Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt10g03
(725 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D32143-1|BAA06874.1| 206|Homo sapiens biliverdin-IXbeta reducta... 144 2e-34
D26308-1|BAA05370.1| 206|Homo sapiens NADPH-flavin reductase pr... 144 2e-34
BC109371-1|AAI09372.1| 206|Homo sapiens biliverdin reductase B ... 144 2e-34
AY340485-1|AAP88933.1| 206|Homo sapiens biliverdin reductase B ... 144 2e-34
AJ004862-1|CAA06167.1| 1283|Homo sapiens mucin protein. 33 1.4
AF107890-1|AAG33673.1| 1594|Homo sapiens mucin 5B protein. 33 1.4
AF086604-1|AAC67545.1| 1321|Homo sapiens mucin protein. 33 1.4
BC150265-1|AAI50266.1| 1481|Homo sapiens CRKRS protein protein. 32 1.8
AF227198-1|AAF36401.1| 1490|Homo sapiens CrkRS protein. 32 1.8
AB020711-1|BAA74927.2| 1535|Homo sapiens KIAA0904 protein protein. 32 1.8
Y16787-1|CAA76383.1| 416|Homo sapiens type I hair keratin 1 pro... 31 4.2
X86570-1|CAA60378.1| 416|Homo sapiens type I keratin protein. 31 4.2
BC114468-1|AAI14469.1| 416|Homo sapiens keratin 31 protein. 31 4.2
BC130475-1|AAI30476.1| 536|Homo sapiens chromosome 3 open readi... 30 7.3
AK057421-1|BAB71478.1| 536|Homo sapiens protein ( Homo sapiens ... 30 7.3
AB082525-1|BAC02703.1| 1117|Homo sapiens KIAA1994 protein protein. 30 7.3
BC025276-1|AAH25276.2| 556|Homo sapiens UTP18, small subunit (S... 30 9.7
>D32143-1|BAA06874.1| 206|Homo sapiens biliverdin-IXbeta reductase
I protein.
Length = 206
Score = 144 bits (350), Expect = 2e-34
Identities = 71/171 (41%), Positives = 102/171 (59%)
Frame = -3
Query: 723 LKKGLEVRAFVRDPAKLPEHLKDKVEIVKGNVLEPDSVHEAVEGTDAVVITLGTRNDLAP 544
++ G EV VRD ++LP +V G+VL+ V + V G DAV++ LGTRNDL+P
Sbjct: 24 VQAGYEVTVLVRDSSRLPSEGPRPAHVVVGDVLQAADVDKTVAGQDAVIVLLGTRNDLSP 83
Query: 543 TSDLSEGTKNIIDAMRAKNVKTVSACLSAFLFYEQEKVPPIFVNLNEDHKRMFQALKDSG 364
T+ +SEG +NI+ AM+A V V AC SAFL ++ KVPP + +DH RM + L++SG
Sbjct: 84 TTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPTKVPPRLQAVTDDHIRMHKVLRESG 143
Query: 363 LNWIAAFPPHFTDDPSREMIIEVNPEKTPGRTIAKCDLGTFLVDALSEPKY 211
L ++A PPH D P + P R I+K DLG F++ L+ +Y
Sbjct: 144 LKYVAVMPPHIGDQPLTGAYTVTLDGRGPSRVISKHDLGHFMLRCLTTDEY 194
>D26308-1|BAA05370.1| 206|Homo sapiens NADPH-flavin reductase
protein.
Length = 206
Score = 144 bits (350), Expect = 2e-34
Identities = 71/171 (41%), Positives = 102/171 (59%)
Frame = -3
Query: 723 LKKGLEVRAFVRDPAKLPEHLKDKVEIVKGNVLEPDSVHEAVEGTDAVVITLGTRNDLAP 544
++ G EV VRD ++LP +V G+VL+ V + V G DAV++ LGTRNDL+P
Sbjct: 24 VQAGYEVTVLVRDSSRLPSEGPRPAHVVVGDVLQAADVDKTVAGQDAVIVLLGTRNDLSP 83
Query: 543 TSDLSEGTKNIIDAMRAKNVKTVSACLSAFLFYEQEKVPPIFVNLNEDHKRMFQALKDSG 364
T+ +SEG +NI+ AM+A V V AC SAFL ++ KVPP + +DH RM + L++SG
Sbjct: 84 TTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPTKVPPRLQAVTDDHIRMHKVLRESG 143
Query: 363 LNWIAAFPPHFTDDPSREMIIEVNPEKTPGRTIAKCDLGTFLVDALSEPKY 211
L ++A PPH D P + P R I+K DLG F++ L+ +Y
Sbjct: 144 LKYVAVMPPHIGDQPLTGAYTVTLDGRGPSRVISKHDLGHFMLRCLTTDEY 194
>BC109371-1|AAI09372.1| 206|Homo sapiens biliverdin reductase B
(flavin reductase (NADPH)) protein.
Length = 206
Score = 144 bits (350), Expect = 2e-34
Identities = 71/171 (41%), Positives = 102/171 (59%)
Frame = -3
Query: 723 LKKGLEVRAFVRDPAKLPEHLKDKVEIVKGNVLEPDSVHEAVEGTDAVVITLGTRNDLAP 544
++ G EV VRD ++LP +V G+VL+ V + V G DAV++ LGTRNDL+P
Sbjct: 24 VQAGYEVTVLVRDSSRLPSEGPRPAHVVVGDVLQAADVDKTVAGQDAVIVLLGTRNDLSP 83
Query: 543 TSDLSEGTKNIIDAMRAKNVKTVSACLSAFLFYEQEKVPPIFVNLNEDHKRMFQALKDSG 364
T+ +SEG +NI+ AM+A V V AC SAFL ++ KVPP + +DH RM + L++SG
Sbjct: 84 TTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPTKVPPRLQAVTDDHIRMHKVLRESG 143
Query: 363 LNWIAAFPPHFTDDPSREMIIEVNPEKTPGRTIAKCDLGTFLVDALSEPKY 211
L ++A PPH D P + P R I+K DLG F++ L+ +Y
Sbjct: 144 LKYVAVMPPHIGDQPLTGAYTVTLDGRGPSRVISKHDLGHFMLRCLTTDEY 194
>AY340485-1|AAP88933.1| 206|Homo sapiens biliverdin reductase B
(flavin reductase (NADPH)) protein.
Length = 206
Score = 144 bits (350), Expect = 2e-34
Identities = 71/171 (41%), Positives = 102/171 (59%)
Frame = -3
Query: 723 LKKGLEVRAFVRDPAKLPEHLKDKVEIVKGNVLEPDSVHEAVEGTDAVVITLGTRNDLAP 544
++ G EV VRD ++LP +V G+VL+ V + V G DAV++ LGTRNDL+P
Sbjct: 24 VQAGYEVTVLVRDSSRLPSEGPRPAHVVVGDVLQAADVDKTVAGQDAVIVLLGTRNDLSP 83
Query: 543 TSDLSEGTKNIIDAMRAKNVKTVSACLSAFLFYEQEKVPPIFVNLNEDHKRMFQALKDSG 364
T+ +SEG +NI+ AM+A V V AC SAFL ++ KVPP + +DH RM + L++SG
Sbjct: 84 TTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPTKVPPRLQAVTDDHIRMHKVLRESG 143
Query: 363 LNWIAAFPPHFTDDPSREMIIEVNPEKTPGRTIAKCDLGTFLVDALSEPKY 211
L ++A PPH D P + P R I+K DLG F++ L+ +Y
Sbjct: 144 LKYVAVMPPHIGDQPLTGAYTVTLDGRGPSRVISKHDLGHFMLRCLTTDEY 194
>AJ004862-1|CAA06167.1| 1283|Homo sapiens mucin protein.
Length = 1283
Score = 32.7 bits (71), Expect = 1.4
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +3
Query: 186 CRCQ*LPCSTWVRKARPLGMCRGRTWQWSCP 278
CRC PC+T+V +R G+ W CP
Sbjct: 253 CRCPTCPCATFVEYSRQCAHAGGQPRNWRCP 283
>AF107890-1|AAG33673.1| 1594|Homo sapiens mucin 5B protein.
Length = 1594
Score = 32.7 bits (71), Expect = 1.4
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +3
Query: 186 CRCQ*LPCSTWVRKARPLGMCRGRTWQWSCP 278
CRC PC+T+V +R G+ W CP
Sbjct: 292 CRCPTCPCATFVEYSRQCAHAGGQPRNWRCP 322
>AF086604-1|AAC67545.1| 1321|Homo sapiens mucin protein.
Length = 1321
Score = 32.7 bits (71), Expect = 1.4
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +3
Query: 186 CRCQ*LPCSTWVRKARPLGMCRGRTWQWSCP 278
CRC PC+T+V +R G+ W CP
Sbjct: 292 CRCPTCPCATFVEYSRQCAHAGGQPRNWRCP 322
>BC150265-1|AAI50266.1| 1481|Homo sapiens CRKRS protein protein.
Length = 1481
Score = 32.3 bits (70), Expect = 1.8
Identities = 20/67 (29%), Positives = 26/67 (38%)
Frame = -1
Query: 353 SPRFRHTSQTTQAEXXXXX*TLRRHRAGPLPSATSAHS*WTRFPNPSTTRQSLASAMCPK 174
SP HTS + T RR P SA+ TR P+P + RQ S +
Sbjct: 249 SPSRSHTSSNYDSYKKSPGSTSRRQSVSPPYKEPSAYQSSTRSPSPYSRRQRSVSPYSRR 308
Query: 173 NEGTYSR 153
+Y R
Sbjct: 309 RSSSYER 315
>AF227198-1|AAF36401.1| 1490|Homo sapiens CrkRS protein.
Length = 1490
Score = 32.3 bits (70), Expect = 1.8
Identities = 20/67 (29%), Positives = 26/67 (38%)
Frame = -1
Query: 353 SPRFRHTSQTTQAEXXXXX*TLRRHRAGPLPSATSAHS*WTRFPNPSTTRQSLASAMCPK 174
SP HTS + T RR P SA+ TR P+P + RQ S +
Sbjct: 249 SPSRSHTSSNYDSYKKSPGSTSRRQSVSPPYKEPSAYQSSTRSPSPYSRRQRSVSPYSRR 308
Query: 173 NEGTYSR 153
+Y R
Sbjct: 309 RSSSYER 315
>AB020711-1|BAA74927.2| 1535|Homo sapiens KIAA0904 protein protein.
Length = 1535
Score = 32.3 bits (70), Expect = 1.8
Identities = 20/67 (29%), Positives = 26/67 (38%)
Frame = -1
Query: 353 SPRFRHTSQTTQAEXXXXX*TLRRHRAGPLPSATSAHS*WTRFPNPSTTRQSLASAMCPK 174
SP HTS + T RR P SA+ TR P+P + RQ S +
Sbjct: 303 SPSRSHTSSNYDSYKKSPGSTSRRQSVSPPYKEPSAYQSSTRSPSPYSRRQRSVSPYSRR 362
Query: 173 NEGTYSR 153
+Y R
Sbjct: 363 RSSSYER 369
>Y16787-1|CAA76383.1| 416|Homo sapiens type I hair keratin 1
protein.
Length = 416
Score = 31.1 bits (67), Expect = 4.2
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +2
Query: 593 PSTASCTESGSRTFPLTISTLSLRCSGSFAGS 688
PS SCT G+ P +S + C GSF GS
Sbjct: 24 PSCHSCTLPGACNIPANVSNCNWFCEGSFNGS 55
>X86570-1|CAA60378.1| 416|Homo sapiens type I keratin protein.
Length = 416
Score = 31.1 bits (67), Expect = 4.2
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +2
Query: 593 PSTASCTESGSRTFPLTISTLSLRCSGSFAGS 688
PS SCT G+ P +S + C GSF GS
Sbjct: 24 PSCHSCTLPGACNIPANVSNCNWFCEGSFNGS 55
>BC114468-1|AAI14469.1| 416|Homo sapiens keratin 31 protein.
Length = 416
Score = 31.1 bits (67), Expect = 4.2
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +2
Query: 593 PSTASCTESGSRTFPLTISTLSLRCSGSFAGS 688
PS SCT G+ P +S + C GSF GS
Sbjct: 24 PSCHSCTLPGACNIPANVSNCNWFCEGSFNGS 55
>BC130475-1|AAI30476.1| 536|Homo sapiens chromosome 3 open reading
frame 30 protein.
Length = 536
Score = 30.3 bits (65), Expect = 7.3
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = -2
Query: 391 NVPGSERQRLKLDRRVSATLHRRPKPRNDY 302
+VP +R +++DRR+S + RR + DY
Sbjct: 247 SVPSDQRPSVQIDRRMSGKVRRRSSEKTDY 276
>AK057421-1|BAB71478.1| 536|Homo sapiens protein ( Homo sapiens
cDNA FLJ32859 fis, clone TESTI2003574, weakly similar to
A-KINASE ANCHOR PROTEIN 150. ).
Length = 536
Score = 30.3 bits (65), Expect = 7.3
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = -2
Query: 391 NVPGSERQRLKLDRRVSATLHRRPKPRNDY 302
+VP +R +++DRR+S + RR + DY
Sbjct: 247 SVPSDQRPSVQIDRRMSGKVRRRSSEKTDY 276
>AB082525-1|BAC02703.1| 1117|Homo sapiens KIAA1994 protein protein.
Length = 1117
Score = 30.3 bits (65), Expect = 7.3
Identities = 18/51 (35%), Positives = 27/51 (52%)
Frame = +2
Query: 215 LGSESASTRNVPRSHLAMVLPGVFSGFTSIIISRLGSSVKCGGNAAIQFKP 367
LG+ + ST N+P + V PGV SG I+S +G+ +AA+ P
Sbjct: 377 LGNVNISTSNIPSAAGVSVGPGVTSGVNVNILSGMGNGT-ISSSAAVSSVP 426
>BC025276-1|AAH25276.2| 556|Homo sapiens UTP18, small subunit (SSU)
processome component, homolog (yeast) protein.
Length = 556
Score = 29.9 bits (64), Expect = 9.7
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = -2
Query: 388 VPGSERQRLKLDRRVSATLHRRPKPRNDY 302
+P R+R+KLDRR A R+P R D+
Sbjct: 1 MPPERRRRMKLDRRTGAKPKRKPGMRPDW 29
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,493,903
Number of Sequences: 237096
Number of extensions: 2442651
Number of successful extensions: 8975
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 8729
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8971
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8567175942
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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