Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt10f07
(691 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC000819-1|AAH00819.1| 290|Homo sapiens CCBL2 protein protein. 172 9e-43
AY028624-1|AAK26163.1| 454|Homo sapiens kynurenine aminotransfe... 172 9e-43
AL445991-7|CAI41345.1| 420|Homo sapiens cysteine conjugate-beta... 172 9e-43
X82224-1|CAA57702.1| 422|Homo sapiens glutamine--phenylpyruvate... 153 4e-37
BC033685-1|AAH33685.1| 374|Homo sapiens CCBL1 protein protein. 153 4e-37
AL441992-15|CAI15415.1| 372|Homo sapiens cysteine conjugate-bet... 153 4e-37
AL441992-14|CAI15414.1| 422|Homo sapiens cysteine conjugate-bet... 153 4e-37
CR450282-1|CAG29278.1| 175|Homo sapiens LOC56267 protein. 110 5e-24
AF091090-1|AAC72959.1| 175|Homo sapiens unknown protein. 110 5e-24
AL441992-16|CAI15416.1| 251|Homo sapiens cysteine conjugate-bet... 42 0.002
Y17448-1|CAB44343.1| 48|Homo sapiens cysteine conjugate beta-l... 33 1.3
AK128065-1|BAC87257.1| 821|Homo sapiens protein ( Homo sapiens ... 31 3.9
BC115376-1|AAI15377.1| 954|Homo sapiens C2orf16 protein protein. 30 8.9
BC112350-1|AAI12351.1| 955|Homo sapiens THRAP3 protein protein. 30 8.9
BC112330-1|AAI12331.1| 955|Homo sapiens thyroid hormone recepto... 30 8.9
BC065519-1|AAH65519.1| 374|Homo sapiens THRAP3 protein protein. 30 8.9
BC054046-1|AAH54046.1| 373|Homo sapiens THRAP3 protein protein. 30 8.9
BC037554-1|AAH37554.1| 672|Homo sapiens THRAP3 protein protein. 30 8.9
BC019076-1|AAH19076.1| 373|Homo sapiens Unknown (protein for IM... 30 8.9
BC010997-1|AAH10997.1| 375|Homo sapiens THRAP3 protein protein. 30 8.9
BC002501-1|AAH02501.1| 375|Homo sapiens THRAP3 protein protein. 30 8.9
AL834384-1|CAD39047.1| 845|Homo sapiens hypothetical protein pr... 30 8.9
AL591845-1|CAH71859.1| 955|Homo sapiens thyroid hormone recepto... 30 8.9
AF117756-1|AAD22034.1| 955|Homo sapiens thyroid hormone recepto... 30 8.9
AC074091-7|AAX93198.1| 939|Homo sapiens unknown protein. 30 8.9
>BC000819-1|AAH00819.1| 290|Homo sapiens CCBL2 protein protein.
Length = 290
Score = 172 bits (419), Expect = 9e-43
Identities = 83/170 (48%), Positives = 112/170 (65%), Gaps = 1/170 (0%)
Frame = -3
Query: 650 PGMWERTITVGSAGKTFSVTGWKIGWAYGPADLMRNLQVVHQNCVYTCCTPVEEAVARSF 471
PGMWERTIT+GSAGKTFSVTGWK+GW+ GP L+++LQ V QN +YTC TP++EA+A++F
Sbjct: 102 PGMWERTITIGSAGKTFSVTGWKLGWSIGPNHLIKHLQTVQQNTIYTCATPLQEALAQAF 161
Query: 470 EYELARRDSPDCYFYSLARELRPKRDYLMKILKENGFKPTLPEAGYFVVADWTDLEKKID 291
++ R D P+CYF SL +EL KRD ++++L+ G KP +P+ GYF++AD + L+ D
Sbjct: 162 WIDIKRMDDPECYFNSLPKELEVKRDRMVRLLESVGLKPIVPDGGYFIIADVSLLDP--D 219
Query: 290 LSSELXXXXXXXXXXXXXKEAGVL-AIPPSAFYSEAHKHLGETFARFCFI 144
LS + L AIP SAF + K E F RFCFI
Sbjct: 220 LSDMKNNEPYDYKFVKWMTKHKKLSAIPVSAFCNSETKSQFEKFVRFCFI 269
>AY028624-1|AAK26163.1| 454|Homo sapiens kynurenine
aminotransferase III protein.
Length = 454
Score = 172 bits (419), Expect = 9e-43
Identities = 83/170 (48%), Positives = 112/170 (65%), Gaps = 1/170 (0%)
Frame = -3
Query: 650 PGMWERTITVGSAGKTFSVTGWKIGWAYGPADLMRNLQVVHQNCVYTCCTPVEEAVARSF 471
PGMWERTIT+GSAGKTFSVTGWK+GW+ GP L+++LQ V QN +YTC TP++EA+A++F
Sbjct: 266 PGMWERTITIGSAGKTFSVTGWKLGWSIGPNHLIKHLQTVQQNTIYTCATPLQEALAQAF 325
Query: 470 EYELARRDSPDCYFYSLARELRPKRDYLMKILKENGFKPTLPEAGYFVVADWTDLEKKID 291
++ R D P+CYF SL +EL KRD ++++L+ G KP +P+ GYF++AD + L+ D
Sbjct: 326 WIDIKRMDDPECYFNSLPKELEVKRDRMVRLLESVGLKPIVPDGGYFIIADVSLLDP--D 383
Query: 290 LSSELXXXXXXXXXXXXXKEAGVL-AIPPSAFYSEAHKHLGETFARFCFI 144
LS + L AIP SAF + K E F RFCFI
Sbjct: 384 LSDMKNNEPYDYKFVKWMTKHKKLSAIPVSAFCNSETKSQFEKFVRFCFI 433
>AL445991-7|CAI41345.1| 420|Homo sapiens cysteine conjugate-beta
lyase 2 protein.
Length = 420
Score = 172 bits (419), Expect = 9e-43
Identities = 83/170 (48%), Positives = 112/170 (65%), Gaps = 1/170 (0%)
Frame = -3
Query: 650 PGMWERTITVGSAGKTFSVTGWKIGWAYGPADLMRNLQVVHQNCVYTCCTPVEEAVARSF 471
PGMWERTIT+GSAGKTFSVTGWK+GW+ GP L+++LQ V QN +YTC TP++EA+A++F
Sbjct: 232 PGMWERTITIGSAGKTFSVTGWKLGWSIGPNHLIKHLQTVQQNTIYTCATPLQEALAQAF 291
Query: 470 EYELARRDSPDCYFYSLARELRPKRDYLMKILKENGFKPTLPEAGYFVVADWTDLEKKID 291
++ R D P+CYF SL +EL KRD ++++L+ G KP +P+ GYF++AD + L+ D
Sbjct: 292 WIDIKRMDDPECYFNSLPKELEVKRDRMVRLLESVGLKPIVPDGGYFIIADVSLLDP--D 349
Query: 290 LSSELXXXXXXXXXXXXXKEAGVL-AIPPSAFYSEAHKHLGETFARFCFI 144
LS + L AIP SAF + K E F RFCFI
Sbjct: 350 LSDMKNNEPYDYKFVKWMTKHKKLSAIPVSAFCNSETKSQFEKFVRFCFI 399
>X82224-1|CAA57702.1| 422|Homo sapiens glutamine--phenylpyruvate
aminotransferase protein.
Length = 422
Score = 153 bits (372), Expect = 4e-37
Identities = 71/170 (41%), Positives = 103/170 (60%), Gaps = 1/170 (0%)
Frame = -3
Query: 650 PGMWERTITVGSAGKTFSVTGWKIGWAYGPADLMRNLQVVHQNCVYTCCTPVEEAVARSF 471
PGMWERT+T+GSAGKTFS TGWK+GW GP +M++L+ VHQN V+ C T + AVA SF
Sbjct: 233 PGMWERTLTIGSAGKTFSATGWKVGWVLGPDHIMKHLRTVHQNSVFHCPTQSQAAVAESF 292
Query: 470 EYELARRDSPDCYFYSLARELRPKRDYLMKILKENGFKPTLPEAGYFVVADWTDLEKKI- 294
E E P YF + ++ RD++++ L+ G KP +P+ YF++ D +D ++K+
Sbjct: 293 EREQLLFRQPSSYFVQFPQAMQRCRDHMIRSLQSVGLKPIIPQGSYFLITDISDFKRKMP 352
Query: 293 DLSSELXXXXXXXXXXXXXKEAGVLAIPPSAFYSEAHKHLGETFARFCFI 144
DL + K G++AIP S FYS H+ + + RFCF+
Sbjct: 353 DLPGAVDEPYDRRFVKWMIKNKGLVAIPVSIFYSVPHQKHFDHYIRFCFV 402
>BC033685-1|AAH33685.1| 374|Homo sapiens CCBL1 protein protein.
Length = 374
Score = 153 bits (372), Expect = 4e-37
Identities = 71/170 (41%), Positives = 103/170 (60%), Gaps = 1/170 (0%)
Frame = -3
Query: 650 PGMWERTITVGSAGKTFSVTGWKIGWAYGPADLMRNLQVVHQNCVYTCCTPVEEAVARSF 471
PGMWERT+T+GSAGKTFS TGWK+GW GP +M++L+ VHQN V+ C T + AVA SF
Sbjct: 183 PGMWERTLTIGSAGKTFSATGWKVGWVLGPDHIMKHLRTVHQNSVFHCPTQSQAAVAESF 242
Query: 470 EYELARRDSPDCYFYSLARELRPKRDYLMKILKENGFKPTLPEAGYFVVADWTDLEKKI- 294
E E P YF + ++ RD++++ L+ G KP +P+ YF++ D +D ++K+
Sbjct: 243 EREQLLFRQPSSYFVQFPQAMQRCRDHMIRSLQSVGLKPIIPQGSYFLITDISDFKRKMP 302
Query: 293 DLSSELXXXXXXXXXXXXXKEAGVLAIPPSAFYSEAHKHLGETFARFCFI 144
DL + K G++AIP S FYS H+ + + RFCF+
Sbjct: 303 DLPGAVDEPYDRRFVKWMIKNKGLVAIPVSIFYSVPHQKHFDHYIRFCFV 352
>AL441992-15|CAI15415.1| 372|Homo sapiens cysteine conjugate-beta
lyase; cytoplasmic (glutamine transaminase K, kyneureni
protein.
Length = 372
Score = 153 bits (372), Expect = 4e-37
Identities = 71/170 (41%), Positives = 103/170 (60%), Gaps = 1/170 (0%)
Frame = -3
Query: 650 PGMWERTITVGSAGKTFSVTGWKIGWAYGPADLMRNLQVVHQNCVYTCCTPVEEAVARSF 471
PGMWERT+T+GSAGKTFS TGWK+GW GP +M++L+ VHQN V+ C T + AVA SF
Sbjct: 183 PGMWERTLTIGSAGKTFSATGWKVGWVLGPDHIMKHLRTVHQNSVFHCPTQSQAAVAESF 242
Query: 470 EYELARRDSPDCYFYSLARELRPKRDYLMKILKENGFKPTLPEAGYFVVADWTDLEKKI- 294
E E P YF + ++ RD++++ L+ G KP +P+ YF++ D +D ++K+
Sbjct: 243 EREQLLFRQPSSYFVQFPQAMQRCRDHMIRSLQSVGLKPIIPQGSYFLITDISDFKRKMP 302
Query: 293 DLSSELXXXXXXXXXXXXXKEAGVLAIPPSAFYSEAHKHLGETFARFCFI 144
DL + K G++AIP S FYS H+ + + RFCF+
Sbjct: 303 DLPGAVDEPYDRRFVKWMIKNKGLVAIPVSIFYSVPHQKHFDHYIRFCFV 352
>AL441992-14|CAI15414.1| 422|Homo sapiens cysteine conjugate-beta
lyase; cytoplasmic (glutamine transaminase K, kyneureni
protein.
Length = 422
Score = 153 bits (372), Expect = 4e-37
Identities = 71/170 (41%), Positives = 103/170 (60%), Gaps = 1/170 (0%)
Frame = -3
Query: 650 PGMWERTITVGSAGKTFSVTGWKIGWAYGPADLMRNLQVVHQNCVYTCCTPVEEAVARSF 471
PGMWERT+T+GSAGKTFS TGWK+GW GP +M++L+ VHQN V+ C T + AVA SF
Sbjct: 233 PGMWERTLTIGSAGKTFSATGWKVGWVLGPDHIMKHLRTVHQNSVFHCPTQSQAAVAESF 292
Query: 470 EYELARRDSPDCYFYSLARELRPKRDYLMKILKENGFKPTLPEAGYFVVADWTDLEKKI- 294
E E P YF + ++ RD++++ L+ G KP +P+ YF++ D +D ++K+
Sbjct: 293 EREQLLFRQPSSYFVQFPQAMQRCRDHMIRSLQSVGLKPIIPQGSYFLITDISDFKRKMP 352
Query: 293 DLSSELXXXXXXXXXXXXXKEAGVLAIPPSAFYSEAHKHLGETFARFCFI 144
DL + K G++AIP S FYS H+ + + RFCF+
Sbjct: 353 DLPGAVDEPYDRRFVKWMIKNKGLVAIPVSIFYSVPHQKHFDHYIRFCFV 402
>CR450282-1|CAG29278.1| 175|Homo sapiens LOC56267 protein.
Length = 175
Score = 110 bits (264), Expect = 5e-24
Identities = 44/70 (62%), Positives = 58/70 (82%)
Frame = -3
Query: 650 PGMWERTITVGSAGKTFSVTGWKIGWAYGPADLMRNLQVVHQNCVYTCCTPVEEAVARSF 471
PGMWERTIT+GSAGKTFSVTGWK+GW+ GP L+++LQ V QN +YTC TP++EA+A++F
Sbjct: 102 PGMWERTITIGSAGKTFSVTGWKLGWSIGPNHLIKHLQTVQQNTIYTCATPLQEALAQAF 161
Query: 470 EYELARRDSP 441
++ R D P
Sbjct: 162 WIDIKRMDDP 171
>AF091090-1|AAC72959.1| 175|Homo sapiens unknown protein.
Length = 175
Score = 110 bits (264), Expect = 5e-24
Identities = 44/70 (62%), Positives = 58/70 (82%)
Frame = -3
Query: 650 PGMWERTITVGSAGKTFSVTGWKIGWAYGPADLMRNLQVVHQNCVYTCCTPVEEAVARSF 471
PGMWERTIT+GSAGKTFSVTGWK+GW+ GP L+++LQ V QN +YTC TP++EA+A++F
Sbjct: 102 PGMWERTITIGSAGKTFSVTGWKLGWSIGPNHLIKHLQTVQQNTIYTCATPLQEALAQAF 161
Query: 470 EYELARRDSP 441
++ R D P
Sbjct: 162 WIDIKRMDDP 171
>AL441992-16|CAI15416.1| 251|Homo sapiens cysteine conjugate-beta
lyase; cytoplasmic (glutamine transaminase K, kyneureni
protein.
Length = 251
Score = 41.9 bits (94), Expect = 0.002
Identities = 16/18 (88%), Positives = 18/18 (100%)
Frame = -3
Query: 650 PGMWERTITVGSAGKTFS 597
PGMWERT+T+GSAGKTFS
Sbjct: 233 PGMWERTLTIGSAGKTFS 250
>Y17448-1|CAB44343.1| 48|Homo sapiens cysteine conjugate
beta-lyase protein.
Length = 48
Score = 32.7 bits (71), Expect = 1.3
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = -3
Query: 227 GVLAIPPSAFYSEAHKHLGETFARFCFI 144
G++AIP S FYS H+ + + RFCF+
Sbjct: 1 GLVAIPVSIFYSVPHQKHFDHYIRFCFV 28
>AK128065-1|BAC87257.1| 821|Homo sapiens protein ( Homo sapiens
cDNA FLJ46185 fis, clone TESTI4004917, moderately
similar to Dynein beta chain, ciliary. ).
Length = 821
Score = 31.1 bits (67), Expect = 3.9
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -1
Query: 541 CKWYTRTVCTRAARRSRKPWPARSSTSW 458
C W + +R++R S PWP R+S W
Sbjct: 786 CGWPASSTPSRSSRPSCSPWPGRTSGPW 813
>BC115376-1|AAI15377.1| 954|Homo sapiens C2orf16 protein protein.
Length = 954
Score = 29.9 bits (64), Expect = 8.9
Identities = 17/45 (37%), Positives = 28/45 (62%), Gaps = 5/45 (11%)
Frame = -1
Query: 298 RSTYRANWTNTKITS--SQRNSLKRRAYSPYRR---APSTLKHTN 179
R+ + +W N + S SQR+SL+RR +SP +R +PS H++
Sbjct: 526 RTRHNPSWRNHRSPSERSQRSSLERRHHSPSQRSHCSPSRKNHSS 570
>BC112350-1|AAI12351.1| 955|Homo sapiens THRAP3 protein protein.
Length = 955
Score = 29.9 bits (64), Expect = 8.9
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Frame = -1
Query: 289 YRANWTNTKITSSQRNSLKRRAYSPYRRAPS--TLKHTNTWGRRSRD 155
YR+NW N + S R + R+ SP RR+PS + H+ + S D
Sbjct: 107 YRSNWQNYRQAYSPRRG-RSRSRSPKRRSPSPRSRSHSRNSDKSSSD 152
>BC112330-1|AAI12331.1| 955|Homo sapiens thyroid hormone receptor
associated protein 3 protein.
Length = 955
Score = 29.9 bits (64), Expect = 8.9
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Frame = -1
Query: 289 YRANWTNTKITSSQRNSLKRRAYSPYRRAPS--TLKHTNTWGRRSRD 155
YR+NW N + S R + R+ SP RR+PS + H+ + S D
Sbjct: 107 YRSNWQNYRQAYSPRRG-RSRSRSPKRRSPSPRSRSHSRNSDKSSSD 152
>BC065519-1|AAH65519.1| 374|Homo sapiens THRAP3 protein protein.
Length = 374
Score = 29.9 bits (64), Expect = 8.9
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Frame = -1
Query: 289 YRANWTNTKITSSQRNSLKRRAYSPYRRAPS--TLKHTNTWGRRSRD 155
YR+NW N + S R + R+ SP RR+PS + H+ + S D
Sbjct: 107 YRSNWQNYRQAYSPRRG-RSRSRSPKRRSPSPRSRSHSRNSDKSSSD 152
>BC054046-1|AAH54046.1| 373|Homo sapiens THRAP3 protein protein.
Length = 373
Score = 29.9 bits (64), Expect = 8.9
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Frame = -1
Query: 289 YRANWTNTKITSSQRNSLKRRAYSPYRRAPS--TLKHTNTWGRRSRD 155
YR+NW N + S R + R+ SP RR+PS + H+ + S D
Sbjct: 107 YRSNWQNYRQAYSPRRG-RSRSRSPKRRSPSPRSRSHSRNSDKSSSD 152
>BC037554-1|AAH37554.1| 672|Homo sapiens THRAP3 protein protein.
Length = 672
Score = 29.9 bits (64), Expect = 8.9
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Frame = -1
Query: 289 YRANWTNTKITSSQRNSLKRRAYSPYRRAPS--TLKHTNTWGRRSRD 155
YR+NW N + S R + R+ SP RR+PS + H+ + S D
Sbjct: 107 YRSNWQNYRQAYSPRRG-RSRSRSPKRRSPSPRSRSHSRNSDKSSSD 152
>BC019076-1|AAH19076.1| 373|Homo sapiens Unknown (protein for
IMAGE:3834482) protein.
Length = 373
Score = 29.9 bits (64), Expect = 8.9
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Frame = -1
Query: 289 YRANWTNTKITSSQRNSLKRRAYSPYRRAPS--TLKHTNTWGRRSRD 155
YR+NW N + S R + R+ SP RR+PS + H+ + S D
Sbjct: 107 YRSNWQNYRQAYSPRRG-RSRSRSPKRRSPSPRSRSHSRNSDKSSSD 152
>BC010997-1|AAH10997.1| 375|Homo sapiens THRAP3 protein protein.
Length = 375
Score = 29.9 bits (64), Expect = 8.9
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Frame = -1
Query: 289 YRANWTNTKITSSQRNSLKRRAYSPYRRAPS--TLKHTNTWGRRSRD 155
YR+NW N + S R + R+ SP RR+PS + H+ + S D
Sbjct: 107 YRSNWQNYRQAYSPRRG-RSRSRSPKRRSPSPRSRSHSRNSDKSSSD 152
>BC002501-1|AAH02501.1| 375|Homo sapiens THRAP3 protein protein.
Length = 375
Score = 29.9 bits (64), Expect = 8.9
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Frame = -1
Query: 289 YRANWTNTKITSSQRNSLKRRAYSPYRRAPS--TLKHTNTWGRRSRD 155
YR+NW N + S R + R+ SP RR+PS + H+ + S D
Sbjct: 107 YRSNWQNYRQAYSPRRG-RSRSRSPKRRSPSPRSRSHSRNSDKSSSD 152
>AL834384-1|CAD39047.1| 845|Homo sapiens hypothetical protein
protein.
Length = 845
Score = 29.9 bits (64), Expect = 8.9
Identities = 17/45 (37%), Positives = 28/45 (62%), Gaps = 5/45 (11%)
Frame = -1
Query: 298 RSTYRANWTNTKITS--SQRNSLKRRAYSPYRR---APSTLKHTN 179
R+ + +W N + S SQR+SL+RR +SP +R +PS H++
Sbjct: 417 RTRHNPSWRNHRSPSERSQRSSLERRHHSPSQRSHCSPSRKNHSS 461
>AL591845-1|CAH71859.1| 955|Homo sapiens thyroid hormone receptor
associated protein 3 protein.
Length = 955
Score = 29.9 bits (64), Expect = 8.9
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Frame = -1
Query: 289 YRANWTNTKITSSQRNSLKRRAYSPYRRAPS--TLKHTNTWGRRSRD 155
YR+NW N + S R + R+ SP RR+PS + H+ + S D
Sbjct: 107 YRSNWQNYRQAYSPRRG-RSRSRSPKRRSPSPRSRSHSRNSDKSSSD 152
>AF117756-1|AAD22034.1| 955|Homo sapiens thyroid hormone
receptor-associated protein complex component TRAP150
protein.
Length = 955
Score = 29.9 bits (64), Expect = 8.9
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Frame = -1
Query: 289 YRANWTNTKITSSQRNSLKRRAYSPYRRAPS--TLKHTNTWGRRSRD 155
YR+NW N + S R + R+ SP RR+PS + H+ + S D
Sbjct: 107 YRSNWQNYRQAYSPRRG-RSRSRSPKRRSPSPRSRSHSRNSDKSSSD 152
>AC074091-7|AAX93198.1| 939|Homo sapiens unknown protein.
Length = 939
Score = 29.9 bits (64), Expect = 8.9
Identities = 17/45 (37%), Positives = 28/45 (62%), Gaps = 5/45 (11%)
Frame = -1
Query: 298 RSTYRANWTNTKITS--SQRNSLKRRAYSPYRR---APSTLKHTN 179
R+ + +W N + S SQR+SL+RR +SP +R +PS H++
Sbjct: 511 RTRHNPSWRNHRSPSERSQRSSLERRHHSPSQRSHCSPSRKNHSS 555
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,618,025
Number of Sequences: 237096
Number of extensions: 1766925
Number of successful extensions: 6101
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 5938
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6094
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7895240574
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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