Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt10e12
(650 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0163 + 26400486-26400621,26401477-26401646,26402623-264027... 140 1e-33
02_05_0164 + 26405052-26405208,26405304-26405473,26406278-264063... 124 6e-29
01_06_0153 - 27044553-27044669,27044842-27044964,27045066-270451... 112 2e-25
03_02_0770 + 11038971-11039392,11040071-11040353,11040697-11040798 96 2e-20
05_04_0012 + 17145112-17145205,17145681-17145752,17145832-171459... 92 3e-19
02_02_0418 + 10000744-10000840,10000952-10001023,10001786-100018... 91 7e-19
05_01_0400 - 3159370-3159385,3159599-3159703,3159972-3160006,316... 90 2e-18
01_03_0216 + 13870364-13870472,13871406-13871477,13871603-138716... 89 2e-18
12_01_0945 + 9351915-9351929,9352221-9352386,9352903-9353024,935... 47 1e-05
01_06_0729 - 31546464-31546574,31546653-31546694,31546795-315468... 46 3e-05
01_07_0023 + 40556545-40556629,40558063-40558253 45 5e-05
05_06_0162 - 26080750-26081478 39 0.004
10_08_0871 - 21181798-21181917,21182024-21182065,21182162-211821... 34 0.11
10_08_1007 - 22210263-22210400,22210506-22210547,22210626-222107... 33 0.15
02_05_0607 - 30315982-30316215,30316688-30316831,30316902-303169... 31 0.60
01_06_1114 + 34619597-34619972,34620772-34620852,34621294-346213... 31 0.80
12_02_0410 + 18701258-18701327,18701398-18701630,18701782-187026... 31 1.1
01_01_0409 - 3084821-3084988,3085069-3085155,3085270-3085476,308... 30 1.4
02_02_0704 + 13095449-13095584,13095671-13095990,13096102-130964... 29 3.2
03_03_0160 + 14957139-14957603,14958054-14958113,14959012-14959776 29 4.2
08_01_0421 - 3735155-3736067,3736154-3736176 28 5.6
06_03_0868 - 25544933-25544938,25544939-25545142,25545494-255457... 28 5.6
01_06_1411 + 37127098-37128279 28 5.6
01_01_0746 + 5772340-5773083 28 5.6
01_01_0219 + 1863478-1864041,1864459-1865109 28 5.6
07_01_0139 - 1014952-1015165,1015271-1015350,1015420-1015629,101... 28 7.4
05_05_0133 + 22614219-22614651,22614767-22615671,22615918-226162... 28 7.4
04_03_0070 + 10677677-10679989 28 7.4
03_05_0376 - 23598026-23598136,23598395-23598484,23598870-235989... 28 7.4
01_01_0186 + 1598046-1598234,1599215-1599277,1599359-1599448,159... 28 7.4
07_01_0632 + 4729426-4731300 27 9.8
02_05_0500 - 29538409-29539283,29540306-29541641 27 9.8
>02_05_0163 +
26400486-26400621,26401477-26401646,26402623-26402713,
26402822-26402873,26403462-26403565,26403648-26403724,
26403890-26404069
Length = 269
Score = 140 bits (338), Expect = 1e-33
Identities = 71/170 (41%), Positives = 99/170 (58%), Gaps = 1/170 (0%)
Frame = -1
Query: 644 DISNCGKPIIAAVNGFALGGGCELAMLCDIIYAGEKAKFGQPEINIGTIPGAGGTQRLPR 465
D+ P IA + G ALGGG ELA+ CD+ GE A G PE + IPGAGGTQRLPR
Sbjct: 100 DLKALSIPTIAVIEGAALGGGLELALSCDLRICGENATLGLPETGLAIIPGAGGTQRLPR 159
Query: 464 YVGKSKAMEIVLTGNFFDAHEAEKMGLVSKVFPVEKLLEETIKLAERIGTHSPLIVKLAK 285
VG+S+A E++ TG +A EA MGL + P + E+ ++LA I PL +++AK
Sbjct: 160 IVGRSRAKEMIFTGRRCNATEAVMMGLANYCVPAGEAHEKALELAREIAQKGPLGIRMAK 219
Query: 284 QAVNQAYETT-LKSGLQFEKSTFYGTFATEDRKEGMTAFVEKRPPNFKNE 138
+A++Q + + S L E + TEDR EG+ AF E+R P + +
Sbjct: 220 KAIDQGMQAADMPSALAVEGECYEQLLHTEDRLEGLAAFAERRKPVYSGK 269
>02_05_0164 +
26405052-26405208,26405304-26405473,26406278-26406352,
26406570-26406660,26406768-26406848,26407192-26407353,
26407425-26407501,26407670-26407846
Length = 329
Score = 124 bits (299), Expect = 6e-29
Identities = 74/186 (39%), Positives = 98/186 (52%), Gaps = 29/186 (15%)
Frame = -1
Query: 623 PIIAAVNGFALGGGCELAMLCDIIYAGEKAKFGQPEINIGTIPG---------AGGTQRL 471
P IA V G A GGG ELA+ CD+ GE A F PE + IPG +GGTQRL
Sbjct: 139 PTIAIVEGAAFGGGLELALSCDLRICGENATFSLPETGLAIIPGYVFKMALYFSGGTQRL 198
Query: 470 PRYVGKSKAMEIVLTGNFFDAHEAEKM--------------------GLVSKVFPVEKLL 351
PR VGKS+A E++ TG FDA EA M G+V+ P +
Sbjct: 199 PRIVGKSRAKELIFTGRRFDAVEAVTMGKVGLAPSFLRGVLLHFISTGVVNYCVPAGEAY 258
Query: 350 EETIKLAERIGTHSPLIVKLAKQAVNQAYETTLKSGLQFEKSTFYGTFATEDRKEGMTAF 171
+ ++LA+ I PL +++AK+A+NQ E L +GL E+ + T+DR EG+ AF
Sbjct: 259 KRALELAQEINQKGPLAIRMAKKAINQGMEVDLSAGLAVEEECYEQVLHTQDRLEGLAAF 318
Query: 170 VEKRPP 153
EKR P
Sbjct: 319 AEKRKP 324
>01_06_0153 -
27044553-27044669,27044842-27044964,27045066-27045161,
27045323-27045370,27046360-27046458,27046554-27046592,
27047032-27047133,27047225-27047347,27047535-27047783
Length = 331
Score = 112 bits (270), Expect = 2e-25
Identities = 62/161 (38%), Positives = 93/161 (57%), Gaps = 1/161 (0%)
Frame = -1
Query: 626 KPIIAAVNGFALGGGCELAMLCDIIYAGEKAKFGQPEINIGTIPGAGGTQRLPRYVGKSK 447
KP+IA V G+A+GGG L M+CD+ A + A FGQ +G+ GT + R VG K
Sbjct: 166 KPVIAMVAGYAVGGGHVLHMVCDLTIAADNAIFGQTGPKVGSFDAGYGTSIMSRLVGPKK 225
Query: 446 AMEIVLTGNFFDAHEAEKMGLVSKVFPVEKLLEETIKLAERIGTHSPLIVKLAKQAVNQA 267
A E+ F+ A EA++MGLV+ V P+ L ET+K +I +SP +++ K A+N A
Sbjct: 226 AREMWFLSRFYTADEADRMGLVNVVVPLADLERETVKWCRKILRNSPTAIRVLKSALNAA 285
Query: 266 YETTLKSGLQ-FEKSTFYGTFATEDRKEGMTAFVEKRPPNF 147
+ +GLQ + + TE+ KEG A++E+R P+F
Sbjct: 286 DDG--HAGLQELGGNATLIFYGTEEAKEGKNAYMERRRPDF 324
>03_02_0770 + 11038971-11039392,11040071-11040353,11040697-11040798
Length = 268
Score = 95.9 bits (228), Expect = 2e-20
Identities = 53/163 (32%), Positives = 87/163 (53%), Gaps = 2/163 (1%)
Frame = -1
Query: 641 ISNCGKPIIAAVNGFALGGGCELAMLCDIIYAGEKAKFGQPEINIGTIPGAGGTQRLPRY 462
+ C KPI+ A+ GFA+ G E+A+ CDI+ AG AKF G P G +Q+L R
Sbjct: 98 MERCRKPIVGAIAGFAVTAGFEIALACDILVAGRSAKFIDTHAKFGIFPSWGLSQKLSRV 157
Query: 461 VGKSKAMEIVLTGNFFDAHEAEKMGLVSKVFPVEKLLEETIKLAERIGTHSPLIVKLAKQ 282
+G ++A E+ LT A AEK GLV+ + ++L + I++ E I ++ +V L K
Sbjct: 158 IGPNRAREVSLTCMPITAEMAEKWGLVNHIVDDTQVLSKAIEVCEAIARNNRNLVVLYKS 217
Query: 281 AVNQAYETTLK--SGLQFEKSTFYGTFATEDRKEGMTAFVEKR 159
+N + L+ L+ E++ Y T+++ M F++ R
Sbjct: 218 VINDGLQLDLEHARALEKERAHDYYNGMTKEQFASMQKFIQGR 260
>05_04_0012 +
17145112-17145205,17145681-17145752,17145832-17145911,
17146059-17146175,17146282-17146363,17147086-17147141,
17147258-17147560,17147658-17147744,17148118-17148292,
17148370-17148491,17149028-17149191,17149277-17149531,
17150419-17150540,17150656-17150777,17151302-17151450,
17151565-17151703,17151831-17151866
Length = 724
Score = 92.3 bits (219), Expect = 3e-19
Identities = 46/102 (45%), Positives = 60/102 (58%)
Frame = -1
Query: 626 KPIIAAVNGFALGGGCELAMLCDIIYAGEKAKFGQPEINIGTIPGAGGTQRLPRYVGKSK 447
KP +AA++G ALGGG EL M+C + A+ G PE+ +G IPG GGTQRLPR VG K
Sbjct: 102 KPSVAAIDGVALGGGLELVMVCHARVSTSSAQLGLPELQLGIIPGLGGTQRLPRLVGLPK 161
Query: 446 AMEIVLTGNFFDAHEAEKMGLVSKVFPVEKLLEETIKLAERI 321
A+E++L EA K GLV V ++L+ A I
Sbjct: 162 ALEMLLMSKPLKGVEAHKFGLVDAVVSADELISTACSWALEI 203
>02_02_0418 +
10000744-10000840,10000952-10001023,10001786-10001848,
10001952-10002008,10002159-10002226,10002327-10002408,
10002517-10002572,10002934-10003236,10003638-10003724,
10004454-10004628,10004813-10004934,10005171-10005334,
10006201-10006455,10006979-10007100,10007220-10007341,
10007452-10007600,10007649-10007652
Length = 665
Score = 91.1 bits (216), Expect = 7e-19
Identities = 49/115 (42%), Positives = 69/115 (60%), Gaps = 1/115 (0%)
Frame = -1
Query: 626 KPIIAAVNGFALGGGCELAMLCDIIYAGEKAKFGQPEINIGTIPGAGGTQRLPRYVGKSK 447
KP +AA+ G ALGGG EL M C + +A+ G PE+ +G IPG GGTQRLPR VG K
Sbjct: 100 KPSVAAIQGLALGGGLELTMGCHARISTPEAQLGLPELTLGIIPGFGGTQRLPRLVGLPK 159
Query: 446 AMEIVLTGNFFDAHEAEKMGLVSKVFPVEKLLEETIKLAERIGTH-SPLIVKLAK 285
A+E++L F A E ++ GLV + ++L++ + A I + P I LA+
Sbjct: 160 AIEMMLQSKFITAKEGKEGGLVDALCSPDELIKMSRLWALEIANYRKPWIRSLAR 214
>05_01_0400 -
3159370-3159385,3159599-3159703,3159972-3160006,
3160134-3160272,3160457-3160605,3161052-3161173,
3161296-3161417,3161779-3162033,3162108-3162271,
3162311-3162489,3162593-3162767,3162916-3163002,
3163144-3163446,3163539-3163594,3163813-3163894,
3163972-3164039,3164779-3164835,3164926-3164991,
3165121-3165192,3167363-3167459
Length = 782
Score = 89.8 bits (213), Expect = 2e-18
Identities = 43/100 (43%), Positives = 61/100 (61%)
Frame = -1
Query: 629 GKPIIAAVNGFALGGGCELAMLCDIIYAGEKAKFGQPEINIGTIPGAGGTQRLPRYVGKS 450
GKP +AA+NG ALGGG E++M+C + A+ G PE+ +G IP GGTQRLPR VG +
Sbjct: 100 GKPSVAAINGPALGGGLEISMVCQARISIPTAQLGLPELQLGVIPAFGGTQRLPRLVGLT 159
Query: 449 KAMEIVLTGNFFDAHEAEKMGLVSKVFPVEKLLEETIKLA 330
KA+E++L A EA ++ L+ + LL + A
Sbjct: 160 KALEMMLMSKPIKAEEAHQLALIDAIVSPNDLLNTACRWA 199
>01_03_0216 +
13870364-13870472,13871406-13871477,13871603-13871668,
13871767-13871823,13871917-13871984,13872068-13872149,
13872445-13872500,13872645-13872947,13873042-13873128,
13873199-13873373,13873481-13873602,13873689-13873852,
13873925-13874179,13874312-13874433,13874542-13874663,
13875111-13875259,13875346-13875484,13875715-13875750
Length = 727
Score = 89.4 bits (212), Expect = 2e-18
Identities = 42/92 (45%), Positives = 59/92 (64%)
Frame = -1
Query: 626 KPIIAAVNGFALGGGCELAMLCDIIYAGEKAKFGQPEINIGTIPGAGGTQRLPRYVGKSK 447
KP +AA++G ALGGG E+AM C + A+ G PE+ +G IPG GGTQRLPR VG +K
Sbjct: 105 KPSVAAIDGLALGGGLEVAMACHARISTPTAQLGLPELQLGVIPGFGGTQRLPRLVGLTK 164
Query: 446 AMEIVLTGNFFDAHEAEKMGLVSKVFPVEKLL 351
A+E++L EA ++GLV + + L+
Sbjct: 165 ALEMMLLSKPIKGAEAHQLGLVDSLVSADDLV 196
>12_01_0945 +
9351915-9351929,9352221-9352386,9352903-9353024,
9353098-9353214,9356997-9357077,9357204-9357272,
9357727-9357790,9357988-9358067,9358164-9358247,
9358418-9358502,9359658-9359743,9359924-9360045,
9360841-9360901,9360981-9361166,9363622-9363723,
9363803-9363844,9363949-9364086
Length = 539
Score = 47.2 bits (107), Expect = 1e-05
Identities = 41/170 (24%), Positives = 72/170 (42%), Gaps = 2/170 (1%)
Frame = -1
Query: 641 ISNCGKPIIAAVNGFALGGGCELAMLCDIIYAGEKAKFGQPEINIGTIPGAGGTQRLPRY 462
I+ KP ++ + G +GGG +++ + F PE +G P G + L R
Sbjct: 231 IATYSKPQVSLLTGIVMGGGAGVSIHGRFRVVTDSTVFAMPETALGLFPDIGASYFLSRL 290
Query: 461 VGKSKAMEIVLTGNFFDAHEAEKMGLVSKVFPVEK--LLEETIKLAERIGTHSPLIVKLA 288
+G + LTG DA E GL + P ++ LLEE++K ++ T P +
Sbjct: 291 LG-FYGEYVGLTGVRLDAAEMLACGLATHFVPSDRLSLLEESLK---KVDTSDPFAICGI 346
Query: 287 KQAVNQAYETTLKSGLQFEKSTFYGTFATEDRKEGMTAFVEKRPPNFKNE 138
+Q + +LK + ++ E + A +E+ PN +E
Sbjct: 347 IDQYSQ--QPSLKEKSALNRLEIINKCFSKKTVEEIIASLEQEAPNVADE 394
>01_06_0729 -
31546464-31546574,31546653-31546694,31546795-31546896,
31547148-31547246,31547522-31547582,31547659-31547807,
31547963-31548048,31548249-31548333,31548642-31548725,
31548820-31548893,31549035-31549095,31549546-31549614,
31549712-31549795,31549893-31549937
Length = 383
Score = 46.0 bits (104), Expect = 3e-05
Identities = 36/116 (31%), Positives = 49/116 (42%), Gaps = 3/116 (2%)
Frame = -1
Query: 626 KPIIAAVNGFALGGGCELAMLCDIIYAGEKAKFGQPEINIGTIPGAGGT---QRLPRYVG 456
K +A VNG +GGG + EK F PE ++G + RLP Y+G
Sbjct: 109 KTAVALVNGLVMGGGAAMVAPLKFAVVTEKTVFATPEASVGLHTDCSFSYIHSRLPGYLG 168
Query: 455 KSKAMEIVLTGNFFDAHEAEKMGLVSKVFPVEKLLEETIKLAERIGTHSPLIVKLA 288
+ + LTG +A E GL + P EK LEE K + T V+ A
Sbjct: 169 E----YLALTGARLNAKEMIAAGLATHFVPSEK-LEELEKCLLNLNTGDESAVRAA 219
>01_07_0023 + 40556545-40556629,40558063-40558253
Length = 91
Score = 45.2 bits (102), Expect = 5e-05
Identities = 27/87 (31%), Positives = 49/87 (56%), Gaps = 1/87 (1%)
Frame = -1
Query: 404 EAEKMGLVSKVFPVEKLLEETI-KLAERIGTHSPLIVKLAKQAVNQAYETTLKSGLQFEK 228
EA++MGLV++VF ++ L+ + K+A+ I S V K + ++ + T++ GL+
Sbjct: 2 EAKEMGLVTRVFNSKQELDAGVAKIAKEISEKSAWAVMGTKAVLLRSRDITVEQGLEHVA 61
Query: 227 STFYGTFATEDRKEGMTAFVEKRPPNF 147
+ + D +E + AF+EKR P F
Sbjct: 62 TWNAAMLRSNDLEEAIQAFLEKRKPVF 88
>05_06_0162 - 26080750-26081478
Length = 242
Score = 38.7 bits (86), Expect = 0.004
Identities = 30/104 (28%), Positives = 47/104 (45%), Gaps = 3/104 (2%)
Frame = -1
Query: 623 PIIAAVNGFALGGGCELAMLCDI-IYAGEKAKFGQPEINIG-TIPGAGGTQRLPRYVGKS 450
P +AAV G A GG L + D + ++ EI+IG +P +
Sbjct: 96 PTVAAVTGHASAGGFLLTLCHDYRLMRADRGVLYMSEIDIGLPLPPYFVAILRAKITAAH 155
Query: 449 KAMEIVLTGNFFDAHEAEKMGLVSKVFP-VEKLLEETIKLAERI 321
++ L G A EA++MG+V V P + E +KLAE++
Sbjct: 156 ALRDVTLRGRKLKAAEAKEMGIVDVVCPTAAETAAEAVKLAEQL 199
>10_08_0871 -
21181798-21181917,21182024-21182065,21182162-21182191,
21182227-21182328,21182414-21182512,21182824-21182884,
21183447-21183568,21183673-21183758,21183880-21183964,
21184125-21184208,21184292-21184371,21184722-21184785,
21184859-21184927,21185263-21185343,21185438-21185578
Length = 421
Score = 33.9 bits (74), Expect = 0.11
Identities = 26/110 (23%), Positives = 49/110 (44%)
Frame = -1
Query: 626 KPIIAAVNGFALGGGCELAMLCDIIYAGEKAKFGQPEINIGTIPGAGGTQRLPRYVGKSK 447
KP +A ++G +GGG +++ ++ F PE++IG P A + L G
Sbjct: 143 KPHVAILDGVTMGGGGGVSIPGTFRIVTDRTVFATPEVHIGFHPDAAASFYLSHLTG-HV 201
Query: 446 AMEIVLTGNFFDAHEAEKMGLVSKVFPVEKLLEETIKLAERIGTHSPLIV 297
+ LTG + + +GL + ++L +LA + T P ++
Sbjct: 202 GEYLALTGEKLNGVDMIALGLATHYSMSDRLNLVDERLATLL-TDDPSVI 250
>10_08_1007 -
22210263-22210400,22210506-22210547,22210626-22210727,
22212239-22212337,22212413-22212473,22213311-22213432,
22217700-22217786,22217958-22218041,22218141-22218220,
22218404-22218467,22218904-22218972,22219099-22219179,
22219626-22219694,22220108-22220140
Length = 376
Score = 33.5 bits (73), Expect = 0.15
Identities = 17/62 (27%), Positives = 27/62 (43%)
Frame = -1
Query: 641 ISNCGKPIIAAVNGFALGGGCELAMLCDIIYAGEKAKFGQPEINIGTIPGAGGTQRLPRY 462
I+ KP ++ + G +GGG +++ E F PE +G P G + L R
Sbjct: 125 IATYNKPQVSLLTGIVMGGGAGVSIHGRFRVVTESTVFAMPETALGLFPDIGASYFLSRL 184
Query: 461 VG 456
G
Sbjct: 185 PG 186
>02_05_0607 -
30315982-30316215,30316688-30316831,30316902-30316989,
30317829-30317934,30318398-30318552,30318630-30318699,
30319940-30320106,30320827-30320894,30322764-30322867,
30322937-30323107,30323113-30323238,30323496-30323663,
30323725-30323908,30324139-30324534
Length = 726
Score = 31.5 bits (68), Expect = 0.60
Identities = 22/81 (27%), Positives = 41/81 (50%)
Frame = -1
Query: 626 KPIIAAVNGFALGGGCELAMLCDIIYAGEKAKFGQPEINIGTIPGAGGTQRLPRYVGKSK 447
KP++A+++ A GG +AM +I A + G +IG + G Q+L + +K
Sbjct: 497 KPVVASMSDVAASGGYYMAMAAPVIVAEKLTLTG----SIGVVTGKFILQKLYERIDFNK 552
Query: 446 AMEIVLTGNFFDAHEAEKMGL 384
EI+ G + + + A++ L
Sbjct: 553 --EIISKGRYAELNAADQRPL 571
>01_06_1114 +
34619597-34619972,34620772-34620852,34621294-34621394,
34621958-34622045,34622192-34622457
Length = 303
Score = 31.1 bits (67), Expect = 0.80
Identities = 14/38 (36%), Positives = 18/38 (47%)
Frame = -2
Query: 565 CAISSMPAKRRNSVSPRSTLAPSPEPEAPSVFPDTLAS 452
CA+ +P S SP + L PS EP+ P P S
Sbjct: 124 CALLGVPVPMAPSASPMAGLGPSTEPQMPEKSPSASPS 161
>12_02_0410 +
18701258-18701327,18701398-18701630,18701782-18702639,
18703006-18703865,18704285-18704395,18704486-18704567,
18704643-18704735,18704795-18704989
Length = 833
Score = 30.7 bits (66), Expect = 1.1
Identities = 18/56 (32%), Positives = 29/56 (51%)
Frame = -2
Query: 571 QCCAISSMPAKRRNSVSPRSTLAPSPEPEAPSVFPDTLASRKQWRSC*QETSLMLM 404
Q S P R+ S++P+S LAP + P PDT S++Q +C +++M
Sbjct: 479 QAAPNSPTPLPRQPSLAPQSYLAPPLDERVPPPQPDT--SKEQPNTCEARKLILVM 532
>01_01_0409 -
3084821-3084988,3085069-3085155,3085270-3085476,
3085904-3085985,3086085-3086275,3086410-3086616,
3086709-3086871,3087905-3087960,3088035-3088148,
3088599-3089807
Length = 827
Score = 30.3 bits (65), Expect = 1.4
Identities = 18/49 (36%), Positives = 24/49 (48%)
Frame = -2
Query: 544 AKRRNSVSPRSTLAPSPEPEAPSVFPDTLASRKQWRSC*QETSLMLMKP 398
A RR + SP + AP+P P PS D+ S + S +ET L P
Sbjct: 26 AARRPAPSPAAAAAPAPSPSNPSAVSDSDPS--SYSSSGEETDLTASDP 72
>02_02_0704 +
13095449-13095584,13095671-13095990,13096102-13096423,
13096556-13096632,13096744-13097127
Length = 412
Score = 29.1 bits (62), Expect = 3.2
Identities = 14/34 (41%), Positives = 16/34 (47%)
Frame = -2
Query: 541 KRRNSVSPRSTLAPSPEPEAPSVFPDTLASRKQW 440
K S R + P P PEA V PD L S + W
Sbjct: 102 KEEAETSERHSSPPPPPPEAKKVTPDWLQSVQLW 135
>03_03_0160 + 14957139-14957603,14958054-14958113,14959012-14959776
Length = 429
Score = 28.7 bits (61), Expect = 4.2
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +3
Query: 468 GKTLGASGSGDGANVDLGLTEFR 536
G+ LG+S S +DLGL EFR
Sbjct: 77 GRILGSSSSSPSGGLDLGLEEFR 99
>08_01_0421 - 3735155-3736067,3736154-3736176
Length = 311
Score = 28.3 bits (60), Expect = 5.6
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = -3
Query: 519 RDQHWHHPRSRRHPASSQIRW 457
RDQ HHPR RR S + W
Sbjct: 105 RDQVTHHPRGRRAHRSGPLEW 125
>06_03_0868 -
25544933-25544938,25544939-25545142,25545494-25545751,
25546625-25546906
Length = 249
Score = 28.3 bits (60), Expect = 5.6
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = -2
Query: 550 MPAKRRNSVSPRSTLAPSPEPEAPSV 473
+PA RR S+ PR+T +P P +P++
Sbjct: 16 LPAPRRPSLPPRATSILTPAPRSPAL 41
>01_06_1411 + 37127098-37128279
Length = 393
Score = 28.3 bits (60), Expect = 5.6
Identities = 16/36 (44%), Positives = 19/36 (52%)
Frame = -2
Query: 565 CAISSMPAKRRNSVSPRSTLAPSPEPEAPSVFPDTL 458
CA +S P+ R SV P LAP P P P+ TL
Sbjct: 18 CAAASFPSVLRRSVGPAPVLAPLP-PLDPARLNATL 52
>01_01_0746 + 5772340-5773083
Length = 247
Score = 28.3 bits (60), Expect = 5.6
Identities = 24/105 (22%), Positives = 47/105 (44%), Gaps = 4/105 (3%)
Frame = -1
Query: 623 PIIAAVNGFALGGGCELAMLCD-IIYAGEKAKFGQPEINIGTIPGAGGTQRLPRYVGKS- 450
P +AAV G A GC LA+ D ++ + E++ G + + + V +
Sbjct: 101 PTVAAVTGHAAAAGCALALAHDAVVMRASRGFLYMSEVDAGLKIVDFFAELIRQKVPDAV 160
Query: 449 KAMEIVLTGNFFDAHEAEKMGLVSKVFP--VEKLLEETIKLAERI 321
++VL G+ A +A + G+V V+ ++ ++ AE +
Sbjct: 161 NRRDLVLRGDKMTAADALRRGIVDAAVDGGVDDVVAAAVREAEAL 205
>01_01_0219 + 1863478-1864041,1864459-1865109
Length = 404
Score = 28.3 bits (60), Expect = 5.6
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = -2
Query: 523 SPRSTLAPSPEPEAPSVFPDTLAS 452
S R + PSP PE P V+P L S
Sbjct: 54 SSRPIMQPSPSPETPCVWPPPLPS 77
>07_01_0139 -
1014952-1015165,1015271-1015350,1015420-1015629,
1015925-1016044,1016650-1016709,1017129-1017204,
1018189-1018352,1018428-1018490,1018815-1018902,
1018997-1019647,1019965-1020449
Length = 736
Score = 27.9 bits (59), Expect = 7.4
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +1
Query: 568 IASSQPPPRAKPLTAAMMGFP 630
+A+S PPPR + T+A +G P
Sbjct: 83 VANSSPPPRGRASTSAAVGHP 103
>05_05_0133 +
22614219-22614651,22614767-22615671,22615918-22616224,
22616307-22616380
Length = 572
Score = 27.9 bits (59), Expect = 7.4
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -1
Query: 629 GKPIIAAVNGFALGGGCELAMLCDIIYAGEKAKFGQ 522
GK ++A A GGG + ++ D++YA A G+
Sbjct: 45 GKVVVAMDEDAAAGGGVGVGVVSDLLYATGSAAVGE 80
>04_03_0070 + 10677677-10679989
Length = 770
Score = 27.9 bits (59), Expect = 7.4
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +2
Query: 425 LSTRSPLLSTCQRIWEDAGCLRLRGWCQ 508
+ PL+ C +WED ++RGWC+
Sbjct: 527 MEAERPLVGQCLPLWEDLRG-KVRGWCR 553
>03_05_0376 -
23598026-23598136,23598395-23598484,23598870-23598935,
23599743-23599811,23599890-23599998,23600135-23600232,
23600339-23600420,23601163-23601242,23601346-23601516,
23601671-23601735,23601842-23601986,23602072-23602245,
23602498-23602572,23602831-23602959,23603295-23603432,
23603509-23603610,23604008-23604112,23604282-23604399,
23605752-23605909,23606159-23606261,23606515-23606582,
23606940-23607016,23608635-23608806
Length = 834
Score = 27.9 bits (59), Expect = 7.4
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +1
Query: 7 ARFFLSIYKSYKQYYTSHLISLTA*QITKHFQQHRKLE 120
A+F+ +SY+Q T H+ SL Q + FQ RK++
Sbjct: 699 AKFYHEASESYEQACTRHISSLIYLQFERLFQFSRKVD 736
>01_01_0186 +
1598046-1598234,1599215-1599277,1599359-1599448,
1599968-1600093,1600583-1600726,1600845-1601255,
1601283-1601364,1601403-1601491,1602250-1602471,
1602552-1602827,1603116-1603253,1603772-1604077,
1604203-1604421
Length = 784
Score = 27.9 bits (59), Expect = 7.4
Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 7/65 (10%)
Frame = -1
Query: 641 ISNCGKPIIAA----VNGFALGGGCELAMLCD---IIYAGEKAKFGQPEINIGTIPGAGG 483
++ KP+I A +N + G L + D I+Y+ E PE+ IG G+GG
Sbjct: 133 LAKLAKPLIGAARIVINSIHIKGDLLLLPILDGEAILYSFEST----PEVRIGVAFGSGG 188
Query: 482 TQRLP 468
+Q +P
Sbjct: 189 SQAVP 193
>07_01_0632 + 4729426-4731300
Length = 624
Score = 27.5 bits (58), Expect = 9.8
Identities = 20/65 (30%), Positives = 29/65 (44%)
Frame = +1
Query: 277 TACLANFTINGEWVPILSASLMVSSKSFSTGNTLLTRPIFSAS*ASKKFPVNTISIAFDL 456
TA A G W + ASL++ + S +T + P AS + +NT+S DL
Sbjct: 33 TAAFARQVAVGRWFTVF-ASLLILTASGATYIFGIYSPALKASLGYDQHTLNTVSFFKDL 91
Query: 457 PTYLG 471
LG
Sbjct: 92 GANLG 96
>02_05_0500 - 29538409-29539283,29540306-29541641
Length = 736
Score = 27.5 bits (58), Expect = 9.8
Identities = 14/48 (29%), Positives = 21/48 (43%)
Frame = +3
Query: 414 KEVSCQHDLHCFRLANVSGKTLGASGSGDGANVDLGLTEFRLFAGIDD 557
+ +SC + C +L K GA+G G G L + RL D+
Sbjct: 585 RRISCSNPAGCSQLLEAVWKLHGAAGGGGGGGRILEAVDQRLAGEFDE 632
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,320,387
Number of Sequences: 37544
Number of extensions: 494774
Number of successful extensions: 1624
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 1543
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1617
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1620349964
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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