Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmmt10k04
         (657 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK096882-1|BAC04882.1|  130|Homo sapiens protein ( Homo sapiens ...    33   0.68 
U67784-1|AAB16913.1|  302|Homo sapiens orphan G protein-coupled ...    31   4.8  
M64749-1|AAA62370.1|  362|Homo sapiens orphan receptor protein.        31   4.8  
DQ822477-1|ABH01258.1|  362|Homo sapiens chemokine orphan recept...    31   4.8  
BC036661-1|AAH36661.1|  362|Homo sapiens chemokine (C-X-C motif)...    31   4.8  
AF030297-1|AAB94130.1|  362|Homo sapiens G protein coupled recep...    31   4.8  
AC079611-2|AAX93086.1|  362|Homo sapiens unknown protein.              31   4.8  

>AK096882-1|BAC04882.1|  130|Homo sapiens protein ( Homo sapiens
           cDNA FLJ39563 fis, clone SKMUS2001164. ).
          Length = 130

 Score = 33.5 bits (73), Expect = 0.68
 Identities = 15/40 (37%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
 Frame = +3

Query: 324 IIILQTIFFLIHCLQ-MPILFELLKFIYIYKLIKTFFFLL 440
           I+ L  +FFL+ C+Q +PI+ ++L + + +  +KT FF L
Sbjct: 64  ILRLFRLFFLLTCMQGVPIICDVLLYFHTFSSVKTSFFSL 103


>U67784-1|AAB16913.1|  302|Homo sapiens orphan G protein-coupled
           receptor protein.
          Length = 302

 Score = 30.7 bits (66), Expect = 4.8
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = +3

Query: 351 LIHCLQMPILFELLKFIYIYKLIKTFFF 434
           L+HC   P+L+  +   Y Y+L+K F F
Sbjct: 245 LVHCCVNPVLYSFINRNYRYELMKAFIF 272


>M64749-1|AAA62370.1|  362|Homo sapiens orphan receptor protein.
          Length = 362

 Score = 30.7 bits (66), Expect = 4.8
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = +3

Query: 351 LIHCLQMPILFELLKFIYIYKLIKTFFF 434
           L+HC   P+L+  +   Y Y+L+K F F
Sbjct: 305 LVHCCVNPVLYSFINRNYRYELMKAFIF 332


>DQ822477-1|ABH01258.1|  362|Homo sapiens chemokine orphan receptor
           1 protein.
          Length = 362

 Score = 30.7 bits (66), Expect = 4.8
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = +3

Query: 351 LIHCLQMPILFELLKFIYIYKLIKTFFF 434
           L+HC   P+L+  +   Y Y+L+K F F
Sbjct: 305 LVHCCVNPVLYSFINRNYRYELMKAFIF 332


>BC036661-1|AAH36661.1|  362|Homo sapiens chemokine (C-X-C motif)
           receptor 7 protein.
          Length = 362

 Score = 30.7 bits (66), Expect = 4.8
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = +3

Query: 351 LIHCLQMPILFELLKFIYIYKLIKTFFF 434
           L+HC   P+L+  +   Y Y+L+K F F
Sbjct: 305 LVHCCVNPVLYSFINRNYRYELMKAFIF 332


>AF030297-1|AAB94130.1|  362|Homo sapiens G protein coupled receptor
           protein.
          Length = 362

 Score = 30.7 bits (66), Expect = 4.8
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = +3

Query: 351 LIHCLQMPILFELLKFIYIYKLIKTFFF 434
           L+HC   P+L+  +   Y Y+L+K F F
Sbjct: 305 LVHCCVNPVLYSFINRNYRYELMKAFIF 332


>AC079611-2|AAX93086.1|  362|Homo sapiens unknown protein.
          Length = 362

 Score = 30.7 bits (66), Expect = 4.8
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = +3

Query: 351 LIHCLQMPILFELLKFIYIYKLIKTFFF 434
           L+HC   P+L+  +   Y Y+L+K F F
Sbjct: 305 LVHCCVNPVLYSFINRNYRYELMKAFIF 332


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,532,817
Number of Sequences: 237096
Number of extensions: 1264712
Number of successful extensions: 4677
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 4631
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4677
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7366354010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)