Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt10h08
(711 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR456607-1|CAG30493.1| 307|Homo sapiens UFD1L protein. 156 8e-38
BC005087-1|AAH05087.1| 307|Homo sapiens ubiquitin fusion degrad... 156 8e-38
BC001049-1|AAH01049.1| 307|Homo sapiens ubiquitin fusion degrad... 156 8e-38
AY101594-1|AAM48288.1| 307|Homo sapiens ubiquitin fusion degrad... 156 8e-38
AJ239058-1|CAC20414.1| 307|Homo sapiens ubiquitin fusion degrad... 156 8e-38
AF141201-1|AAD28788.1| 307|Homo sapiens ubiquitin fusion-degrad... 156 8e-38
U64444-1|AAD08720.1| 343|Homo sapiens ubiquitin fusion-degradat... 153 6e-37
BC150270-1|AAI50271.1| 1781|Homo sapiens MYST4 protein protein. 34 0.44
BC021128-1|AAH21128.1| 887|Homo sapiens MYST4 protein protein. 34 0.44
AF217500-1|AAL56647.1| 2072|Homo sapiens histone acetyltransfera... 34 0.44
AF119231-1|AAF00100.1| 2073|Homo sapiens histone acetyltransfera... 34 0.44
AF119230-1|AAF00099.1| 1890|Homo sapiens histone acetyltransfera... 34 0.44
AF113514-1|AAF00095.1| 1781|Homo sapiens histone acetyltransfera... 34 0.44
AB002381-1|BAA20837.2| 1781|Homo sapiens KIAA0383 protein. 34 0.44
>CR456607-1|CAG30493.1| 307|Homo sapiens UFD1L protein.
Length = 307
Score = 156 bits (378), Expect = 8e-38
Identities = 89/165 (53%), Positives = 111/165 (67%), Gaps = 2/165 (1%)
Frame = -1
Query: 684 LRNFSCLTTGDVIAIKYNSKVYELCVLETKPGNAVIIIECDMNVEFAPPVGYKEQDHVSR 505
LRNF+CLTTGDVIAI YN K+YEL V+ETKP AV IIECDMNV+F P+GYKE +
Sbjct: 146 LRNFACLTTGDVIAINYNEKIYELRVMETKPDKAVSIIECDMNVDFDAPLGYKEPER-QV 204
Query: 504 SNDGAVEGMDEDPAAMMPESSGFRAFSGEGNRLDGKKKKL-ISESDSEPGTSQPRQSYVR 328
++ + EG + D + E GFRAFSG GNRLDGKKK + S S +PG + R
Sbjct: 205 QHEESTEG-EADHSGYAGE-LGFRAFSGSGNRLDGKKKGVEPSPSPIKPGDIK------R 256
Query: 327 GIPDYDFVIGTLRFIRNSRP-AKDPKEEAQTEPFQAFTGEGFTLR 196
GIP+Y+F +G + FIRNSRP K +E+ F AF+GEG +LR
Sbjct: 257 GIPNYEFKLGKITFIRNSRPLVKKVEEDEAGGRFVAFSGEGQSLR 301
>BC005087-1|AAH05087.1| 307|Homo sapiens ubiquitin fusion
degradation 1 like (yeast) protein.
Length = 307
Score = 156 bits (378), Expect = 8e-38
Identities = 89/165 (53%), Positives = 111/165 (67%), Gaps = 2/165 (1%)
Frame = -1
Query: 684 LRNFSCLTTGDVIAIKYNSKVYELCVLETKPGNAVIIIECDMNVEFAPPVGYKEQDHVSR 505
LRNF+CLTTGDVIAI YN K+YEL V+ETKP AV IIECDMNV+F P+GYKE +
Sbjct: 146 LRNFACLTTGDVIAINYNEKIYELRVMETKPDKAVSIIECDMNVDFDAPLGYKEPER-QV 204
Query: 504 SNDGAVEGMDEDPAAMMPESSGFRAFSGEGNRLDGKKKKL-ISESDSEPGTSQPRQSYVR 328
++ + EG + D + E GFRAFSG GNRLDGKKK + S S +PG + R
Sbjct: 205 QHEESTEG-EADHSGYAGE-LGFRAFSGSGNRLDGKKKGVEPSPSPIKPGDIK------R 256
Query: 327 GIPDYDFVIGTLRFIRNSRP-AKDPKEEAQTEPFQAFTGEGFTLR 196
GIP+Y+F +G + FIRNSRP K +E+ F AF+GEG +LR
Sbjct: 257 GIPNYEFKLGKITFIRNSRPLVKKVEEDEAGGRFVAFSGEGQSLR 301
>BC001049-1|AAH01049.1| 307|Homo sapiens ubiquitin fusion
degradation 1 like (yeast) protein.
Length = 307
Score = 156 bits (378), Expect = 8e-38
Identities = 89/165 (53%), Positives = 111/165 (67%), Gaps = 2/165 (1%)
Frame = -1
Query: 684 LRNFSCLTTGDVIAIKYNSKVYELCVLETKPGNAVIIIECDMNVEFAPPVGYKEQDHVSR 505
LRNF+CLTTGDVIAI YN K+YEL V+ETKP AV IIECDMNV+F P+GYKE +
Sbjct: 146 LRNFACLTTGDVIAINYNEKIYELRVMETKPDKAVSIIECDMNVDFDAPLGYKEPER-QV 204
Query: 504 SNDGAVEGMDEDPAAMMPESSGFRAFSGEGNRLDGKKKKL-ISESDSEPGTSQPRQSYVR 328
++ + EG + D + E GFRAFSG GNRLDGKKK + S S +PG + R
Sbjct: 205 QHEESTEG-EADHSGYAGE-LGFRAFSGSGNRLDGKKKGVEPSPSPIKPGDIK------R 256
Query: 327 GIPDYDFVIGTLRFIRNSRP-AKDPKEEAQTEPFQAFTGEGFTLR 196
GIP+Y+F +G + FIRNSRP K +E+ F AF+GEG +LR
Sbjct: 257 GIPNYEFKLGKITFIRNSRPLVKKVEEDEAGGRFVAFSGEGQSLR 301
>AY101594-1|AAM48288.1| 307|Homo sapiens ubiquitin fusion
degradation 1-like protein.
Length = 307
Score = 156 bits (378), Expect = 8e-38
Identities = 89/165 (53%), Positives = 111/165 (67%), Gaps = 2/165 (1%)
Frame = -1
Query: 684 LRNFSCLTTGDVIAIKYNSKVYELCVLETKPGNAVIIIECDMNVEFAPPVGYKEQDHVSR 505
LRNF+CLTTGDVIAI YN K+YEL V+ETKP AV IIECDMNV+F P+GYKE +
Sbjct: 146 LRNFACLTTGDVIAINYNEKIYELRVMETKPDKAVSIIECDMNVDFDAPLGYKEPER-QV 204
Query: 504 SNDGAVEGMDEDPAAMMPESSGFRAFSGEGNRLDGKKKKL-ISESDSEPGTSQPRQSYVR 328
++ + EG + D + E GFRAFSG GNRLDGKKK + S S +PG + R
Sbjct: 205 QHEESTEG-EADHSGYAGE-LGFRAFSGSGNRLDGKKKGVEPSPSPIKPGDIK------R 256
Query: 327 GIPDYDFVIGTLRFIRNSRP-AKDPKEEAQTEPFQAFTGEGFTLR 196
GIP+Y+F +G + FIRNSRP K +E+ F AF+GEG +LR
Sbjct: 257 GIPNYEFKLGKITFIRNSRPLVKKVEEDEAGGRFVAFSGEGQSLR 301
>AJ239058-1|CAC20414.1| 307|Homo sapiens ubiquitin fusion
degradation 1 protein protein.
Length = 307
Score = 156 bits (378), Expect = 8e-38
Identities = 89/165 (53%), Positives = 111/165 (67%), Gaps = 2/165 (1%)
Frame = -1
Query: 684 LRNFSCLTTGDVIAIKYNSKVYELCVLETKPGNAVIIIECDMNVEFAPPVGYKEQDHVSR 505
LRNF+CLTTGDVIAI YN K+YEL V+ETKP AV IIECDMNV+F P+GYKE +
Sbjct: 146 LRNFACLTTGDVIAINYNEKIYELRVMETKPDKAVSIIECDMNVDFDAPLGYKEPER-QV 204
Query: 504 SNDGAVEGMDEDPAAMMPESSGFRAFSGEGNRLDGKKKKL-ISESDSEPGTSQPRQSYVR 328
++ + EG + D + E GFRAFSG GNRLDGKKK + S S +PG + R
Sbjct: 205 QHEESTEG-EADHSGYAGE-LGFRAFSGSGNRLDGKKKGVEPSPSPIKPGDIK------R 256
Query: 327 GIPDYDFVIGTLRFIRNSRP-AKDPKEEAQTEPFQAFTGEGFTLR 196
GIP+Y+F +G + FIRNSRP K +E+ F AF+GEG +LR
Sbjct: 257 GIPNYEFKLGKITFIRNSRPLVKKVEEDEAGGRFVAFSGEGQSLR 301
>AF141201-1|AAD28788.1| 307|Homo sapiens ubiquitin
fusion-degradation 1 protein protein.
Length = 307
Score = 156 bits (378), Expect = 8e-38
Identities = 89/165 (53%), Positives = 111/165 (67%), Gaps = 2/165 (1%)
Frame = -1
Query: 684 LRNFSCLTTGDVIAIKYNSKVYELCVLETKPGNAVIIIECDMNVEFAPPVGYKEQDHVSR 505
LRNF+CLTTGDVIAI YN K+YEL V+ETKP AV IIECDMNV+F P+GYKE +
Sbjct: 146 LRNFACLTTGDVIAINYNEKIYELRVMETKPDKAVSIIECDMNVDFDAPLGYKEPER-QV 204
Query: 504 SNDGAVEGMDEDPAAMMPESSGFRAFSGEGNRLDGKKKKL-ISESDSEPGTSQPRQSYVR 328
++ + EG + D + E GFRAFSG GNRLDGKKK + S S +PG + R
Sbjct: 205 QHEESTEG-EADHSGYAGE-LGFRAFSGSGNRLDGKKKGVEPSPSPIKPGDIK------R 256
Query: 327 GIPDYDFVIGTLRFIRNSRP-AKDPKEEAQTEPFQAFTGEGFTLR 196
GIP+Y+F +G + FIRNSRP K +E+ F AF+GEG +LR
Sbjct: 257 GIPNYEFKLGKITFIRNSRPLVKKVEEDEAGGRFVAFSGEGQSLR 301
>U64444-1|AAD08720.1| 343|Homo sapiens ubiquitin fusion-degradation
1 like protein protein.
Length = 343
Score = 153 bits (371), Expect = 6e-37
Identities = 88/165 (53%), Positives = 110/165 (66%), Gaps = 2/165 (1%)
Frame = -1
Query: 684 LRNFSCLTTGDVIAIKYNSKVYELCVLETKPGNAVIIIECDMNVEFAPPVGYKEQDHVSR 505
LRNF+CLTTGDVIAI YN K+YEL V+ETKP AV I ECDMNV+F P+GYKE +
Sbjct: 182 LRNFACLTTGDVIAINYNEKIYELRVMETKPDKAVSIHECDMNVDFDAPLGYKEPER-QV 240
Query: 504 SNDGAVEGMDEDPAAMMPESSGFRAFSGEGNRLDGKKKKL-ISESDSEPGTSQPRQSYVR 328
++ + EG + D + E GFRAFSG GNRLDGKKK + S S +PG + R
Sbjct: 241 QHEESTEG-EADHSGYAGE-LGFRAFSGSGNRLDGKKKGVEPSPSPIKPGDIK------R 292
Query: 327 GIPDYDFVIGTLRFIRNSRP-AKDPKEEAQTEPFQAFTGEGFTLR 196
GIP+Y+F +G + FIRNSRP K +E+ F AF+GEG +LR
Sbjct: 293 GIPNYEFKLGKITFIRNSRPLVKKVEEDEAGGRFVAFSGEGQSLR 337
>BC150270-1|AAI50271.1| 1781|Homo sapiens MYST4 protein protein.
Length = 1781
Score = 34.3 bits (75), Expect = 0.44
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = -1
Query: 612 CVLETKPGNAVIIIECDMNVEFAPPVGYKEQDHVSRSNDGAVEGMDE 472
CV+E P ++ + +C M F PP+ E S +N G E M +
Sbjct: 1462 CVVERPPSSSQQLAQCSMAANFTPPMQLAEIPETSNANIGLYERMGQ 1508
>BC021128-1|AAH21128.1| 887|Homo sapiens MYST4 protein protein.
Length = 887
Score = 34.3 bits (75), Expect = 0.44
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = -1
Query: 612 CVLETKPGNAVIIIECDMNVEFAPPVGYKEQDHVSRSNDGAVEGMDE 472
CV+E P ++ + +C M F PP+ E S +N G E M +
Sbjct: 568 CVVERPPSSSQQLAQCSMAANFTPPMQLAEIPETSNANIGLYERMGQ 614
>AF217500-1|AAL56647.1| 2072|Homo sapiens histone acetyltransferase
MOZ2 protein.
Length = 2072
Score = 34.3 bits (75), Expect = 0.44
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = -1
Query: 612 CVLETKPGNAVIIIECDMNVEFAPPVGYKEQDHVSRSNDGAVEGMDE 472
CV+E P ++ + +C M F PP+ E S +N G E M +
Sbjct: 1753 CVVERPPSSSQQLAQCSMAANFTPPMQLAEIPETSNANIGLYERMGQ 1799
>AF119231-1|AAF00100.1| 2073|Homo sapiens histone acetyltransferase
MORF beta protein.
Length = 2073
Score = 34.3 bits (75), Expect = 0.44
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = -1
Query: 612 CVLETKPGNAVIIIECDMNVEFAPPVGYKEQDHVSRSNDGAVEGMDE 472
CV+E P ++ + +C M F PP+ E S +N G E M +
Sbjct: 1754 CVVERPPSSSQQLAQCSMAANFTPPMQLAEIPETSNANIGLYERMGQ 1800
>AF119230-1|AAF00099.1| 1890|Homo sapiens histone acetyltransferase
MORF alpha protein.
Length = 1890
Score = 34.3 bits (75), Expect = 0.44
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = -1
Query: 612 CVLETKPGNAVIIIECDMNVEFAPPVGYKEQDHVSRSNDGAVEGMDE 472
CV+E P ++ + +C M F PP+ E S +N G E M +
Sbjct: 1571 CVVERPPSSSQQLAQCSMAANFTPPMQLAEIPETSNANIGLYERMGQ 1617
>AF113514-1|AAF00095.1| 1781|Homo sapiens histone acetyltransferase
MORF protein.
Length = 1781
Score = 34.3 bits (75), Expect = 0.44
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = -1
Query: 612 CVLETKPGNAVIIIECDMNVEFAPPVGYKEQDHVSRSNDGAVEGMDE 472
CV+E P ++ + +C M F PP+ E S +N G E M +
Sbjct: 1462 CVVERPPSSSQQLAQCSMAANFTPPMQLAEIPETSNANIGLYERMGQ 1508
>AB002381-1|BAA20837.2| 1781|Homo sapiens KIAA0383 protein.
Length = 1781
Score = 34.3 bits (75), Expect = 0.44
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = -1
Query: 612 CVLETKPGNAVIIIECDMNVEFAPPVGYKEQDHVSRSNDGAVEGMDE 472
CV+E P ++ + +C M F PP+ E S +N G E M +
Sbjct: 1462 CVVERPPSSSQQLAQCSMAANFTPPMQLAEIPETSNANIGLYERMGQ 1508
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,296,761
Number of Sequences: 237096
Number of extensions: 2038627
Number of successful extensions: 4381
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 4217
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4367
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8287202872
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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