWRKKTIHYVDGGDFGNREDKINR 3
GGWRKK HYV+GGDFGNRED+INR
Sbjct: 209 GGWRKKANHYVNGGDFGNREDQINR 233
>AY089648-1|AAL90386.1| 252|Drosophila melanogaster RH04903p
protein.
Length = 252
Score = 274 bits (671), Expect = 1e-73
Identities = 133/215 (61%), Positives = 160/215 (74%), Gaps = 2/215 (0%)
Frame = -1
Query: 693 AVPESVLKHXXXXXXXXXXRLQVTLKRRSSAIKKKREIFKRAEQYVKEYRIKERDEIRLA 514
AVPES LK + LK+ + +K+E RAE+Y EY E+ EI+L
Sbjct: 16 AVPESKLKFSKKQISKRVAESKRRLKKAAVIALRKKENLVRAEKYQNEYIKAEQREIKLR 75
Query: 513 RQARNRGNYYVPGEAKLAFVIRIRGINQVSPKVRKVLQLFRLRQINNGVFVRLNKATVNM 334
R A+ R +YVP EAKLAFV+RIRGIN+V+PKVRKVLQLFRLRQINNGVF++LNKAT+NM
Sbjct: 76 RLAKKRNQFYVPAEAKLAFVVRIRGINKVAPKVRKVLQLFRLRQINNGVFIKLNKATINM 135
Query: 333 LRIAEPYIAWGYPNLKSVRELVYKRGFAKLSGQRIPITSNSIVEKRLHK-HNIICVEDLI 157
LRIAEPYI WGYPNLKSVREL+YKRGF K + QR+PIT N ++E++L + H I CVEDL+
Sbjct: 136 LRIAEPYITWGYPNLKSVRELIYKRGFVKHNRQRVPITDNFVIERKLRQAHQIQCVEDLV 195
Query: 156 HEIFTVGEKFKYASNFLWPFKLNNP-XWWLAQEDH 55
HEIFTVG FKYASNFLWPFKLN P W + +H
Sbjct: 196 HEIFTVGPNFKYASNFLWPFKLNTPTGGWRKKANH 230
Score = 53.6 bits (123), Expect = 2e-07
Identities = 21/25 (84%), Positives = 23/25 (92%)
Frame = -2
Query: 77 GGWRKKTIHYVDGGDFGNREDKINR 3
GGWRKK HYV+GGDFGNRED+INR
Sbjct: 222 GGWRKKANHYVNGGDFGNREDQINR 246
>AE014134-1774|AAF52868.1| 252|Drosophila melanogaster CG4897-PA
protein.
Length = 252
Score = 274 bits (671), Expect = 1e-73
Identities = 133/215 (61%), Positives = 160/215 (74%), Gaps = 2/215 (0%)
Frame = -1
Query: 693 AVPESVLKHXXXXXXXXXXRLQVTLKRRSSAIKKKREIFKRAEQYVKEYRIKERDEIRLA 514
AVPES LK + LK+ + +K+E RAE+Y EY E+ EI+L
Sbjct: 16 AVPESKLKFSKKQISKRVAESKRRLKKAAVIALRKKENLVRAEKYQNEYIKAEQREIKLR 75
Query: 513 RQARNRGNYYVPGEAKLAFVIRIRGINQVSPKVRKVLQLFRLRQINNGVFVRLNKATVNM 334
R A+ R +YVP EAKLAFV+RIRGIN+V+PKVRKVLQLFRLRQINNGVF++LNKAT+NM
Sbjct: 76 RLAKKRNQFYVPAEAKLAFVVRIRGINKVAPKVRKVLQLFRLRQINNGVFIKLNKATINM 135
Query: 333 LRIAEPYIAWGYPNLKSVRELVYKRGFAKLSGQRIPITSNSIVEKRLHK-HNIICVEDLI 157
LRIAEPYI WGYPNLKSVREL+YKRGF K + QR+PIT N ++E++L + H I CVEDL+
Sbjct: 136 LRIAEPYITWGYPNLKSVRELIYKRGFVKHNRQRVPITDNFVIERKLRQAHQIQCVEDLV 195
Query: 156 HEIFTVGEKFKYASNFLWPFKLNNP-XWWLAQEDH 55
HEIFTVG FKYASNFLWPFKLN P W + +H
Sbjct: 196 HEIFTVGPNFKYASNFLWPFKLNTPTGGWRKKANH 230
Score = 53.6 bits (123), Expect = 2e-07
Identities = 21/25 (84%), Positives = 23/25 (92%)
Frame = -2
Query: 77 GGWRKKTIHYVDGGDFGNREDKINR 3
GGWRKK HYV+GGDFGNRED+INR
Sbjct: 222 GGWRKKANHYVNGGDFGNREDQINR 246
>AY071314-1|AAL48936.1| 257|Drosophila melanogaster RE33833p
protein.
Length = 257
Score = 118 bits (283), Expect = 1e-26
Identities = 71/211 (33%), Positives = 110/211 (52%), Gaps = 11/211 (5%)
Frame = -1
Query: 681 SVLKHXXXXXXXXXXRLQVTLKRRSSAIKKKREI-----FKRAEQYVKEYRIKERDEIRL 517
SVLKH V ++R+ IKK+ F+RAE +V Y ER R+
Sbjct: 17 SVLKHRKRRILQDE---SVVTQKRNDRIKKRTATKNHHKFRRAESFVMGYLKAERTSKRI 73
Query: 516 ARQARNRGNYYVPGEA------KLAFVIRIRGINQVSPKVRKVLQLFRLRQINNGVFVRL 355
+ +A KL FV+R+ G + + R+ +N VF+
Sbjct: 74 KQTILRTNVTEQSAKAADDSNPKLLFVMRLAGKKIFDKTTADIFRTLRMGSRHNAVFMEN 133
Query: 354 NKATVNMLRIAEPYIAWGYPNLKSVRELVYKRGFAKLSGQRIPITSNSIVEKRLHKHNII 175
K +LR+ EP++ +G P+L S+RELV+K+GFA++ G++ I SN++VE++L +I
Sbjct: 134 TKENQLLLRVIEPFVVYGNPSLSSIRELVFKKGFARIDGKKTAIQSNTMVEQQLGDKGVI 193
Query: 174 CVEDLIHEIFTVGEKFKYASNFLWPFKLNNP 82
C+ED+IHEI TVG F + FL F L++P
Sbjct: 194 CLEDIIHEICTVGPNFAAVNEFLCAFTLSSP 224
>BT029578-1|ABL75637.1| 257|Drosophila melanogaster IP16905p
protein.
Length = 257
Score = 116 bits (278), Expect = 4e-26
Identities = 71/211 (33%), Positives = 109/211 (51%), Gaps = 11/211 (5%)
Frame = -1
Query: 681 SVLKHXXXXXXXXXXRLQVTLKRRSSAIKKKREI-----FKRAEQYVKEYRIKERDEIRL 517
SVLKH V ++R+ IKK+ F+RAE +V Y ER R+
Sbjct: 17 SVLKHRKRRILQDE---SVVTQKRNDRIKKRTATKNHHKFRRAESFVMGYLKAERTSKRI 73
Query: 516 ARQARNRGNYYVPGEA------KLAFVIRIRGINQVSPKVRKVLQLFRLRQINNGVFVRL 355
+ +A KL FV+R G + + R+ +N VF+
Sbjct: 74 KQTILRTNVTEQSAKAADDSNPKLLFVMRHAGKKIFDKTTADIFRTLRMGSRHNAVFMEN 133
Query: 354 NKATVNMLRIAEPYIAWGYPNLKSVRELVYKRGFAKLSGQRIPITSNSIVEKRLHKHNII 175
K +LR+ EP++ +G P+L S+RELV+K+GFA++ G++ I SN++VE++L +I
Sbjct: 134 TKENQLLLRVIEPFVVYGNPSLSSIRELVFKKGFARIDGKKTAIQSNTMVEQQLGDKGVI 193
Query: 174 CVEDLIHEIFTVGEKFKYASNFLWPFKLNNP 82
C+ED+IHEI TVG F + FL F L++P
Sbjct: 194 CLEDIIHEICTVGPNFAAVNEFLCAFTLSSP 224
>BT029555-1|ABL75615.1| 257|Drosophila melanogaster IP16805p
protein.
Length = 257
Score = 116 bits (278), Expect = 4e-26
Identities = 71/211 (33%), Positives = 109/211 (51%), Gaps = 11/211 (5%)
Frame = -1
Query: 681 SVLKHXXXXXXXXXXRLQVTLKRRSSAIKKKREI-----FKRAEQYVKEYRIKERDEIRL 517
SVLKH V ++R+ IKK+ F+RAE +V Y ER R+
Sbjct: 17 SVLKHRKRRILQDE---SVVTQKRNDRIKKRTATKNHHKFRRAESFVMGYLKAERTSKRI 73
Query: 516 ARQARNRGNYYVPGEA------KLAFVIRIRGINQVSPKVRKVLQLFRLRQINNGVFVRL 355
+ +A KL FV+R G + + R+ +N VF+
Sbjct: 74 KQTILRTNVTEQSAKAADDSNPKLLFVMRHAGKKIFDKTTADIFRTLRMGSRHNAVFMEN 133
Query: 354 NKATVNMLRIAEPYIAWGYPNLKSVRELVYKRGFAKLSGQRIPITSNSIVEKRLHKHNII 175
K +LR+ EP++ +G P+L S+RELV+K+GFA++ G++ I SN++VE++L +I
Sbjct: 134 TKENQLLLRVIEPFVVYGNPSLSSIRELVFKKGFARIDGKKTAIQSNTMVEQQLGDKGVI 193
Query: 174 CVEDLIHEIFTVGEKFKYASNFLWPFKLNNP 82
C+ED+IHEI TVG F + FL F L++P
Sbjct: 194 CLEDIIHEICTVGPNFAAVNEFLCAFTLSSP 224
>BT021218-1|AAX33366.1| 257|Drosophila melanogaster RH63749p
protein.
Length = 257
Score = 116 bits (278), Expect = 4e-26
Identities = 71/211 (33%), Positives = 109/211 (51%), Gaps = 11/211 (5%)
Frame = -1
Query: 681 SVLKHXXXXXXXXXXRLQVTLKRRSSAIKKKREI-----FKRAEQYVKEYRIKERDEIRL 517
SVLKH V ++R+ IKK+ F+RAE +V Y ER R+
Sbjct: 17 SVLKHRKRRILQDE---SVVTQKRNDRIKKRTATKNHHKFRRAESFVMGYLKAERTSKRI 73
Query: 516 ARQARNRGNYYVPGEA------KLAFVIRIRGINQVSPKVRKVLQLFRLRQINNGVFVRL 355
+ +A KL FV+R G + + R+ +N VF+
Sbjct: 74 KQTILRTNVTEQSAKAADDSNPKLLFVMRHAGKKIFDKTTADIFRTLRMGSRHNAVFMEN 133
Query: 354 NKATVNMLRIAEPYIAWGYPNLKSVRELVYKRGFAKLSGQRIPITSNSIVEKRLHKHNII 175
K +LR+ EP++ +G P+L S+RELV+K+GFA++ G++ I SN++VE++L +I
Sbjct: 134 TKENQLLLRVIEPFVVYGNPSLSSIRELVFKKGFARIDGKKTAIQSNTMVEQQLGDKGVI 193
Query: 174 CVEDLIHEIFTVGEKFKYASNFLWPFKLNNP 82
C+ED+IHEI TVG F + FL F L++P
Sbjct: 194 CLEDIIHEICTVGPNFAAVNEFLCAFTLSSP 224
>AE014134-2146|AAF53155.2| 257|Drosophila melanogaster CG5317-PA
protein.
Length = 257
Score = 116 bits (278), Expect = 4e-26
Identities = 71/211 (33%), Positives = 109/211 (51%), Gaps = 11/211 (5%)
Frame = -1
Query: 681 SVLKHXXXXXXXXXXRLQVTLKRRSSAIKKKREI-----FKRAEQYVKEYRIKERDEIRL 517
SVLKH V ++R+ IKK+ F+RAE +V Y ER R+
Sbjct: 17 SVLKHRKRRILQDE---SVVTQKRNDRIKKRTATKNHHKFRRAESFVMGYLKAERTSKRI 73
Query: 516 ARQARNRGNYYVPGEA------KLAFVIRIRGINQVSPKVRKVLQLFRLRQINNGVFVRL 355
+ +A KL FV+R G + + R+ +N VF+
Sbjct: 74 KQTILRTNVTEQSAKAADDSNPKLLFVMRHAGKKIFDKTTADIFRTLRMGSRHNAVFMEN 133
Query: 354 NKATVNMLRIAEPYIAWGYPNLKSVRELVYKRGFAKLSGQRIPITSNSIVEKRLHKHNII 175
K +LR+ EP++ +G P+L S+RELV+K+GFA++ G++ I SN++VE++L +I
Sbjct: 134 TKENQLLLRVIEPFVVYGNPSLSSIRELVFKKGFARIDGKKTAIQSNTMVEQQLGDKGVI 193
Query: 174 CVEDLIHEIFTVGEKFKYASNFLWPFKLNNP 82
C+ED+IHEI TVG F + FL F L++P
Sbjct: 194 CLEDIIHEICTVGPNFAAVNEFLCAFTLSSP 224
>BT028802-1|ABI34183.1| 227|Drosophila melanogaster LP23547p
protein.
Length = 227
Score = 93.5 bits (222), Expect = 2e-19
Identities = 56/139 (40%), Positives = 83/139 (59%), Gaps = 2/139 (1%)
Frame = +1
Query: 154 MDEVLNTDNVVFMEPL-LNNAVGSDWYTLSTQLGESTFVY*LTDTL*VGVSPSNVRLGDT 330
MD++L+ N+V + L L++ V D + L+ L EST V L L +G++P +V LGD
Sbjct: 1 MDKILDALNLVRLTQLPLDHEVIGDGHALAVMLHESTLVDQLPHGLQIGIAPGDVGLGDA 60
Query: 331 *HIHSSLIQTYKHTIVYLAQSKQLQNFTDLR*NLVDTTDSDDKCQFGFPGNVVVATIACL 510
H+ L+Q +HT+V L Q++QLQN DL +LVDT D+DDK QFG G+V + +
Sbjct: 61 QHVDGGLVQLDEHTVVDLPQTEQLQNLADLGSHLVDTADTDDKGQFGLGGHVELVALLGQ 120
Query: 511 SG*SDFITF-LDAVFLDVL 564
+ D F LD + L +L
Sbjct: 121 ATQLDLALFRLDVLILVLL 139
>AY051415-1|AAK92839.1| 382|Drosophila melanogaster GH09360p
protein.
Length = 382
Score = 30.3 bits (65), Expect = 2.6
Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Frame = -1
Query: 633 LQVTLKRRSSAIKKKREIFKRAEQYVKEYRIKERDEIRLARQARNRGNYYV-PGEAKLAF 457
L++ LK++ +KKR I E+ ++ + + + ARQ R V P E + A
Sbjct: 310 LKIYLKQKQYGRRKKRRIVDYTEENIRNFMHRNNNSAAAARQERLPEQRPVPPAERRDAV 369
Query: 456 VIRIRG 439
+ R RG
Sbjct: 370 ITRQRG 375
>AE014297-77|AAF52133.1| 382|Drosophila melanogaster CG9855-PA
protein.
Length = 382
Score = 30.3 bits (65), Expect = 2.6
Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Frame = -1
Query: 633 LQVTLKRRSSAIKKKREIFKRAEQYVKEYRIKERDEIRLARQARNRGNYYV-PGEAKLAF 457
L++ LK++ +KKR I E+ ++ + + + ARQ R V P E + A
Sbjct: 310 LKIYLKQKQYGRRKKRRIVDYTEENIRNFMHRNNNSAAAARQERLPEQRPVPPAERRDAV 369
Query: 456 VIRIRG 439
+ R RG
Sbjct: 370 ITRQRG 375
>AE014297-4130|AAF56715.1| 448|Drosophila melanogaster CG13972-PA
protein.
Length = 448
Score = 29.5 bits (63), Expect = 4.5
Identities = 11/38 (28%), Positives = 24/38 (63%)
Frame = -1
Query: 630 QVTLKRRSSAIKKKREIFKRAEQYVKEYRIKERDEIRL 517
++ + + ++K +EI++ YV+EYR ++ +E RL
Sbjct: 367 ELRILEQKKLLQKHKEIYEERMTYVQEYRAQKEEEQRL 404
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,379,835
Number of Sequences: 53049
Number of extensions: 703806
Number of successful extensions: 1873
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1797
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1867
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3026039247
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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