Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt10l17
(749 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X64707-1|CAA45963.1| 211|Homo sapiens BBC1 protein. 243 6e-64
BC106058-1|AAI06059.1| 211|Homo sapiens ribosomal protein L13 p... 243 6e-64
BC093063-1|AAH93063.1| 211|Homo sapiens RPL13 protein protein. 243 6e-64
BC063378-1|AAH63378.1| 211|Homo sapiens ribosomal protein L13 p... 243 6e-64
BC027463-1|AAH27463.1| 211|Homo sapiens ribosomal protein L13 p... 243 6e-64
BC020804-1|AAH20804.1| 211|Homo sapiens RPL13 protein protein. 243 6e-64
BC014167-1|AAH14167.1| 211|Homo sapiens ribosomal protein L13 p... 243 6e-64
BC013078-1|AAH13078.1| 211|Homo sapiens ribosomal protein L13 p... 243 6e-64
BC010994-1|AAH10994.1| 211|Homo sapiens ribosomal protein L13 p... 243 6e-64
BC007805-1|AAH07805.1| 211|Homo sapiens ribosomal protein L13 p... 243 6e-64
BC007563-1|AAH07563.1| 211|Homo sapiens ribosomal protein L13 p... 243 6e-64
BC007345-1|AAH07345.1| 211|Homo sapiens ribosomal protein L13 p... 243 6e-64
BC004954-1|AAH04954.1| 211|Homo sapiens RPL13 protein protein. 243 6e-64
AB062392-1|BAB93479.1| 211|Homo sapiens ribosomal protein L13 p... 243 6e-64
BC066320-1|AAH66320.1| 211|Homo sapiens ribosomal protein L13 p... 239 6e-63
AB007172-1|BAA25832.1| 65|Homo sapiens ribosomal protein L13 p... 74 5e-13
BC105801-1|AAI05802.1| 258|Homo sapiens ALKBH6 protein protein. 32 1.9
AB273714-1|BAF63844.1| 238|Homo sapiens alkylation repair homol... 32 1.9
>X64707-1|CAA45963.1| 211|Homo sapiens BBC1 protein.
Length = 211
Score = 243 bits (594), Expect = 6e-64
Identities = 125/206 (60%), Positives = 148/206 (71%), Gaps = 1/206 (0%)
Frame = -3
Query: 645 NNMIXNGHFHXDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXPLRPIVRCPTVR 466
N M+ HFH DWQR V TWFNQPAR+ RR++ R P+RPIVRCPTVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65
Query: 465 YHTKVRAGRGFTLXEIRAAGLNPVFARTIGIAVDPRXRNKSVESLQINVQRIKEYRARLI 286
YHTKVRAGRGF+L E+R AG++ ARTIGI+VDPR RNKS ESLQ NVQR+KEYR++LI
Sbjct: 66 YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQTNVQRLKEYRSKLI 125
Query: 285 LFP-KGKKVLKGEANEEERKLXTQLRGPLMPVQQPAPKSVARPITEDEKNFKAYQYLRGA 109
LFP K KG+++ EE KL TQL GP+MPV+ K AR ITE+EKNFKA+ LR A
Sbjct: 126 LFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKKEKARVITEEEKNFKAFASLRMA 185
Query: 108 RSIAKLVGIRAKRLKDAAENPDDVTK 31
R+ A+L GIRAKR K+AAE DV K
Sbjct: 186 RANARLFGIRAKRAKEAAE--QDVEK 209
>BC106058-1|AAI06059.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 243 bits (594), Expect = 6e-64
Identities = 125/206 (60%), Positives = 148/206 (71%), Gaps = 1/206 (0%)
Frame = -3
Query: 645 NNMIXNGHFHXDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXPLRPIVRCPTVR 466
N M+ HFH DWQR V TWFNQPAR+ RR++ R P+RPIVRCPTVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65
Query: 465 YHTKVRAGRGFTLXEIRAAGLNPVFARTIGIAVDPRXRNKSVESLQINVQRIKEYRARLI 286
YHTKVRAGRGF+L E+R AG++ ARTIGI+VDPR RNKS ESLQ NVQR+KEYR++LI
Sbjct: 66 YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLI 125
Query: 285 LFP-KGKKVLKGEANEEERKLXTQLRGPLMPVQQPAPKSVARPITEDEKNFKAYQYLRGA 109
LFP K KG+++ EE KL TQL GP+MPV+ K AR ITE+EKNFKA+ LR A
Sbjct: 126 LFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKKEKARVITEEEKNFKAFASLRMA 185
Query: 108 RSIAKLVGIRAKRLKDAAENPDDVTK 31
R+ A+L GIRAKR K+AAE DV K
Sbjct: 186 RANARLFGIRAKRAKEAAE--QDVEK 209
>BC093063-1|AAH93063.1| 211|Homo sapiens RPL13 protein protein.
Length = 211
Score = 243 bits (594), Expect = 6e-64
Identities = 125/206 (60%), Positives = 148/206 (71%), Gaps = 1/206 (0%)
Frame = -3
Query: 645 NNMIXNGHFHXDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXPLRPIVRCPTVR 466
N M+ HFH DWQR V TWFNQPAR+ RR++ R P+RPIVRCPTVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65
Query: 465 YHTKVRAGRGFTLXEIRAAGLNPVFARTIGIAVDPRXRNKSVESLQINVQRIKEYRARLI 286
YHTKVRAGRGF+L E+R AG++ ARTIGI+VDPR RNKS ESLQ NVQR+KEYR++LI
Sbjct: 66 YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQTNVQRLKEYRSKLI 125
Query: 285 LFP-KGKKVLKGEANEEERKLXTQLRGPLMPVQQPAPKSVARPITEDEKNFKAYQYLRGA 109
LFP K KG+++ EE KL TQL GP+MPV+ K AR ITE+EKNFKA+ LR A
Sbjct: 126 LFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKKEKARVITEEEKNFKAFASLRMA 185
Query: 108 RSIAKLVGIRAKRLKDAAENPDDVTK 31
R+ A+L GIRAKR K+AAE DV K
Sbjct: 186 RANARLFGIRAKRAKEAAE--QDVEK 209
>BC063378-1|AAH63378.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 243 bits (594), Expect = 6e-64
Identities = 125/206 (60%), Positives = 148/206 (71%), Gaps = 1/206 (0%)
Frame = -3
Query: 645 NNMIXNGHFHXDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXPLRPIVRCPTVR 466
N M+ HFH DWQR V TWFNQPAR+ RR++ R P+RPIVRCPTVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65
Query: 465 YHTKVRAGRGFTLXEIRAAGLNPVFARTIGIAVDPRXRNKSVESLQINVQRIKEYRARLI 286
YHTKVRAGRGF+L E+R AG++ ARTIGI+VDPR RNKS ESLQ NVQR+KEYR++LI
Sbjct: 66 YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLI 125
Query: 285 LFP-KGKKVLKGEANEEERKLXTQLRGPLMPVQQPAPKSVARPITEDEKNFKAYQYLRGA 109
LFP K KG+++ EE KL TQL GP+MPV+ K AR ITE+EKNFKA+ LR A
Sbjct: 126 LFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKKEKARVITEEEKNFKAFASLRMA 185
Query: 108 RSIAKLVGIRAKRLKDAAENPDDVTK 31
R+ A+L GIRAKR K+AAE DV K
Sbjct: 186 RANARLFGIRAKRAKEAAE--QDVEK 209
>BC027463-1|AAH27463.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 243 bits (594), Expect = 6e-64
Identities = 125/206 (60%), Positives = 148/206 (71%), Gaps = 1/206 (0%)
Frame = -3
Query: 645 NNMIXNGHFHXDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXPLRPIVRCPTVR 466
N M+ HFH DWQR V TWFNQPAR+ RR++ R P+RPIVRCPTVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65
Query: 465 YHTKVRAGRGFTLXEIRAAGLNPVFARTIGIAVDPRXRNKSVESLQINVQRIKEYRARLI 286
YHTKVRAGRGF+L E+R AG++ ARTIGI+VDPR RNKS ESLQ NVQR+KEYR++LI
Sbjct: 66 YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLI 125
Query: 285 LFP-KGKKVLKGEANEEERKLXTQLRGPLMPVQQPAPKSVARPITEDEKNFKAYQYLRGA 109
LFP K KG+++ EE KL TQL GP+MPV+ K AR ITE+EKNFKA+ LR A
Sbjct: 126 LFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKKEKARVITEEEKNFKAFASLRMA 185
Query: 108 RSIAKLVGIRAKRLKDAAENPDDVTK 31
R+ A+L GIRAKR K+AAE DV K
Sbjct: 186 RANARLFGIRAKRAKEAAE--QDVEK 209
>BC020804-1|AAH20804.1| 211|Homo sapiens RPL13 protein protein.
Length = 211
Score = 243 bits (594), Expect = 6e-64
Identities = 125/206 (60%), Positives = 148/206 (71%), Gaps = 1/206 (0%)
Frame = -3
Query: 645 NNMIXNGHFHXDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXPLRPIVRCPTVR 466
N M+ HFH DWQR V TWFNQPAR+ RR++ R P+RPIVRCPTVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65
Query: 465 YHTKVRAGRGFTLXEIRAAGLNPVFARTIGIAVDPRXRNKSVESLQINVQRIKEYRARLI 286
YHTKVRAGRGF+L E+R AG++ ARTIGI+VDPR RNKS ESLQ NVQR+KEYR++LI
Sbjct: 66 YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLI 125
Query: 285 LFP-KGKKVLKGEANEEERKLXTQLRGPLMPVQQPAPKSVARPITEDEKNFKAYQYLRGA 109
LFP K KG+++ EE KL TQL GP+MPV+ K AR ITE+EKNFKA+ LR A
Sbjct: 126 LFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKKEKARVITEEEKNFKAFASLRMA 185
Query: 108 RSIAKLVGIRAKRLKDAAENPDDVTK 31
R+ A+L GIRAKR K+AAE DV K
Sbjct: 186 RANARLFGIRAKRAKEAAE--QDVEK 209
>BC014167-1|AAH14167.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 243 bits (594), Expect = 6e-64
Identities = 125/206 (60%), Positives = 148/206 (71%), Gaps = 1/206 (0%)
Frame = -3
Query: 645 NNMIXNGHFHXDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXPLRPIVRCPTVR 466
N M+ HFH DWQR V TWFNQPAR+ RR++ R P+RPIVRCPTVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65
Query: 465 YHTKVRAGRGFTLXEIRAAGLNPVFARTIGIAVDPRXRNKSVESLQINVQRIKEYRARLI 286
YHTKVRAGRGF+L E+R AG++ ARTIGI+VDPR RNKS ESLQ NVQR+KEYR++LI
Sbjct: 66 YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLI 125
Query: 285 LFP-KGKKVLKGEANEEERKLXTQLRGPLMPVQQPAPKSVARPITEDEKNFKAYQYLRGA 109
LFP K KG+++ EE KL TQL GP+MPV+ K AR ITE+EKNFKA+ LR A
Sbjct: 126 LFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKKEKARVITEEEKNFKAFASLRMA 185
Query: 108 RSIAKLVGIRAKRLKDAAENPDDVTK 31
R+ A+L GIRAKR K+AAE DV K
Sbjct: 186 RANARLFGIRAKRAKEAAE--QDVEK 209
>BC013078-1|AAH13078.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 243 bits (594), Expect = 6e-64
Identities = 125/206 (60%), Positives = 148/206 (71%), Gaps = 1/206 (0%)
Frame = -3
Query: 645 NNMIXNGHFHXDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXPLRPIVRCPTVR 466
N M+ HFH DWQR V TWFNQPAR+ RR++ R P+RPIVRCPTVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65
Query: 465 YHTKVRAGRGFTLXEIRAAGLNPVFARTIGIAVDPRXRNKSVESLQINVQRIKEYRARLI 286
YHTKVRAGRGF+L E+R AG++ ARTIGI+VDPR RNKS ESLQ NVQR+KEYR++LI
Sbjct: 66 YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLI 125
Query: 285 LFP-KGKKVLKGEANEEERKLXTQLRGPLMPVQQPAPKSVARPITEDEKNFKAYQYLRGA 109
LFP K KG+++ EE KL TQL GP+MPV+ K AR ITE+EKNFKA+ LR A
Sbjct: 126 LFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKKEKARVITEEEKNFKAFASLRMA 185
Query: 108 RSIAKLVGIRAKRLKDAAENPDDVTK 31
R+ A+L GIRAKR K+AAE DV K
Sbjct: 186 RANARLFGIRAKRAKEAAE--QDVEK 209
>BC010994-1|AAH10994.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 243 bits (594), Expect = 6e-64
Identities = 125/206 (60%), Positives = 148/206 (71%), Gaps = 1/206 (0%)
Frame = -3
Query: 645 NNMIXNGHFHXDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXPLRPIVRCPTVR 466
N M+ HFH DWQR V TWFNQPAR+ RR++ R P+RPIVRCPTVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65
Query: 465 YHTKVRAGRGFTLXEIRAAGLNPVFARTIGIAVDPRXRNKSVESLQINVQRIKEYRARLI 286
YHTKVRAGRGF+L E+R AG++ ARTIGI+VDPR RNKS ESLQ NVQR+KEYR++LI
Sbjct: 66 YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLI 125
Query: 285 LFP-KGKKVLKGEANEEERKLXTQLRGPLMPVQQPAPKSVARPITEDEKNFKAYQYLRGA 109
LFP K KG+++ EE KL TQL GP+MPV+ K AR ITE+EKNFKA+ LR A
Sbjct: 126 LFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKKEKARVITEEEKNFKAFASLRMA 185
Query: 108 RSIAKLVGIRAKRLKDAAENPDDVTK 31
R+ A+L GIRAKR K+AAE DV K
Sbjct: 186 RANARLFGIRAKRAKEAAE--QDVEK 209
>BC007805-1|AAH07805.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 243 bits (594), Expect = 6e-64
Identities = 125/206 (60%), Positives = 148/206 (71%), Gaps = 1/206 (0%)
Frame = -3
Query: 645 NNMIXNGHFHXDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXPLRPIVRCPTVR 466
N M+ HFH DWQR V TWFNQPAR+ RR++ R P+RPIVRCPTVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65
Query: 465 YHTKVRAGRGFTLXEIRAAGLNPVFARTIGIAVDPRXRNKSVESLQINVQRIKEYRARLI 286
YHTKVRAGRGF+L E+R AG++ ARTIGI+VDPR RNKS ESLQ NVQR+KEYR++LI
Sbjct: 66 YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLI 125
Query: 285 LFP-KGKKVLKGEANEEERKLXTQLRGPLMPVQQPAPKSVARPITEDEKNFKAYQYLRGA 109
LFP K KG+++ EE KL TQL GP+MPV+ K AR ITE+EKNFKA+ LR A
Sbjct: 126 LFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKKEKARVITEEEKNFKAFASLRMA 185
Query: 108 RSIAKLVGIRAKRLKDAAENPDDVTK 31
R+ A+L GIRAKR K+AAE DV K
Sbjct: 186 RANARLFGIRAKRAKEAAE--QDVEK 209
>BC007563-1|AAH07563.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 243 bits (594), Expect = 6e-64
Identities = 125/206 (60%), Positives = 148/206 (71%), Gaps = 1/206 (0%)
Frame = -3
Query: 645 NNMIXNGHFHXDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXPLRPIVRCPTVR 466
N M+ HFH DWQR V TWFNQPAR+ RR++ R P+RPIVRCPTVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65
Query: 465 YHTKVRAGRGFTLXEIRAAGLNPVFARTIGIAVDPRXRNKSVESLQINVQRIKEYRARLI 286
YHTKVRAGRGF+L E+R AG++ ARTIGI+VDPR RNKS ESLQ NVQR+KEYR++LI
Sbjct: 66 YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLI 125
Query: 285 LFP-KGKKVLKGEANEEERKLXTQLRGPLMPVQQPAPKSVARPITEDEKNFKAYQYLRGA 109
LFP K KG+++ EE KL TQL GP+MPV+ K AR ITE+EKNFKA+ LR A
Sbjct: 126 LFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKKEKARVITEEEKNFKAFASLRMA 185
Query: 108 RSIAKLVGIRAKRLKDAAENPDDVTK 31
R+ A+L GIRAKR K+AAE DV K
Sbjct: 186 RANARLFGIRAKRAKEAAE--QDVEK 209
>BC007345-1|AAH07345.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 243 bits (594), Expect = 6e-64
Identities = 125/206 (60%), Positives = 148/206 (71%), Gaps = 1/206 (0%)
Frame = -3
Query: 645 NNMIXNGHFHXDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXPLRPIVRCPTVR 466
N M+ HFH DWQR V TWFNQPAR+ RR++ R P+RPIVRCPTVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65
Query: 465 YHTKVRAGRGFTLXEIRAAGLNPVFARTIGIAVDPRXRNKSVESLQINVQRIKEYRARLI 286
YHTKVRAGRGF+L E+R AG++ ARTIGI+VDPR RNKS ESLQ NVQR+KEYR++LI
Sbjct: 66 YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLI 125
Query: 285 LFP-KGKKVLKGEANEEERKLXTQLRGPLMPVQQPAPKSVARPITEDEKNFKAYQYLRGA 109
LFP K KG+++ EE KL TQL GP+MPV+ K AR ITE+EKNFKA+ LR A
Sbjct: 126 LFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKKEKARVITEEEKNFKAFASLRMA 185
Query: 108 RSIAKLVGIRAKRLKDAAENPDDVTK 31
R+ A+L GIRAKR K+AAE DV K
Sbjct: 186 RANARLFGIRAKRAKEAAE--QDVEK 209
>BC004954-1|AAH04954.1| 211|Homo sapiens RPL13 protein protein.
Length = 211
Score = 243 bits (594), Expect = 6e-64
Identities = 125/206 (60%), Positives = 148/206 (71%), Gaps = 1/206 (0%)
Frame = -3
Query: 645 NNMIXNGHFHXDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXPLRPIVRCPTVR 466
N M+ HFH DWQR V TWFNQPAR+ RR++ R P+RPIVRCPTVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65
Query: 465 YHTKVRAGRGFTLXEIRAAGLNPVFARTIGIAVDPRXRNKSVESLQINVQRIKEYRARLI 286
YHTKVRAGRGF+L E+R AG++ ARTIGI+VDPR RNKS ESLQ NVQR+KEYR++LI
Sbjct: 66 YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLI 125
Query: 285 LFP-KGKKVLKGEANEEERKLXTQLRGPLMPVQQPAPKSVARPITEDEKNFKAYQYLRGA 109
LFP K KG+++ EE KL TQL GP+MPV+ K AR ITE+EKNFKA+ LR A
Sbjct: 126 LFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKKEKARVITEEEKNFKAFASLRMA 185
Query: 108 RSIAKLVGIRAKRLKDAAENPDDVTK 31
R+ A+L GIRAKR K+AAE DV K
Sbjct: 186 RANARLFGIRAKRAKEAAE--QDVEK 209
>AB062392-1|BAB93479.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 243 bits (594), Expect = 6e-64
Identities = 125/206 (60%), Positives = 148/206 (71%), Gaps = 1/206 (0%)
Frame = -3
Query: 645 NNMIXNGHFHXDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXPLRPIVRCPTVR 466
N M+ HFH DWQR V TWFNQPAR+ RR++ R P+RPIVRCPTVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65
Query: 465 YHTKVRAGRGFTLXEIRAAGLNPVFARTIGIAVDPRXRNKSVESLQINVQRIKEYRARLI 286
YHTKVRAGRGF+L E+R AG++ ARTIGI+VDPR RNKS ESLQ NVQR+KEYR++LI
Sbjct: 66 YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLI 125
Query: 285 LFP-KGKKVLKGEANEEERKLXTQLRGPLMPVQQPAPKSVARPITEDEKNFKAYQYLRGA 109
LFP K KG+++ EE KL TQL GP+MPV+ K AR ITE+EKNFKA+ LR A
Sbjct: 126 LFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKKEKARVITEEEKNFKAFASLRMA 185
Query: 108 RSIAKLVGIRAKRLKDAAENPDDVTK 31
R+ A+L GIRAKR K+AAE DV K
Sbjct: 186 RANARLFGIRAKRAKEAAE--QDVEK 209
>BC066320-1|AAH66320.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 239 bits (586), Expect = 6e-63
Identities = 124/206 (60%), Positives = 147/206 (71%), Gaps = 1/206 (0%)
Frame = -3
Query: 645 NNMIXNGHFHXDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXPLRPIVRCPTVR 466
N M+ HFH DWQR V TWFNQPAR+ RR++ R P+RPIVRC TVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCTTVR 65
Query: 465 YHTKVRAGRGFTLXEIRAAGLNPVFARTIGIAVDPRXRNKSVESLQINVQRIKEYRARLI 286
YHTKVRAGRGF+L E+R AG++ ARTIGI+VDPR RNKS ESLQ NVQR+KEYR++LI
Sbjct: 66 YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLI 125
Query: 285 LFP-KGKKVLKGEANEEERKLXTQLRGPLMPVQQPAPKSVARPITEDEKNFKAYQYLRGA 109
LFP K KG+++ EE KL TQL GP+MPV+ K AR ITE+EKNFKA+ LR A
Sbjct: 126 LFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKKEKARVITEEEKNFKAFASLRMA 185
Query: 108 RSIAKLVGIRAKRLKDAAENPDDVTK 31
R+ A+L GIRAKR K+AAE DV K
Sbjct: 186 RANARLFGIRAKRAKEAAE--QDVEK 209
>AB007172-1|BAA25832.1| 65|Homo sapiens ribosomal protein L13
protein.
Length = 65
Score = 74.1 bits (174), Expect = 5e-13
Identities = 38/60 (63%), Positives = 45/60 (75%)
Frame = -3
Query: 231 KLXTQLRGPLMPVQQPAPKSVARPITEDEKNFKAYQYLRGARSIAKLVGIRAKRLKDAAE 52
KL TQL GP+MPV+ K AR ITE+EKNFKA+ LR AR+ A+L GIRAKR K+AAE
Sbjct: 2 KLATQLTGPVMPVRNVYKKEKARVITEEEKNFKAFASLRMARANARLFGIRAKRAKEAAE 61
>BC105801-1|AAI05802.1| 258|Homo sapiens ALKBH6 protein protein.
Length = 258
Score = 32.3 bits (70), Expect = 1.9
Identities = 23/66 (34%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Frame = -3
Query: 198 PVQQPAPKSVARPITEDEKNFKAYQYLRGARSIAKLVGIRAKRLK--DAAENPDDVTKAP 25
P +QP P RP T ++ LRG L GI A R+ DAA +P + P
Sbjct: 168 PTEQPRPPP--RPTTSLLLEPRSLLVLRGPAYTRLLHGIAAARVDALDAASSPPNAAACP 225
Query: 24 TAKEGA 7
+A+ GA
Sbjct: 226 SARPGA 231
>AB273714-1|BAF63844.1| 238|Homo sapiens alkylation repair homolog
6 isoform 3 protein.
Length = 238
Score = 32.3 bits (70), Expect = 1.9
Identities = 23/66 (34%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Frame = -3
Query: 198 PVQQPAPKSVARPITEDEKNFKAYQYLRGARSIAKLVGIRAKRLK--DAAENPDDVTKAP 25
P +QP P RP T ++ LRG L GI A R+ DAA +P + P
Sbjct: 148 PTEQPRPPP--RPTTSLLLEPRSLLVLRGPAYTRLLHGIAAARVDALDAASSPPNAAACP 205
Query: 24 TAKEGA 7
+A+ GA
Sbjct: 206 SARPGA 211
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,101,104
Number of Sequences: 237096
Number of extensions: 1985608
Number of successful extensions: 4045
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 3863
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4015
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9015132854
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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