Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmmt10f16
         (705 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U56257-1|AAC32928.1|  259|Drosophila melanogaster intronic prote...   343   1e-94
AY118472-1|AAM49841.1|  259|Drosophila melanogaster GM13959p pro...   343   1e-94
AE014134-1874|AAF52940.2|  259|Drosophila melanogaster CG5277-PA...   343   1e-94
BT029408-1|ABK57065.1|  134|Drosophila melanogaster IP02459p pro...    29   4.7  
BT023293-1|AAY55709.1|  128|Drosophila melanogaster IP02458p pro...    29   4.7  
AE014298-2843|AAF48956.2|  128|Drosophila melanogaster CG32531-P...    29   4.7  
BT022235-1|AAY54651.1|  121|Drosophila melanogaster IP08115p pro...    29   6.2  
AE014297-4587|AAF57040.1|  118|Drosophila melanogaster CG15535-P...    29   6.2  
AY069745-1|AAL39890.1|  325|Drosophila melanogaster LP07727p pro...    29   8.1  
AE013599-842|AAF58957.2|  325|Drosophila melanogaster CG2063-PA ...    29   8.1  

>U56257-1|AAC32928.1|  259|Drosophila melanogaster intronic protein
           259 protein.
          Length = 259

 Score =  343 bits (844), Expect = 1e-94
 Identities = 165/182 (90%), Positives = 171/182 (93%)
 Frame = -1

Query: 705 EKVAEGALPVYXLDRDVQSRAKVLSNMIKQKRKEKAGKWDVPIPKVRAQADAEVFKVLKS 526
           EKV +GALP Y LDR +QS AKVLSNMIKQKRKEKAGKWDVPIPKVRAQ+DAEVFKVLK+
Sbjct: 78  EKVEDGALPHYLLDRGIQSSAKVLSNMIKQKRKEKAGKWDVPIPKVRAQSDAEVFKVLKT 137

Query: 525 GKSKRKAWKRMVTKVTFVGENFTRKPPKFERFIRPMALRFKKAHVTHPELKATFCLPIIG 346
           GK+KRKAWKRMVTKVTFVGENFTRKPPKFERFIRPM LR KKAHVTHPELKATF LPIIG
Sbjct: 138 GKTKRKAWKRMVTKVTFVGENFTRKPPKFERFIRPMGLRMKKAHVTHPELKATFNLPIIG 197

Query: 345 VKKNPSSQMYTSLGVITKGTVIEVNISELGLVTQAGKVVWGKYAQVTNNPENDGCINAVL 166
           VKKNPSS M+TSLGVITKGTVIEVNISELGLVTQ GKVVWGKYAQVTNNPENDG INAVL
Sbjct: 198 VKKNPSSPMFTSLGVITKGTVIEVNISELGLVTQTGKVVWGKYAQVTNNPENDGVINAVL 257

Query: 165 LV 160
           LV
Sbjct: 258 LV 259


>AY118472-1|AAM49841.1|  259|Drosophila melanogaster GM13959p
           protein.
          Length = 259

 Score =  343 bits (844), Expect = 1e-94
 Identities = 165/182 (90%), Positives = 171/182 (93%)
 Frame = -1

Query: 705 EKVAEGALPVYXLDRDVQSRAKVLSNMIKQKRKEKAGKWDVPIPKVRAQADAEVFKVLKS 526
           EKV +GALP Y LDR +QS AKVLSNMIKQKRKEKAGKWDVPIPKVRAQ+DAEVFKVLK+
Sbjct: 78  EKVEDGALPHYLLDRGIQSSAKVLSNMIKQKRKEKAGKWDVPIPKVRAQSDAEVFKVLKT 137

Query: 525 GKSKRKAWKRMVTKVTFVGENFTRKPPKFERFIRPMALRFKKAHVTHPELKATFCLPIIG 346
           GK+KRKAWKRMVTKVTFVGENFTRKPPKFERFIRPM LR KKAHVTHPELKATF LPIIG
Sbjct: 138 GKTKRKAWKRMVTKVTFVGENFTRKPPKFERFIRPMGLRMKKAHVTHPELKATFNLPIIG 197

Query: 345 VKKNPSSQMYTSLGVITKGTVIEVNISELGLVTQAGKVVWGKYAQVTNNPENDGCINAVL 166
           VKKNPSS M+TSLGVITKGTVIEVNISELGLVTQ GKVVWGKYAQVTNNPENDG INAVL
Sbjct: 198 VKKNPSSPMFTSLGVITKGTVIEVNISELGLVTQTGKVVWGKYAQVTNNPENDGVINAVL 257

Query: 165 LV 160
           LV
Sbjct: 258 LV 259


>AE014134-1874|AAF52940.2|  259|Drosophila melanogaster CG5277-PA
           protein.
          Length = 259

 Score =  343 bits (844), Expect = 1e-94
 Identities = 165/182 (90%), Positives = 171/182 (93%)
 Frame = -1

Query: 705 EKVAEGALPVYXLDRDVQSRAKVLSNMIKQKRKEKAGKWDVPIPKVRAQADAEVFKVLKS 526
           EKV +GALP Y LDR +QS AKVLSNMIKQKRKEKAGKWDVPIPKVRAQ+DAEVFKVLK+
Sbjct: 78  EKVEDGALPHYLLDRGIQSSAKVLSNMIKQKRKEKAGKWDVPIPKVRAQSDAEVFKVLKT 137

Query: 525 GKSKRKAWKRMVTKVTFVGENFTRKPPKFERFIRPMALRFKKAHVTHPELKATFCLPIIG 346
           GK+KRKAWKRMVTKVTFVGENFTRKPPKFERFIRPM LR KKAHVTHPELKATF LPIIG
Sbjct: 138 GKTKRKAWKRMVTKVTFVGENFTRKPPKFERFIRPMGLRMKKAHVTHPELKATFNLPIIG 197

Query: 345 VKKNPSSQMYTSLGVITKGTVIEVNISELGLVTQAGKVVWGKYAQVTNNPENDGCINAVL 166
           VKKNPSS M+TSLGVITKGTVIEVNISELGLVTQ GKVVWGKYAQVTNNPENDG INAVL
Sbjct: 198 VKKNPSSPMFTSLGVITKGTVIEVNISELGLVTQTGKVVWGKYAQVTNNPENDGVINAVL 257

Query: 165 LV 160
           LV
Sbjct: 258 LV 259


>BT029408-1|ABK57065.1|  134|Drosophila melanogaster IP02459p
           protein.
          Length = 134

 Score = 29.5 bits (63), Expect = 4.7
 Identities = 15/40 (37%), Positives = 23/40 (57%)
 Frame = -1

Query: 663 RDVQSRAKVLSNMIKQKRKEKAGKWDVPIPKVRAQADAEV 544
           RDV+ R  V  N +++ R     K D+  P++R  ADAE+
Sbjct: 42  RDVKRRKCVKENAVERLRVNSLRKNDILPPELREVADAEI 81


>BT023293-1|AAY55709.1|  128|Drosophila melanogaster IP02458p
           protein.
          Length = 128

 Score = 29.5 bits (63), Expect = 4.7
 Identities = 15/40 (37%), Positives = 23/40 (57%)
 Frame = -1

Query: 663 RDVQSRAKVLSNMIKQKRKEKAGKWDVPIPKVRAQADAEV 544
           RDV+ R  V  N +++ R     K D+  P++R  ADAE+
Sbjct: 36  RDVKRRKCVKENAVERLRVNSLRKNDILPPELREVADAEI 75


>AE014298-2843|AAF48956.2|  128|Drosophila melanogaster CG32531-PA
           protein.
          Length = 128

 Score = 29.5 bits (63), Expect = 4.7
 Identities = 15/40 (37%), Positives = 23/40 (57%)
 Frame = -1

Query: 663 RDVQSRAKVLSNMIKQKRKEKAGKWDVPIPKVRAQADAEV 544
           RDV+ R  V  N +++ R     K D+  P++R  ADAE+
Sbjct: 36  RDVKRRKCVKENAVERLRVNSLRKNDILPPELREVADAEI 75


>BT022235-1|AAY54651.1|  121|Drosophila melanogaster IP08115p
           protein.
          Length = 121

 Score = 29.1 bits (62), Expect = 6.2
 Identities = 18/44 (40%), Positives = 21/44 (47%)
 Frame = -1

Query: 615 KRKEKAGKWDVPIPKVRAQADAEVFKVLKSGKSKRKAWKRMVTK 484
           KRKEKA +      KVRA  DA+V    K    K KA  +   K
Sbjct: 56  KRKEKAAQEAAEREKVRADRDAQVKAYKKKRLEKTKAISKRTQK 99


>AE014297-4587|AAF57040.1|  118|Drosophila melanogaster CG15535-PA
           protein.
          Length = 118

 Score = 29.1 bits (62), Expect = 6.2
 Identities = 18/44 (40%), Positives = 21/44 (47%)
 Frame = -1

Query: 615 KRKEKAGKWDVPIPKVRAQADAEVFKVLKSGKSKRKAWKRMVTK 484
           KRKEKA +      KVRA  DA+V    K    K KA  +   K
Sbjct: 53  KRKEKAAQEAAEREKVRADRDAQVKAYKKKRLEKTKAISKRTQK 96


>AY069745-1|AAL39890.1|  325|Drosophila melanogaster LP07727p
           protein.
          Length = 325

 Score = 28.7 bits (61), Expect = 8.1
 Identities = 10/31 (32%), Positives = 18/31 (58%)
 Frame = -1

Query: 666 DRDVQSRAKVLSNMIKQKRKEKAGKWDVPIP 574
           D D   +A  L+  ++++ K++  KWD P P
Sbjct: 259 DMDKVEQATALARKVEEEAKKRKSKWDQPAP 289


>AE013599-842|AAF58957.2|  325|Drosophila melanogaster CG2063-PA
           protein.
          Length = 325

 Score = 28.7 bits (61), Expect = 8.1
 Identities = 10/31 (32%), Positives = 18/31 (58%)
 Frame = -1

Query: 666 DRDVQSRAKVLSNMIKQKRKEKAGKWDVPIP 574
           D D   +A  L+  ++++ K++  KWD P P
Sbjct: 259 DMDKVEQATALARKVEEEAKKRKSKWDQPAP 289


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,737,485
Number of Sequences: 53049
Number of extensions: 541464
Number of successful extensions: 1848
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1811
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1848
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3108380451
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)