Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmmt10f16
         (705 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC005288-1|AAH05288.1|  260|Homo sapiens TGF beta-inducible nucl...   332   7e-91
AY443419-1|AAS00024.1|  260|Homo sapiens TGF-beta inducible nucl...   332   7e-91
AJ012409-1|CAA10008.1|  260|Homo sapiens hypothetical protein pr...   332   7e-91
AF372458-1|AAK53761.1|  260|Homo sapiens hairy cell leukemia pro...   332   7e-91
AF077615-1|AAG43048.1|  260|Homo sapiens TGF beta inducible nucl...   332   7e-91

>BC005288-1|AAH05288.1|  260|Homo sapiens TGF beta-inducible nuclear
           protein 1 protein.
          Length = 260

 Score =  332 bits (816), Expect = 7e-91
 Identities = 151/182 (82%), Positives = 168/182 (92%)
 Frame = -1

Query: 705 EKVAEGALPVYXLDRDVQSRAKVLSNMIKQKRKEKAGKWDVPIPKVRAQADAEVFKVLKS 526
           EK  +GA+P Y LDR+ QSRAKVLSNMIKQKRKEKAGKW+VP+PKVRAQ + EV KV+++
Sbjct: 79  EKTPQGAVPAYLLDREGQSRAKVLSNMIKQKRKEKAGKWEVPLPKVRAQGETEVLKVIRT 138

Query: 525 GKSKRKAWKRMVTKVTFVGENFTRKPPKFERFIRPMALRFKKAHVTHPELKATFCLPIIG 346
           GK K+KAWKRMVTKV FVG+ FTRKPPK+ERFIRPM LRFKKAHVTHPELKATFCLPI+G
Sbjct: 139 GKRKKKAWKRMVTKVCFVGDGFTRKPPKYERFIRPMGLRFKKAHVTHPELKATFCLPILG 198

Query: 345 VKKNPSSQMYTSLGVITKGTVIEVNISELGLVTQAGKVVWGKYAQVTNNPENDGCINAVL 166
           VKKNPSS +YT+LGVITKGTVIEVN+SELGLVTQ GKV+WGKYAQVTNNPENDGCINAVL
Sbjct: 199 VKKNPSSPLYTTLGVITKGTVIEVNVSELGLVTQGGKVIWGKYAQVTNNPENDGCINAVL 258

Query: 165 LV 160
           LV
Sbjct: 259 LV 260


>AY443419-1|AAS00024.1|  260|Homo sapiens TGF-beta inducible nuclear
           protein protein.
          Length = 260

 Score =  332 bits (816), Expect = 7e-91
 Identities = 151/182 (82%), Positives = 168/182 (92%)
 Frame = -1

Query: 705 EKVAEGALPVYXLDRDVQSRAKVLSNMIKQKRKEKAGKWDVPIPKVRAQADAEVFKVLKS 526
           EK  +GA+P Y LDR+ QSRAKVLSNMIKQKRKEKAGKW+VP+PKVRAQ + EV KV+++
Sbjct: 79  EKTPQGAVPAYLLDREGQSRAKVLSNMIKQKRKEKAGKWEVPLPKVRAQGETEVLKVIRT 138

Query: 525 GKSKRKAWKRMVTKVTFVGENFTRKPPKFERFIRPMALRFKKAHVTHPELKATFCLPIIG 346
           GK K+KAWKRMVTKV FVG+ FTRKPPK+ERFIRPM LRFKKAHVTHPELKATFCLPI+G
Sbjct: 139 GKRKKKAWKRMVTKVCFVGDGFTRKPPKYERFIRPMGLRFKKAHVTHPELKATFCLPILG 198

Query: 345 VKKNPSSQMYTSLGVITKGTVIEVNISELGLVTQAGKVVWGKYAQVTNNPENDGCINAVL 166
           VKKNPSS +YT+LGVITKGTVIEVN+SELGLVTQ GKV+WGKYAQVTNNPENDGCINAVL
Sbjct: 199 VKKNPSSPLYTTLGVITKGTVIEVNVSELGLVTQGGKVIWGKYAQVTNNPENDGCINAVL 258

Query: 165 LV 160
           LV
Sbjct: 259 LV 260


>AJ012409-1|CAA10008.1|  260|Homo sapiens hypothetical protein
           protein.
          Length = 260

 Score =  332 bits (816), Expect = 7e-91
 Identities = 151/182 (82%), Positives = 168/182 (92%)
 Frame = -1

Query: 705 EKVAEGALPVYXLDRDVQSRAKVLSNMIKQKRKEKAGKWDVPIPKVRAQADAEVFKVLKS 526
           EK  +GA+P Y LDR+ QSRAKVLSNMIKQKRKEKAGKW+VP+PKVRAQ + EV KV+++
Sbjct: 79  EKTPQGAVPAYLLDREGQSRAKVLSNMIKQKRKEKAGKWEVPLPKVRAQGETEVLKVIRT 138

Query: 525 GKSKRKAWKRMVTKVTFVGENFTRKPPKFERFIRPMALRFKKAHVTHPELKATFCLPIIG 346
           GK K+KAWKRMVTKV FVG+ FTRKPPK+ERFIRPM LRFKKAHVTHPELKATFCLPI+G
Sbjct: 139 GKRKKKAWKRMVTKVCFVGDGFTRKPPKYERFIRPMGLRFKKAHVTHPELKATFCLPILG 198

Query: 345 VKKNPSSQMYTSLGVITKGTVIEVNISELGLVTQAGKVVWGKYAQVTNNPENDGCINAVL 166
           VKKNPSS +YT+LGVITKGTVIEVN+SELGLVTQ GKV+WGKYAQVTNNPENDGCINAVL
Sbjct: 199 VKKNPSSPLYTTLGVITKGTVIEVNVSELGLVTQGGKVIWGKYAQVTNNPENDGCINAVL 258

Query: 165 LV 160
           LV
Sbjct: 259 LV 260


>AF372458-1|AAK53761.1|  260|Homo sapiens hairy cell leukemia
           protein 1 protein.
          Length = 260

 Score =  332 bits (816), Expect = 7e-91
 Identities = 151/182 (82%), Positives = 168/182 (92%)
 Frame = -1

Query: 705 EKVAEGALPVYXLDRDVQSRAKVLSNMIKQKRKEKAGKWDVPIPKVRAQADAEVFKVLKS 526
           EK  +GA+P Y LDR+ QSRAKVLSNMIKQKRKEKAGKW+VP+PKVRAQ + EV KV+++
Sbjct: 79  EKTPQGAVPAYLLDREGQSRAKVLSNMIKQKRKEKAGKWEVPLPKVRAQGETEVLKVIRT 138

Query: 525 GKSKRKAWKRMVTKVTFVGENFTRKPPKFERFIRPMALRFKKAHVTHPELKATFCLPIIG 346
           GK K+KAWKRMVTKV FVG+ FTRKPPK+ERFIRPM LRFKKAHVTHPELKATFCLPI+G
Sbjct: 139 GKRKKKAWKRMVTKVCFVGDGFTRKPPKYERFIRPMGLRFKKAHVTHPELKATFCLPILG 198

Query: 345 VKKNPSSQMYTSLGVITKGTVIEVNISELGLVTQAGKVVWGKYAQVTNNPENDGCINAVL 166
           VKKNPSS +YT+LGVITKGTVIEVN+SELGLVTQ GKV+WGKYAQVTNNPENDGCINAVL
Sbjct: 199 VKKNPSSPLYTTLGVITKGTVIEVNVSELGLVTQGGKVIWGKYAQVTNNPENDGCINAVL 258

Query: 165 LV 160
           LV
Sbjct: 259 LV 260


>AF077615-1|AAG43048.1|  260|Homo sapiens TGF beta inducible nuclear
           protein TINP1 protein.
          Length = 260

 Score =  332 bits (816), Expect = 7e-91
 Identities = 151/182 (82%), Positives = 168/182 (92%)
 Frame = -1

Query: 705 EKVAEGALPVYXLDRDVQSRAKVLSNMIKQKRKEKAGKWDVPIPKVRAQADAEVFKVLKS 526
           EK  +GA+P Y LDR+ QSRAKVLSNMIKQKRKEKAGKW+VP+PKVRAQ + EV KV+++
Sbjct: 79  EKTPQGAVPAYLLDREGQSRAKVLSNMIKQKRKEKAGKWEVPLPKVRAQGETEVLKVIRT 138

Query: 525 GKSKRKAWKRMVTKVTFVGENFTRKPPKFERFIRPMALRFKKAHVTHPELKATFCLPIIG 346
           GK K+KAWKRMVTKV FVG+ FTRKPPK+ERFIRPM LRFKKAHVTHPELKATFCLPI+G
Sbjct: 139 GKRKKKAWKRMVTKVCFVGDGFTRKPPKYERFIRPMGLRFKKAHVTHPELKATFCLPILG 198

Query: 345 VKKNPSSQMYTSLGVITKGTVIEVNISELGLVTQAGKVVWGKYAQVTNNPENDGCINAVL 166
           VKKNPSS +YT+LGVITKGTVIEVN+SELGLVTQ GKV+WGKYAQVTNNPENDGCINAVL
Sbjct: 199 VKKNPSSPLYTTLGVITKGTVIEVNVSELGLVTQGGKVIWGKYAQVTNNPENDGCINAVL 258

Query: 165 LV 160
           LV
Sbjct: 259 LV 260


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,075,686
Number of Sequences: 237096
Number of extensions: 1818259
Number of successful extensions: 3310
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3218
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3310
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8175213644
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)