Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt10f20
(758 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF007191-1|AAC02269.1| 589|Homo sapiens intestinal mucin protein. 38 0.039
AF007197-1|AAB84381.1| 335|Homo sapiens mucin protein. 36 0.16
AF007193-1|AAC02271.1| 441|Homo sapiens mucin protein. 36 0.16
AJ298318-1|CAC83675.1| 1349|Homo sapiens mucin 5 protein. 36 0.21
AJ606308-1|CAE54436.1| 4262|Homo sapiens secreted mucin MUC17 pr... 35 0.28
AJ606307-1|CAE54435.1| 4493|Homo sapiens membrane mucin MUC17 pr... 35 0.28
BC126315-1|AAI26316.1| 1224|Homo sapiens MUC17 protein protein. 33 0.85
BC105737-1|AAI05738.1| 566|Homo sapiens chromosome 6 open readi... 33 0.85
BC105735-1|AAI05736.1| 566|Homo sapiens chromosome 6 open readi... 33 0.85
AL669830-8|CAI18008.1| 566|Homo sapiens chromosome 6 open readi... 33 0.85
AL663093-1|CAI17705.1| 566|Homo sapiens chromosome 6 open readi... 33 0.85
AY307931-1|AAQ73825.1| 336|Homo sapiens intestinal mucin MUC3B ... 33 1.1
BC107478-1|AAI07479.1| 416|Homo sapiens C6orf205 protein protein. 32 2.0
AF430017-1|AAL89737.1| 1029|Homo sapiens intestinal membrane muc... 32 2.0
AF016692-1|AAB71685.1| 648|Homo sapiens small intestinal mucin ... 32 2.0
AF414442-1|AAL65133.2|22152|Homo sapiens ovarian cancer related ... 32 2.6
AF361486-1|AAK74120.3| 6995|Homo sapiens mucin 16 protein. 32 2.6
X13403-1|CAA31767.1| 743|Homo sapiens protein ( Human mRNA for ... 31 3.4
BC052274-1|AAH52274.1| 743|Homo sapiens POU class 2 homeobox 1 ... 31 3.4
BC007388-1|AAH07388.1| 561|Homo sapiens POU2F1 protein protein. 31 3.4
BC003571-1|AAH03571.1| 743|Homo sapiens POU2F1 protein protein. 31 3.4
BC001664-1|AAH01664.1| 743|Homo sapiens POU2F1 protein protein. 31 3.4
AL136984-5|CAI15171.1| 561|Homo sapiens POU domain, class 2, tr... 31 3.4
AL136984-4|CAI15170.1| 741|Homo sapiens POU domain, class 2, tr... 31 3.4
AL136984-3|CAI15169.1| 743|Homo sapiens POU domain, class 2, tr... 31 3.4
AL136984-1|CAI15167.1| 755|Homo sapiens POU domain, class 2, tr... 31 3.4
X74955-1|CAA52910.1| 622|Homo sapiens mucin protein. 31 4.5
CR457114-1|CAG33395.1| 364|Homo sapiens HAVCR1 protein. 31 6.0
BC117674-1|AAI17675.2| 1240|Homo sapiens NFASC protein protein. 31 6.0
BC013325-1|AAH13325.1| 364|Homo sapiens HAVCR1 protein protein. 31 6.0
AY113189-1|AAM77920.1| 755|Homo sapiens OCT-1 protein protein. 31 6.0
AL391822-5|CAI14660.1| 1347|Homo sapiens neurofascin homolog (ch... 31 6.0
AL391822-3|CAI14659.1| 1240|Homo sapiens neurofascin homolog (ch... 31 6.0
AJ291390-1|CAC19572.1| 901|Homo sapiens MUC3B mucin protein. 31 6.0
Z72496-1|CAA96577.1| 3570|Homo sapiens mucin MUC5B protein. 30 7.9
AF007190-1|AAC02268.1| 513|Homo sapiens intestinal mucin protein. 30 7.9
>AF007191-1|AAC02269.1| 589|Homo sapiens intestinal mucin protein.
Length = 589
Score = 37.9 bits (84), Expect = 0.039
Identities = 38/115 (33%), Positives = 50/115 (43%), Gaps = 10/115 (8%)
Frame = +2
Query: 374 TNASSLITSVALA-PVEDSIGSFTTTAGAATIVLEPTD--TSSLITSV-ALAPVEDSITS 541
T L T VA V+ ++ S T T T + TD T SL+T++ + + +ITS
Sbjct: 327 TTMEPLSTIVATTGTVKTTVTSSTATFRETTTLTSTTDISTESLMTAMTSTTRLTSAITS 386
Query: 542 FTTTAGAATIVLEPTDTSSL------ITSVALAPVEDSITSFTTTARXCNNSLXT 688
TT T PT S+L I S L P D ITS TT + L T
Sbjct: 387 KTTLTSLKTTASRPTANSTLSSLTSSILSSTLVPSTDMITSHTTNLTRSSPLLAT 441
>AF007197-1|AAB84381.1| 335|Homo sapiens mucin protein.
Length = 335
Score = 35.9 bits (79), Expect = 0.16
Identities = 33/112 (29%), Positives = 51/112 (45%), Gaps = 11/112 (9%)
Frame = +2
Query: 395 TSVALAPVEDSIGSFTTTAGAATIVLEPTD---TSSLITSVALAP-VEDSITS-FTTTAG 559
++VA + + +T T L PT T S T+V+ P + SITS +T T+
Sbjct: 155 STVATTGTGQTTFTSSTATSPKTTTLTPTSDISTGSFKTAVSSTPPITSSITSTYTVTSM 214
Query: 560 AATIVLEPTDTSSL------ITSVALAPVEDSITSFTTTARXCNNSLXTHEN 697
T L PT T++L ++S P ++ITS TT + + T N
Sbjct: 215 TTTTPLGPTATNTLPSFTSSVSSSTPVPSTEAITSGTTNTTPLSTLVTTFSN 266
>AF007193-1|AAC02271.1| 441|Homo sapiens mucin protein.
Length = 441
Score = 35.9 bits (79), Expect = 0.16
Identities = 33/112 (29%), Positives = 51/112 (45%), Gaps = 11/112 (9%)
Frame = +2
Query: 395 TSVALAPVEDSIGSFTTTAGAATIVLEPTD---TSSLITSVALAP-VEDSITS-FTTTAG 559
++VA + + +T T L PT T S T+V+ P + SITS +T T+
Sbjct: 189 STVATTGTGQTTFTSSTATSPKTTTLTPTSDISTGSFKTAVSSTPPITSSITSTYTVTSM 248
Query: 560 AATIVLEPTDTSSL------ITSVALAPVEDSITSFTTTARXCNNSLXTHEN 697
T L PT T++L ++S P ++ITS TT + + T N
Sbjct: 249 TTTTPLGPTATNTLPSFTSSVSSSTPVPSTEAITSGTTNTTPLSTLVTTFSN 300
>AJ298318-1|CAC83675.1| 1349|Homo sapiens mucin 5 protein.
Length = 1349
Score = 35.5 bits (78), Expect = 0.21
Identities = 29/97 (29%), Positives = 44/97 (45%), Gaps = 1/97 (1%)
Frame = +2
Query: 374 TNASSLITSVALAPVEDSIGS-FTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTT 550
+ S+ TS AP + + TTT+ A T T+S I++ + + TS TT
Sbjct: 671 STTSAPTTSTTSAPTTSTTSTPQTTTSSAPTSSTTSAPTTSTISAPTTSTISAPTTS-TT 729
Query: 551 TAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTA 661
+A A+ PT TSS T+ + S TS T+
Sbjct: 730 SAPTASTTSAPTSTSSAPTTNTTSAPTTSTTSAPITS 766
Score = 34.3 bits (75), Expect = 0.48
Identities = 32/110 (29%), Positives = 46/110 (41%), Gaps = 5/110 (4%)
Frame = +2
Query: 374 TNASSLITSVALAPVEDSIGS---FTTTAGAATIVLEPTDTSSLITSVALAPVEDSITS- 541
+ S+ TS AP +I + TT+A A+ PT TSS T+ + S TS
Sbjct: 703 STTSAPTTSTISAPTTSTISAPTTSTTSAPTASTTSAPTSTSSAPTTNTTSAPTTSTTSA 762
Query: 542 -FTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTARXCNNSLXT 688
T+T A T T +S I+S + TS T++ S T
Sbjct: 763 PITSTISAPTTSTTSTPQTSTISSPTTSTTPTPQTSTTSSPTTSTTSAPT 812
>AJ606308-1|CAE54436.1| 4262|Homo sapiens secreted mucin MUC17
protein.
Length = 4262
Score = 35.1 bits (77), Expect = 0.28
Identities = 27/84 (32%), Positives = 44/84 (52%), Gaps = 2/84 (2%)
Frame = +2
Query: 443 TTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTAGAATIVLEPTDTSSLITS--VA 616
T++ A+T+ P DTS+ IT+ ++ S TTT G + + P++ S L+TS V+
Sbjct: 760 TSSEASTLSTTPLDTSTHITTST-----EASCSPTTTEGTSMPISTPSEGSPLLTSIPVS 814
Query: 617 LAPVEDSITSFTTTARXCNNSLXT 688
+ PV S +T +NS T
Sbjct: 815 ITPVTSPEASTLSTTPVDSNSPVT 838
Score = 33.9 bits (74), Expect = 0.64
Identities = 30/97 (30%), Positives = 51/97 (52%), Gaps = 3/97 (3%)
Frame = +2
Query: 377 NASSLITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTA 556
+ + L TS + ++ S TTT G + + P++ S L+TS+ PV SIT T+
Sbjct: 768 STTPLDTSTHITTSTEASCSPTTTEGTSMPISTPSEGSPLLTSI---PV--SITP-VTSP 821
Query: 557 GAATIVLEPTDTSSLITS---VALAPVEDSITSFTTT 658
A+T+ P D++S +T+ V+ +P TS T+
Sbjct: 822 EASTLSTTPVDSNSPVTTSTEVSSSPTPAEGTSMPTS 858
Score = 33.5 bits (73), Expect = 0.85
Identities = 33/149 (22%), Positives = 53/149 (35%), Gaps = 7/149 (4%)
Frame = -3
Query: 618 SATEVINDEVSVGSKTIV--AAPAVVVNDVIESSTGASATEVINDEVSVGSKTIVAAPAV 445
S T V++ E S S T V + P + S T A T + S G+ + + P V
Sbjct: 3348 STTPVVSSEASTLSTTPVDTSTPVTTSTEASLSPTTAEGTSIPTSSPSEGTTPLASMP-V 3406
Query: 444 VVNDPIESSTGASATEVINDEALVSSKXXXXXXXXXXXXXXXXXVLNTEAP-----QDLS 280
+ S +T ++ LV++ +E LS
Sbjct: 3407 STTPVVSSEVNTLSTTPVDSNTLVTTSTEASSSPTIAEGTSLPTSTTSEGSTPLSIMPLS 3466
Query: 279 TKILADAVPEAVIVTAPEAETAITTGSPT 193
T +A + + T + T +TT SPT
Sbjct: 3467 TTPVASSEASTLSTTPVDTSTPVTTSSPT 3495
Score = 32.3 bits (70), Expect = 2.0
Identities = 26/86 (30%), Positives = 46/86 (53%), Gaps = 4/86 (4%)
Frame = +2
Query: 413 PVEDSIGSFTTTAG--AATIVLEPTDTSSLITSVALAPVEDSITSFTTTAGAATIVLEPT 586
P+ + + S T A A+T+ P DTS+ +T+ A ++ +S TT G + + P+
Sbjct: 2693 PLTNILVSTTLLANSEASTLSTTPVDTSTPVTTSA-----EASSSPTTAEGTSMRISTPS 2747
Query: 587 DTSSLITSVALA--PVEDSITSFTTT 658
D S+ +TS+ ++ PV S S +T
Sbjct: 2748 DGSTPLTSILVSTLPVASSEASTVST 2773
Score = 32.3 bits (70), Expect = 2.0
Identities = 25/90 (27%), Positives = 42/90 (46%), Gaps = 2/90 (2%)
Frame = +2
Query: 395 TSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALA--PVEDSITSFTTTAGAAT 568
TS + ++ S TT G + + P+D S+ +TS+ ++ PV S S +T T
Sbjct: 2719 TSTPVTTSAEASSSPTTAEGTSMRISTPSDGSTPLTSILVSTLPVASSEASTVSTTAVDT 2778
Query: 569 IVLEPTDTSSLITSVALAPVEDSITSFTTT 658
+ P TS T + +P +TS T+
Sbjct: 2779 SI--PVTTS---TEASSSPTTAEVTSMPTS 2803
Score = 32.3 bits (70), Expect = 2.0
Identities = 26/95 (27%), Positives = 43/95 (45%), Gaps = 5/95 (5%)
Frame = +2
Query: 383 SSLITSVALAPVE----DSIGSFTTTAG-AATIVLEPTDTSSLITSVALAPVEDSITSFT 547
S+L+T+V ++P+ + +T G +T +L T S + + SITS
Sbjct: 3813 STLLTTVLISPISVMSPSEASTLSTPPGDTSTPLLTSTKAGSFSIPAEVTTIRISITSER 3872
Query: 548 TTAGAATIVLEPTDTSSLITSVALAPVEDSITSFT 652
+T +V TS S+A P D+ T+FT
Sbjct: 3873 STPLTTLLVSTTLPTSFPGASIASTPPLDTSTTFT 3907
>AJ606307-1|CAE54435.1| 4493|Homo sapiens membrane mucin MUC17
protein.
Length = 4493
Score = 35.1 bits (77), Expect = 0.28
Identities = 27/84 (32%), Positives = 44/84 (52%), Gaps = 2/84 (2%)
Frame = +2
Query: 443 TTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTAGAATIVLEPTDTSSLITS--VA 616
T++ A+T+ P DTS+ IT+ ++ S TTT G + + P++ S L+TS V+
Sbjct: 760 TSSEASTLSTTPLDTSTHITTST-----EASCSPTTTEGTSMPISTPSEGSPLLTSIPVS 814
Query: 617 LAPVEDSITSFTTTARXCNNSLXT 688
+ PV S +T +NS T
Sbjct: 815 ITPVTSPEASTLSTTPVDSNSPVT 838
Score = 33.9 bits (74), Expect = 0.64
Identities = 30/97 (30%), Positives = 51/97 (52%), Gaps = 3/97 (3%)
Frame = +2
Query: 377 NASSLITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTA 556
+ + L TS + ++ S TTT G + + P++ S L+TS+ PV SIT T+
Sbjct: 768 STTPLDTSTHITTSTEASCSPTTTEGTSMPISTPSEGSPLLTSI---PV--SITP-VTSP 821
Query: 557 GAATIVLEPTDTSSLITS---VALAPVEDSITSFTTT 658
A+T+ P D++S +T+ V+ +P TS T+
Sbjct: 822 EASTLSTTPVDSNSPVTTSTEVSSSPTPAEGTSMPTS 858
Score = 33.5 bits (73), Expect = 0.85
Identities = 33/149 (22%), Positives = 53/149 (35%), Gaps = 7/149 (4%)
Frame = -3
Query: 618 SATEVINDEVSVGSKTIV--AAPAVVVNDVIESSTGASATEVINDEVSVGSKTIVAAPAV 445
S T V++ E S S T V + P + S T A T + S G+ + + P V
Sbjct: 3348 STTPVVSSEASTLSTTPVDTSTPVTTSTEASLSPTTAEGTSIPTSSPSEGTTPLASMP-V 3406
Query: 444 VVNDPIESSTGASATEVINDEALVSSKXXXXXXXXXXXXXXXXXVLNTEAP-----QDLS 280
+ S +T ++ LV++ +E LS
Sbjct: 3407 STTPVVSSEVNTLSTTPVDSNTLVTTSTEASSSPTIAEGTSLPTSTTSEGSTPLSIMPLS 3466
Query: 279 TKILADAVPEAVIVTAPEAETAITTGSPT 193
T +A + + T + T +TT SPT
Sbjct: 3467 TTPVASSEASTLSTTPVDTSTPVTTSSPT 3495
Score = 32.3 bits (70), Expect = 2.0
Identities = 26/86 (30%), Positives = 46/86 (53%), Gaps = 4/86 (4%)
Frame = +2
Query: 413 PVEDSIGSFTTTAG--AATIVLEPTDTSSLITSVALAPVEDSITSFTTTAGAATIVLEPT 586
P+ + + S T A A+T+ P DTS+ +T+ A ++ +S TT G + + P+
Sbjct: 2693 PLTNILVSTTLLANSEASTLSTTPVDTSTPVTTSA-----EASSSPTTAEGTSMRISTPS 2747
Query: 587 DTSSLITSVALA--PVEDSITSFTTT 658
D S+ +TS+ ++ PV S S +T
Sbjct: 2748 DGSTPLTSILVSTLPVASSEASTVST 2773
Score = 32.3 bits (70), Expect = 2.0
Identities = 25/90 (27%), Positives = 42/90 (46%), Gaps = 2/90 (2%)
Frame = +2
Query: 395 TSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALA--PVEDSITSFTTTAGAAT 568
TS + ++ S TT G + + P+D S+ +TS+ ++ PV S S +T T
Sbjct: 2719 TSTPVTTSAEASSSPTTAEGTSMRISTPSDGSTPLTSILVSTLPVASSEASTVSTTAVDT 2778
Query: 569 IVLEPTDTSSLITSVALAPVEDSITSFTTT 658
+ P TS T + +P +TS T+
Sbjct: 2779 SI--PVTTS---TEASSSPTTAEVTSMPTS 2803
Score = 32.3 bits (70), Expect = 2.0
Identities = 26/95 (27%), Positives = 43/95 (45%), Gaps = 5/95 (5%)
Frame = +2
Query: 383 SSLITSVALAPVE----DSIGSFTTTAG-AATIVLEPTDTSSLITSVALAPVEDSITSFT 547
S+L+T+V ++P+ + +T G +T +L T S + + SITS
Sbjct: 3813 STLLTTVLISPISVMSPSEASTLSTPPGDTSTPLLTSTKAGSFSIPAEVTTIRISITSER 3872
Query: 548 TTAGAATIVLEPTDTSSLITSVALAPVEDSITSFT 652
+T +V TS S+A P D+ T+FT
Sbjct: 3873 STPLTTLLVSTTLPTSFPGASIASTPPLDTSTTFT 3907
>BC126315-1|AAI26316.1| 1224|Homo sapiens MUC17 protein protein.
Length = 1224
Score = 33.5 bits (73), Expect = 0.85
Identities = 33/149 (22%), Positives = 53/149 (35%), Gaps = 7/149 (4%)
Frame = -3
Query: 618 SATEVINDEVSVGSKTIV--AAPAVVVNDVIESSTGASATEVINDEVSVGSKTIVAAPAV 445
S T V++ E S S T V + P + S T A T + S G+ + + P V
Sbjct: 79 STTPVVSSEASTLSTTPVDTSTPVTTSTEASLSPTTAEGTSIPTSSPSEGTTPLASMP-V 137
Query: 444 VVNDPIESSTGASATEVINDEALVSSKXXXXXXXXXXXXXXXXXVLNTEAP-----QDLS 280
+ S +T ++ LV++ +E LS
Sbjct: 138 STTPVVSSEVNTLSTTPVDSNTLVTTSTEASSSPTIAEGTSLPTSTTSEGSTPLSIMPLS 197
Query: 279 TKILADAVPEAVIVTAPEAETAITTGSPT 193
T +A + + T + T +TT SPT
Sbjct: 198 TTPVASSEASTLSTTPVDTSTPVTTSSPT 226
Score = 32.3 bits (70), Expect = 2.0
Identities = 26/95 (27%), Positives = 43/95 (45%), Gaps = 5/95 (5%)
Frame = +2
Query: 383 SSLITSVALAPVE----DSIGSFTTTAG-AATIVLEPTDTSSLITSVALAPVEDSITSFT 547
S+L+T+V ++P+ + +T G +T +L T S + + SITS
Sbjct: 544 STLLTTVLISPISVMSPSEASTLSTPPGDTSTPLLTSTKAGSFSIPAEVTTIRISITSER 603
Query: 548 TTAGAATIVLEPTDTSSLITSVALAPVEDSITSFT 652
+T +V TS S+A P D+ T+FT
Sbjct: 604 STPLTTLLVSTTLPTSFPGASIASTPPLDTSTTFT 638
>BC105737-1|AAI05738.1| 566|Homo sapiens chromosome 6 open reading
frame 205 protein.
Length = 566
Score = 33.5 bits (73), Expect = 0.85
Identities = 38/153 (24%), Positives = 63/153 (41%)
Frame = +2
Query: 221 SASGAVTITASGTASARIFVLKSCGASVFKXXXXXXXXXXXXXXXXXXLELTNASSLITS 400
S +G T + S T S+ I + + +S TN+ S TS
Sbjct: 265 SGAGTATNSESSTVSSGISTVTNSESSTPSSGANTATNSESSTTSSGANTATNSDSSTTS 324
Query: 401 VALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTAGAATIVLE 580
+ +S S TT++GA+T T++ S TS + +S +S TT++G +T
Sbjct: 325 SGASTATNSESS-TTSSGAST----ATNSESSTTSSGASTATNSGSS-TTSSGTSTATNS 378
Query: 581 PTDTSSLITSVALAPVEDSITSFTTTARXCNNS 679
+ T S S A + +S +TA +S
Sbjct: 379 ESSTVSSGASTATTSESSTTSSGASTATNSESS 411
>BC105735-1|AAI05736.1| 566|Homo sapiens chromosome 6 open reading
frame 205 protein.
Length = 566
Score = 33.5 bits (73), Expect = 0.85
Identities = 38/153 (24%), Positives = 63/153 (41%)
Frame = +2
Query: 221 SASGAVTITASGTASARIFVLKSCGASVFKXXXXXXXXXXXXXXXXXXLELTNASSLITS 400
S +G T + S T S+ I + + +S TN+ S TS
Sbjct: 265 SGAGTATNSESSTVSSGISTVTNSESSTPSSGANTATNSESSTTSSGANTATNSDSSTTS 324
Query: 401 VALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTAGAATIVLE 580
+ +S S TT++GA+T T++ S TS + +S +S TT++G +T
Sbjct: 325 SGASTATNSESS-TTSSGAST----ATNSESSTTSSGASTATNSGSS-TTSSGTSTATNS 378
Query: 581 PTDTSSLITSVALAPVEDSITSFTTTARXCNNS 679
+ T S S A + +S +TA +S
Sbjct: 379 ESSTVSSGASTATTSESSTTSSGASTATNSESS 411
>AL669830-8|CAI18008.1| 566|Homo sapiens chromosome 6 open reading
frame 205 protein.
Length = 566
Score = 33.5 bits (73), Expect = 0.85
Identities = 38/153 (24%), Positives = 63/153 (41%)
Frame = +2
Query: 221 SASGAVTITASGTASARIFVLKSCGASVFKXXXXXXXXXXXXXXXXXXLELTNASSLITS 400
S +G T + S T S+ I + + +S TN+ S TS
Sbjct: 265 SGAGTATNSESSTVSSGISTVTNSESSTPSSGANTATNSESSTTSSGANTATNSDSSTTS 324
Query: 401 VALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTAGAATIVLE 580
+ +S S TT++GA+T T++ S TS + +S +S TT++G +T
Sbjct: 325 SGASTATNSESS-TTSSGAST----ATNSESSTTSSGASTATNSGSS-TTSSGTSTATNS 378
Query: 581 PTDTSSLITSVALAPVEDSITSFTTTARXCNNS 679
+ T S S A + +S +TA +S
Sbjct: 379 ESSTVSSGASTATTSESSTTSSGASTATNSESS 411
>AL663093-1|CAI17705.1| 566|Homo sapiens chromosome 6 open reading
frame 205 protein.
Length = 566
Score = 33.5 bits (73), Expect = 0.85
Identities = 38/153 (24%), Positives = 63/153 (41%)
Frame = +2
Query: 221 SASGAVTITASGTASARIFVLKSCGASVFKXXXXXXXXXXXXXXXXXXLELTNASSLITS 400
S +G T + S T S+ I + + +S TN+ S TS
Sbjct: 265 SGAGTATNSESSTVSSGISTVTNSESSTPSSGANTATNSESSTTSSGANTATNSDSSTTS 324
Query: 401 VALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTAGAATIVLE 580
+ +S S TT++GA+T T++ S TS + +S +S TT++G +T
Sbjct: 325 SGASTATNSESS-TTSSGAST----ATNSESSTTSSGASTATNSGSS-TTSSGTSTATNS 378
Query: 581 PTDTSSLITSVALAPVEDSITSFTTTARXCNNS 679
+ T S S A + +S +TA +S
Sbjct: 379 ESSTVSSGASTATTSESSTTSSGASTATNSESS 411
>AY307931-1|AAQ73825.1| 336|Homo sapiens intestinal mucin MUC3B
precursor protein.
Length = 336
Score = 33.1 bits (72), Expect = 1.1
Identities = 27/77 (35%), Positives = 40/77 (51%), Gaps = 8/77 (10%)
Frame = +2
Query: 452 GAATIVLEPTDT-SSLITSV-ALAPVEDSITSFTTTAGAATIVLEPTDTSSL--ITSVAL 619
G+ + PT ++L T+V + +P+ +ITS T T PT T++L +TS L
Sbjct: 235 GSIHTTMSPTPVFTTLKTAVTSTSPITSTITSTNTVTSMTTTTSRPTATNTLSSLTSSIL 294
Query: 620 ----APVEDSITSFTTT 658
AP + ITS TTT
Sbjct: 295 SSTPAPNTEVITSHTTT 311
Score = 31.9 bits (69), Expect = 2.6
Identities = 32/100 (32%), Positives = 46/100 (46%), Gaps = 6/100 (6%)
Frame = +2
Query: 374 TNASSLITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSL--ITSVAL----APVEDSI 535
T + +TS + P+ +I S T T PT T++L +TS L AP + I
Sbjct: 248 TTLKTAVTSTS--PITSTITSTNTVTSMTTTTSRPTATNTLSSLTSSILSSTPAPNTEVI 305
Query: 536 TSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTT 655
TS TTT T S+L+T++ A + TS TT
Sbjct: 306 TSHTTTT---------TPPSTLVTTLPTAIARSTPTSETT 336
>BC107478-1|AAI07479.1| 416|Homo sapiens C6orf205 protein protein.
Length = 416
Score = 32.3 bits (70), Expect = 2.0
Identities = 30/102 (29%), Positives = 49/102 (48%)
Frame = +2
Query: 374 TNASSLITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTT 553
TN+ S TS + +S S TT++GA+T T++ S TS + +S +S TT+
Sbjct: 166 TNSESSTTSSGASTATNSESS-TTSSGAST----ATNSESSTTSSGASTATNSGSS-TTS 219
Query: 554 AGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTARXCNNS 679
+G +T + T S S A + +S +TA +S
Sbjct: 220 SGTSTATNSESSTVSSGASTATTSESSTTSSGASTATNSESS 261
>AF430017-1|AAL89737.1| 1029|Homo sapiens intestinal membrane mucin
MUC17 protein.
Length = 1029
Score = 32.3 bits (70), Expect = 2.0
Identities = 26/95 (27%), Positives = 43/95 (45%), Gaps = 5/95 (5%)
Frame = +2
Query: 383 SSLITSVALAPVE----DSIGSFTTTAG-AATIVLEPTDTSSLITSVALAPVEDSITSFT 547
S+L+T+V ++P+ + +T G +T +L T S + + SITS
Sbjct: 349 STLLTTVLISPISVMSPSEASTLSTPPGDTSTPLLTSTKAGSFSIPAEVTTIRISITSER 408
Query: 548 TTAGAATIVLEPTDTSSLITSVALAPVEDSITSFT 652
+T +V TS S+A P D+ T+FT
Sbjct: 409 STPLTTLLVSTTLPTSFPGASIASTPPLDTSTTFT 443
>AF016692-1|AAB71685.1| 648|Homo sapiens small intestinal mucin
MUC3 protein.
Length = 648
Score = 32.3 bits (70), Expect = 2.0
Identities = 26/95 (27%), Positives = 43/95 (45%), Gaps = 5/95 (5%)
Frame = +2
Query: 383 SSLITSVALAPVE----DSIGSFTTTAG-AATIVLEPTDTSSLITSVALAPVEDSITSFT 547
S+L+T+V ++P+ + +T G +T +L T S + + SITS
Sbjct: 349 STLLTTVLISPISVMSPSEASTLSTPPGDTSTPLLTSTKAGSFSIPAEVTTIRISITSER 408
Query: 548 TTAGAATIVLEPTDTSSLITSVALAPVEDSITSFT 652
+T +V TS S+A P D+ T+FT
Sbjct: 409 STPLTTLLVSTTLPTSFPGASIASTPPLDTSTTFT 443
>AF414442-1|AAL65133.2|22152|Homo sapiens ovarian cancer related tumor
marker CA125 protein.
Length = 22152
Score = 31.9 bits (69), Expect = 2.6
Identities = 28/88 (31%), Positives = 38/88 (43%)
Frame = +2
Query: 395 TSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTAGAATIV 574
TS + S+G TT AT T TS+L +V+ A S S TT T+
Sbjct: 11860 TSTMIPTSTLSLGLLETTGLLATSSSAETSTSTLTLTVSPAVSGLSSASITTDK-PQTVT 11918
Query: 575 LEPTDTSSLITSVALAPVEDSITSFTTT 658
T+TS +TSV ++T T T
Sbjct: 11919 SWNTETSPSVTSVGPPEFSRTVTGTTMT 11946
Score = 31.1 bits (67), Expect = 4.5
Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 3/65 (4%)
Frame = +2
Query: 413 PVEDSIGSFTTTAGAATIVLEP---TDTSSLITSVALAPVEDSITSFTTTAGAATIVLEP 583
PV + SF+ ++ AT V+ T+ SS + + + +TS T++GAAT P
Sbjct: 11702 PVSRTTSSFSHSSPDATPVMATSPRTEASSAVLTTISPGAPEMVTSQITSSGAATSTTVP 11761
Query: 584 TDTSS 598
T T S
Sbjct: 11762 TLTHS 11766
>AF361486-1|AAK74120.3| 6995|Homo sapiens mucin 16 protein.
Length = 6995
Score = 31.9 bits (69), Expect = 2.6
Identities = 28/88 (31%), Positives = 38/88 (43%)
Frame = +2
Query: 395 TSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTAGAATIV 574
TS + S+G TT AT T TS+L +V+ A S S TT T+
Sbjct: 3564 TSTMIPTSTLSLGLLETTGLLATSSSAETSTSTLTLTVSPAVSGLSSASITTDK-PQTVT 3622
Query: 575 LEPTDTSSLITSVALAPVEDSITSFTTT 658
T+TS +TSV ++T T T
Sbjct: 3623 SWNTETSPSVTSVGPPEFSRTVTGTTMT 3650
Score = 31.1 bits (67), Expect = 4.5
Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 3/65 (4%)
Frame = +2
Query: 413 PVEDSIGSFTTTAGAATIVLEP---TDTSSLITSVALAPVEDSITSFTTTAGAATIVLEP 583
PV + SF+ ++ AT V+ T+ SS + + + +TS T++GAAT P
Sbjct: 3406 PVSRTTSSFSHSSPDATPVMATSPRTEASSAVLTTISPGAPEMVTSQITSSGAATSTTVP 3465
Query: 584 TDTSS 598
T T S
Sbjct: 3466 TLTHS 3470
>X13403-1|CAA31767.1| 743|Homo sapiens protein ( Human mRNA for
octamer-binding protein Oct-1. ).
Length = 743
Score = 31.5 bits (68), Expect = 3.4
Identities = 21/90 (23%), Positives = 42/90 (46%)
Frame = +2
Query: 392 ITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTAGAATI 571
+TS A+ + + S TT+ AT++ SS +TS +L+P + S + + A+
Sbjct: 484 LTSAAVTNLSVTGTSDTTSNNTATVISTAPPASSAVTSPSLSPSPSASASTSEASSASET 543
Query: 572 VLEPTDTSSLITSVALAPVEDSITSFTTTA 661
T ++ L + + + V + + T A
Sbjct: 544 STTQTTSTPLSSPLGTSQVMVTASGLQTAA 573
>BC052274-1|AAH52274.1| 743|Homo sapiens POU class 2 homeobox 1
protein.
Length = 743
Score = 31.5 bits (68), Expect = 3.4
Identities = 21/90 (23%), Positives = 42/90 (46%)
Frame = +2
Query: 392 ITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTAGAATI 571
+TS A+ + + S TT+ AT++ SS +TS +L+P + S + + A+
Sbjct: 484 LTSAAVTNLSVTGTSDTTSNNTATVISTAPPASSAVTSPSLSPSPSASASTSEASSASET 543
Query: 572 VLEPTDTSSLITSVALAPVEDSITSFTTTA 661
T ++ L + + + V + + T A
Sbjct: 544 STTQTTSTPLSSPLGTSQVMVTASGLQTAA 573
>BC007388-1|AAH07388.1| 561|Homo sapiens POU2F1 protein protein.
Length = 561
Score = 31.5 bits (68), Expect = 3.4
Identities = 21/90 (23%), Positives = 42/90 (46%)
Frame = +2
Query: 392 ITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTAGAATI 571
+TS A+ + + S TT+ AT++ SS +TS +L+P + S + + A+
Sbjct: 392 LTSAAVTNLSVTGTSDTTSNNTATVISTAPPASSAVTSPSLSPSPSASASTSEASSASET 451
Query: 572 VLEPTDTSSLITSVALAPVEDSITSFTTTA 661
T ++ L + + + V + + T A
Sbjct: 452 STTQTTSTPLSSPLGTSQVMVTASGLQTAA 481
>BC003571-1|AAH03571.1| 743|Homo sapiens POU2F1 protein protein.
Length = 743
Score = 31.5 bits (68), Expect = 3.4
Identities = 21/90 (23%), Positives = 42/90 (46%)
Frame = +2
Query: 392 ITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTAGAATI 571
+TS A+ + + S TT+ AT++ SS +TS +L+P + S + + A+
Sbjct: 484 LTSAAVTNLSVTGTSDTTSNNTATVISTAPPASSAVTSPSLSPSPSASASTSEASSASET 543
Query: 572 VLEPTDTSSLITSVALAPVEDSITSFTTTA 661
T ++ L + + + V + + T A
Sbjct: 544 STTQTTSTPLSSPLGTSQVMVTASGLQTAA 573
>BC001664-1|AAH01664.1| 743|Homo sapiens POU2F1 protein protein.
Length = 743
Score = 31.5 bits (68), Expect = 3.4
Identities = 21/90 (23%), Positives = 42/90 (46%)
Frame = +2
Query: 392 ITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTAGAATI 571
+TS A+ + + S TT+ AT++ SS +TS +L+P + S + + A+
Sbjct: 484 LTSAAVTNLSVTGTSDTTSNNTATVISTAPPASSAVTSPSLSPSPSASASTSEASSASET 543
Query: 572 VLEPTDTSSLITSVALAPVEDSITSFTTTA 661
T ++ L + + + V + + T A
Sbjct: 544 STTQTTSTPLSSPLGTSQVMVTASGLQTAA 573
>AL136984-5|CAI15171.1| 561|Homo sapiens POU domain, class 2,
transcription factor 1 protein.
Length = 561
Score = 31.5 bits (68), Expect = 3.4
Identities = 21/90 (23%), Positives = 42/90 (46%)
Frame = +2
Query: 392 ITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTAGAATI 571
+TS A+ + + S TT+ AT++ SS +TS +L+P + S + + A+
Sbjct: 392 LTSAAVTNLSVTGTSDTTSNNTATVISTAPPASSAVTSPSLSPSPSASASTSEASSASET 451
Query: 572 VLEPTDTSSLITSVALAPVEDSITSFTTTA 661
T ++ L + + + V + + T A
Sbjct: 452 STTQTTSTPLSSPLGTSQVMVTASGLQTAA 481
>AL136984-4|CAI15170.1| 741|Homo sapiens POU domain, class 2,
transcription factor 1 protein.
Length = 741
Score = 31.5 bits (68), Expect = 3.4
Identities = 21/90 (23%), Positives = 42/90 (46%)
Frame = +2
Query: 392 ITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTAGAATI 571
+TS A+ + + S TT+ AT++ SS +TS +L+P + S + + A+
Sbjct: 482 LTSAAVTNLSVTGTSDTTSNNTATVISTAPPASSAVTSPSLSPSPSASASTSEASSASET 541
Query: 572 VLEPTDTSSLITSVALAPVEDSITSFTTTA 661
T ++ L + + + V + + T A
Sbjct: 542 STTQTTSTPLSSPLGTSQVMVTASGLQTAA 571
>AL136984-3|CAI15169.1| 743|Homo sapiens POU domain, class 2,
transcription factor 1 protein.
Length = 743
Score = 31.5 bits (68), Expect = 3.4
Identities = 21/90 (23%), Positives = 42/90 (46%)
Frame = +2
Query: 392 ITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTAGAATI 571
+TS A+ + + S TT+ AT++ SS +TS +L+P + S + + A+
Sbjct: 484 LTSAAVTNLSVTGTSDTTSNNTATVISTAPPASSAVTSPSLSPSPSASASTSEASSASET 543
Query: 572 VLEPTDTSSLITSVALAPVEDSITSFTTTA 661
T ++ L + + + V + + T A
Sbjct: 544 STTQTTSTPLSSPLGTSQVMVTASGLQTAA 573
>AL136984-1|CAI15167.1| 755|Homo sapiens POU domain, class 2,
transcription factor 1 protein.
Length = 755
Score = 31.5 bits (68), Expect = 3.4
Identities = 21/90 (23%), Positives = 42/90 (46%)
Frame = +2
Query: 392 ITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTAGAATI 571
+TS A+ + + S TT+ AT++ SS +TS +L+P + S + + A+
Sbjct: 496 LTSAAVTNLSVTGTSDTTSNNTATVISTAPPASSAVTSPSLSPSPSASASTSEASSASET 555
Query: 572 VLEPTDTSSLITSVALAPVEDSITSFTTTA 661
T ++ L + + + V + + T A
Sbjct: 556 STTQTTSTPLSSPLGTSQVMVTASGLQTAA 585
>X74955-1|CAA52910.1| 622|Homo sapiens mucin protein.
Length = 622
Score = 31.1 bits (67), Expect = 4.5
Identities = 20/93 (21%), Positives = 37/93 (39%)
Frame = +2
Query: 383 SSLITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTAGA 562
+ L T+ S + ++T G I+ EP+ T+++ S + T
Sbjct: 253 TELTTTATTTASTGSTATLSSTPGTTWILTEPSTTATVTVPTGSTATASSTQATAGTPHV 312
Query: 563 ATIVLEPTDTSSLITSVALAPVEDSITSFTTTA 661
+T PT TSS T + ++ + +TA
Sbjct: 313 STTATTPTVTSSKATPSSSPGTATALPALRSTA 345
>CR457114-1|CAG33395.1| 364|Homo sapiens HAVCR1 protein.
Length = 364
Score = 30.7 bits (66), Expect = 6.0
Identities = 21/86 (24%), Positives = 42/86 (48%), Gaps = 3/86 (3%)
Frame = +2
Query: 401 VALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTAGAATIVLE 580
V P+ ++ + TT + T+ PT T+ +T+V V +++ TTT T+ +
Sbjct: 129 VTTTPIVTTVPTVTTVRTSTTV---PTTTTVPMTTVPTTTVPTTMSIPTTTTVLTTMTVS 185
Query: 581 PT---DTSSLITSVALAPVEDSITSF 649
T T++ I + PV ++++F
Sbjct: 186 TTTSVPTTTSIPTTTSVPVTTTVSTF 211
>BC117674-1|AAI17675.2| 1240|Homo sapiens NFASC protein protein.
Length = 1240
Score = 30.7 bits (66), Expect = 6.0
Identities = 23/76 (30%), Positives = 30/76 (39%)
Frame = +2
Query: 425 SIGSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTAGAATIVLEPTDTSSLI 604
++ S TA AAT + +A T+ TTTA A T P T+S
Sbjct: 942 AVSSTDATAIAATTEATTVPIIPTVAPTTIATTTTVATTTTTTAAATTTTESPPTTTSGT 1001
Query: 605 TSVALAPVEDSITSFT 652
AP E SI + T
Sbjct: 1002 KIHESAPDEQSIWNVT 1017
>BC013325-1|AAH13325.1| 364|Homo sapiens HAVCR1 protein protein.
Length = 364
Score = 30.7 bits (66), Expect = 6.0
Identities = 21/86 (24%), Positives = 42/86 (48%), Gaps = 3/86 (3%)
Frame = +2
Query: 401 VALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTAGAATIVLE 580
V P+ ++ + TT + T+ PT T+ +T+V V +++ TTT T+ +
Sbjct: 129 VTTTPIVTTVPTVTTVRTSTTV---PTTTTVPMTTVPTTTVPTTMSIPTTTTVLTTMTVS 185
Query: 581 PT---DTSSLITSVALAPVEDSITSF 649
T T++ I + PV ++++F
Sbjct: 186 TTTSVPTTTSIPTTTSVPVTTTVSTF 211
>AY113189-1|AAM77920.1| 755|Homo sapiens OCT-1 protein protein.
Length = 755
Score = 30.7 bits (66), Expect = 6.0
Identities = 21/90 (23%), Positives = 42/90 (46%)
Frame = +2
Query: 392 ITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTAGAATI 571
+TS A+ + + S TT+ AT++ SS +TS +L+P + S + + A+
Sbjct: 496 LTSAAVTNLSVTGTSDTTSNNTATVISTAPPASSAVTSPSLSPSPSASASTSEASSASET 555
Query: 572 VLEPTDTSSLITSVALAPVEDSITSFTTTA 661
T ++ L + + + V + + T A
Sbjct: 556 STIQTTSTPLSSPLGTSQVMVTASGLQTAA 585
>AL391822-5|CAI14660.1| 1347|Homo sapiens neurofascin homolog
(chicken) protein.
Length = 1347
Score = 30.7 bits (66), Expect = 6.0
Identities = 23/76 (30%), Positives = 30/76 (39%)
Frame = +2
Query: 425 SIGSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTAGAATIVLEPTDTSSLI 604
++ S TA AAT + +A T+ TTTA A T P T+S
Sbjct: 1049 AVSSTDATAIAATTEATTVPIIPTVAPTTIATTTTVATTTTTTAAATTTTESPPTTTSGT 1108
Query: 605 TSVALAPVEDSITSFT 652
AP E SI + T
Sbjct: 1109 KIHESAPDEQSIWNVT 1124
>AL391822-3|CAI14659.1| 1240|Homo sapiens neurofascin homolog
(chicken) protein.
Length = 1240
Score = 30.7 bits (66), Expect = 6.0
Identities = 23/76 (30%), Positives = 30/76 (39%)
Frame = +2
Query: 425 SIGSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTAGAATIVLEPTDTSSLI 604
++ S TA AAT + +A T+ TTTA A T P T+S
Sbjct: 942 AVSSTDATAIAATTEATTVPIIPTVAPTTIATTTTVATTTTTTAAATTTTESPPTTTSGT 1001
Query: 605 TSVALAPVEDSITSFT 652
AP E SI + T
Sbjct: 1002 KIHESAPDEQSIWNVT 1017
>AJ291390-1|CAC19572.1| 901|Homo sapiens MUC3B mucin protein.
Length = 901
Score = 30.7 bits (66), Expect = 6.0
Identities = 33/101 (32%), Positives = 43/101 (42%), Gaps = 7/101 (6%)
Frame = +2
Query: 380 ASSLITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSV------ALAPVEDSI-T 538
+SS I S + FTT T P+ SSL T + L P+ S T
Sbjct: 21 SSSTIHSTVSSSTTAITSPFTTAETGVTST--PSSPSSLSTDIPTTSLRTLTPLSLSTST 78
Query: 539 SFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTA 661
S TTT +I PTD SSL T + + SI S T++
Sbjct: 79 SLTTTTDLPSI---PTDISSLPTPIHIISSSPSIQSTETSS 116
>Z72496-1|CAA96577.1| 3570|Homo sapiens mucin MUC5B protein.
Length = 3570
Score = 30.3 bits (65), Expect = 7.9
Identities = 21/81 (25%), Positives = 37/81 (45%)
Frame = +2
Query: 383 SSLITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTAGA 562
+ L T+ S + ++T G I+ EP+ T+++ AP + T+ +T A A
Sbjct: 3038 TELTTTATTTASTGSTATLSSTPGTTWILTEPSTTATV-----TAPPGSTATASSTQATA 3092
Query: 563 ATIVLEPTDTSSLITSVALAP 625
T + T T+ +TS P
Sbjct: 3093 GTPHVSTTATTPTVTSSKATP 3113
>AF007190-1|AAC02268.1| 513|Homo sapiens intestinal mucin protein.
Length = 513
Score = 30.3 bits (65), Expect = 7.9
Identities = 23/98 (23%), Positives = 37/98 (37%), Gaps = 2/98 (2%)
Frame = +2
Query: 371 LTNASSLITSVALA--PVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSF 544
+T+ S +TS L P S S + + A T E + T+ E ++
Sbjct: 264 ITSTDSTLTSSLLTTFPSTYSFSSSMSASSAGTTHTETISSLPASTNTIHTTAESALAPT 323
Query: 545 TTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTT 658
TTT+ + +EP T+ T S +F T
Sbjct: 324 TTTSFTTSPTMEPPSTTVATTGTGQTTFPSSTATFLET 361
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,966,353
Number of Sequences: 237096
Number of extensions: 1349953
Number of successful extensions: 3382
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 2702
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3331
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9183116696
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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