Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt10e12
(650 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z27079-6|CAA81594.1| 288|Caenorhabditis elegans Hypothetical pr... 240 5e-64
AL132876-4|CAC48118.1| 256|Caenorhabditis elegans Hypothetical ... 227 5e-60
AF045646-15|AAK29838.1| 284|Caenorhabditis elegans Enoyl-coa hy... 120 7e-28
U53339-3|AAA96199.1| 278|Caenorhabditis elegans Hypothetical pr... 95 3e-20
U50307-3|AAA92304.1| 258|Caenorhabditis elegans Enoyl-coa hydra... 95 3e-20
Z77660-10|CAB01180.1| 283|Caenorhabditis elegans Hypothetical p... 91 6e-19
AF125459-14|AAD12843.1| 297|Caenorhabditis elegans Hypothetical... 89 2e-18
Z46240-4|CAA86314.1| 255|Caenorhabditis elegans Hypothetical pr... 81 7e-16
AF000263-3|AAL77185.1| 697|Caenorhabditis elegans Hypothetical ... 79 4e-15
AF000263-2|AAK21464.1| 755|Caenorhabditis elegans Hypothetical ... 79 4e-15
AF000263-1|AAK21462.1| 781|Caenorhabditis elegans Hypothetical ... 79 4e-15
Z81043-1|CAB02799.1| 755|Caenorhabditis elegans Hypothetical pr... 78 6e-15
Z46794-8|CAA86779.1| 385|Caenorhabditis elegans Hypothetical pr... 58 4e-09
U88308-10|AAB42326.2| 268|Caenorhabditis elegans Hypothetical p... 50 1e-06
U00050-8|AAM22062.1| 363|Caenorhabditis elegans Hypothetical pr... 45 5e-05
U00050-7|AAA50696.1| 386|Caenorhabditis elegans Hypothetical pr... 45 5e-05
U39652-8|AAK82909.1| 334|Caenorhabditis elegans Protein kinase ... 33 0.18
U39652-7|AAA80405.2| 366|Caenorhabditis elegans Protein kinase ... 33 0.18
U39652-6|ABI18144.1| 376|Caenorhabditis elegans Protein kinase ... 33 0.18
J05220-1|AAA27980.1| 376|Caenorhabditis elegans protein ( C.ele... 33 0.18
Z75711-3|CAB00035.3| 1204|Caenorhabditis elegans Hypothetical pr... 29 2.2
Z75531-9|CAA99802.1| 277|Caenorhabditis elegans Hypothetical pr... 29 2.9
AY728060-1|AAU43721.1| 277|Caenorhabditis elegans cadmium-induc... 29 2.9
Z77133-2|CAB00864.2| 664|Caenorhabditis elegans Hypothetical pr... 29 3.8
U00044-6|AAA50679.2| 670|Caenorhabditis elegans Bard homolog (t... 28 5.0
AL033509-1|CAA22059.1| 1494|Caenorhabditis elegans Hypothetical ... 28 5.0
Z73971-3|CAA98253.1| 265|Caenorhabditis elegans Hypothetical pr... 28 6.6
AF039051-5|AAB94265.2| 509|Caenorhabditis elegans Hypothetical ... 28 6.6
Z81522-2|CAB04238.1| 415|Caenorhabditis elegans Hypothetical pr... 27 8.7
L11247-9|AAK84522.2| 639|Caenorhabditis elegans Hypothetical pr... 27 8.7
>Z27079-6|CAA81594.1| 288|Caenorhabditis elegans Hypothetical
protein T05G5.6 protein.
Length = 288
Score = 240 bits (588), Expect = 5e-64
Identities = 111/171 (64%), Positives = 139/171 (81%)
Frame = -1
Query: 650 WEDISNCGKPIIAAVNGFALGGGCELAMLCDIIYAGEKAKFGQPEINIGTIPGAGGTQRL 471
W +S+ KP+IAAVNGFALGGG ELAM+CDIIYAGEKA+FGQPEINIGTIPGAGGTQR
Sbjct: 118 WTAVSDVKKPVIAAVNGFALGGGNELAMMCDIIYAGEKARFGQPEINIGTIPGAGGTQRW 177
Query: 470 PRYVGKSKAMEIVLTGNFFDAHEAEKMGLVSKVFPVEKLLEETIKLAERIGTHSPLIVKL 291
R GKS AME+ LTGN A EA++ G+VSK+FP ++++ E +KL E+I SPLIV++
Sbjct: 178 ARAAGKSFAMEVCLTGNHVTAQEAKEHGIVSKIFPADQVVGEAVKLGEKIADQSPLIVQM 237
Query: 290 AKQAVNQAYETTLKSGLQFEKSTFYGTFATEDRKEGMTAFVEKRPPNFKNE 138
AK+AVN+AYE TL+ GL FE+ F+ TFAT+DRKEGMTAF EKR P ++++
Sbjct: 238 AKEAVNKAYELTLQEGLHFERRLFHATFATKDRKEGMTAFAEKRKPQWESK 288
>AL132876-4|CAC48118.1| 256|Caenorhabditis elegans Hypothetical
protein Y105E8A.4 protein.
Length = 256
Score = 227 bits (555), Expect = 5e-60
Identities = 106/168 (63%), Positives = 132/168 (78%)
Frame = -1
Query: 650 WEDISNCGKPIIAAVNGFALGGGCELAMLCDIIYAGEKAKFGQPEINIGTIPGAGGTQRL 471
W+ +S+ KP+IAAVNGFALGGG ELA++CDI+YAGE A FGQPEI IGTIPG GGTQR
Sbjct: 86 WDTLSHITKPVIAAVNGFALGGGTELALMCDIVYAGENAIFGQPEITIGTIPGLGGTQRW 145
Query: 470 PRYVGKSKAMEIVLTGNFFDAHEAEKMGLVSKVFPVEKLLEETIKLAERIGTHSPLIVKL 291
PRYV KS AMEI L+G+ A EA++ GLVSKVFPV++L+ E + LA+RI +SPLIVK
Sbjct: 146 PRYVSKSVAMEICLSGDRLGAQEAKEDGLVSKVFPVQQLVGEAVLLADRIAKNSPLIVKT 205
Query: 290 AKQAVNQAYETTLKSGLQFEKSTFYGTFATEDRKEGMTAFVEKRPPNF 147
K+++N AY+T+L GL+ EK F TFAT DR+EGM+AF EKR P +
Sbjct: 206 VKRSLNSAYQTSLNQGLEMEKQLFQSTFATNDRREGMSAFAEKRAPKW 253
>AF045646-15|AAK29838.1| 284|Caenorhabditis elegans Enoyl-coa
hydratase protein 5 protein.
Length = 284
Score = 120 bits (290), Expect = 7e-28
Identities = 60/142 (42%), Positives = 89/142 (62%)
Frame = -1
Query: 644 DISNCGKPIIAAVNGFALGGGCELAMLCDIIYAGEKAKFGQPEINIGTIPGAGGTQRLPR 465
D+ +P+IAA++GFALGGG ELA+ CDI A +KAK G E IPGAGG+QRL R
Sbjct: 120 DVERLPQPVIAAIDGFALGGGLELALACDIRVASQKAKMGLVETKWALIPGAGGSQRLYR 179
Query: 464 YVGKSKAMEIVLTGNFFDAHEAEKMGLVSKVFPVEKLLEETIKLAERIGTHSPLIVKLAK 285
VG +KA E++ T + +A K+G+V+ V +E+++++A +I P+ VKLAK
Sbjct: 180 IVGVAKAKELIYTAEVLNGADAAKLGVVNHVVEANP-IEKSLEIARKIIPRGPIAVKLAK 238
Query: 284 QAVNQAYETTLKSGLQFEKSTF 219
A+N +T + S L E+ +
Sbjct: 239 LAINLGSQTDITSALSVEQQCY 260
>U53339-3|AAA96199.1| 278|Caenorhabditis elegans Hypothetical
protein F58A6.1 protein.
Length = 278
Score = 95.5 bits (227), Expect = 3e-20
Identities = 53/164 (32%), Positives = 89/164 (54%), Gaps = 2/164 (1%)
Frame = -1
Query: 641 ISNCGKPIIAAVNGFALGGGCELAMLCDIIYAGEKAKFGQPEINIGTIPGAGGTQRLPRY 462
I C KP+I A++G+ LG ++A CD+ A + A E++IG G RLP+
Sbjct: 108 IDECSKPVILAMHGYCLGAALDIATACDVRVATKDAVLSVKEVDIGMAADVGTLNRLPKI 167
Query: 461 VGK-SKAMEIVLTGNFFDAHEAEKMGLVSKVFPV-EKLLEETIKLAERIGTHSPLIVKLA 288
VG S +I L+ F A EA + GL+S+V+ E+++ E +K+A+ I SP+ V+
Sbjct: 168 VGNHSWIKDISLSARHFSAGEALQFGLLSRVYDTREEMINEVLKMAKLIALKSPVGVQGT 227
Query: 287 KQAVNQAYETTLKSGLQFEKSTFYGTFATEDRKEGMTAFVEKRP 156
K A+N A + T+++ L + + T+D + A + K+P
Sbjct: 228 KNALNYARDHTVENSLNYVATWNMSQLFTDDIMKASMASLSKQP 271
>U50307-3|AAA92304.1| 258|Caenorhabditis elegans Enoyl-coa
hydratase protein 3 protein.
Length = 258
Score = 95.5 bits (227), Expect = 3e-20
Identities = 52/156 (33%), Positives = 87/156 (55%)
Frame = -1
Query: 626 KPIIAAVNGFALGGGCELAMLCDIIYAGEKAKFGQPEINIGTIPGAGGTQRLPRYVGKSK 447
KP+IAA+ GFA+ GG EL+++ D+ + AKFG +G GGT RLPR +G +
Sbjct: 99 KPLIAAIEGFAVAGGLELSLMADLRVSSPSAKFGVFCRRVGVPLIDGGTVRLPRVIGLGR 158
Query: 446 AMEIVLTGNFFDAHEAEKMGLVSKVFPVEKLLEETIKLAERIGTHSPLIVKLAKQAVNQA 267
A++++LTG A EA + GLV+++ K +EE +KL + I +H + + +++ +
Sbjct: 159 ALDMILTGREVGAQEALQWGLVNRISDEGKAVEEAVKLGKLIASHPEICMLADRESTYYS 218
Query: 266 YETTLKSGLQFEKSTFYGTFATEDRKEGMTAFVEKR 159
E T ++E F T + +G F+EK+
Sbjct: 219 LEHTEHESFEYE---FGSTKVLAESIKGAQQFMEKQ 251
>Z77660-10|CAB01180.1| 283|Caenorhabditis elegans Hypothetical
protein F38H4.8 protein.
Length = 283
Score = 91.1 bits (216), Expect = 6e-19
Identities = 53/167 (31%), Positives = 85/167 (50%)
Frame = -1
Query: 641 ISNCGKPIIAAVNGFALGGGCELAMLCDIIYAGEKAKFGQPEINIGTIPGAGGTQRLPRY 462
I N P+IA VNG A G +L CD++ AG+ +KF P +G G L R
Sbjct: 107 IRNMKVPVIAEVNGTAAAAGLQLVASCDVVVAGKSSKFLVPGQKLGLFCSTPGIA-LVRA 165
Query: 461 VGKSKAMEIVLTGNFFDAHEAEKMGLVSKVFPVEKLLEETIKLAERIGTHSPLIVKLAKQ 282
V + AM+++LT D+ A + GLVS+V +++ E + +AE+IG S + L K
Sbjct: 166 VPRKVAMDMLLTAQPIDSEAALRSGLVSRVVEDDQVKFEALNVAEQIGHFSRSVTALGKA 225
Query: 281 AVNQAYETTLKSGLQFEKSTFYGTFATEDRKEGMTAFVEKRPPNFKN 141
E + ++ G +D +EG++AF+ KRP +F++
Sbjct: 226 FFYTQAELSTVDAYRYGSRVMVGNLKLKDCQEGISAFIGKRPADFEH 272
>AF125459-14|AAD12843.1| 297|Caenorhabditis elegans Hypothetical
protein Y25C1A.13 protein.
Length = 297
Score = 89.4 bits (212), Expect = 2e-18
Identities = 51/169 (30%), Positives = 84/169 (49%), Gaps = 2/169 (1%)
Frame = -1
Query: 641 ISNCGKPIIAAVNGFALGGGCELAMLCDIIYAGEKAKFGQPEINIGTIPGAGGTQRLPRY 462
+ C KPIIA+++ LG G +L CDI A + A F E+++G G R+ +
Sbjct: 128 LERCPKPIIASIHSHCLGAGIDLITACDIRVASQDAIFSIREVDVGLAADIGTLNRIQKV 187
Query: 461 VGK-SKAMEIVLTGNFFDAHEAEKMGLVSKVF-PVEKLLEETIKLAERIGTHSPLIVKLA 288
VG S ++ T F A EA + GL+S+++ + LLE +I +A RI SP+ V+
Sbjct: 188 VGNDSWTRDVAFTARDFGADEALRFGLISRIYDDRQSLLENSIDMAARIAEKSPIAVQGT 247
Query: 287 KQAVNQAYETTLKSGLQFEKSTFYGTFATEDRKEGMTAFVEKRPPNFKN 141
K+ +N A E + L F K+ + D A + K+ +++
Sbjct: 248 KETLNYAREHSTDDSLNFIKTWNMSQLLSTDLLSSAMAVMNKKKATYED 296
>Z46240-4|CAA86314.1| 255|Caenorhabditis elegans Hypothetical
protein B0272.4 protein.
Length = 255
Score = 81.0 bits (191), Expect = 7e-16
Identities = 49/152 (32%), Positives = 78/152 (51%), Gaps = 1/152 (0%)
Frame = -1
Query: 626 KPIIAAVNGFALGGGCELAMLCDIIYAGEKAKFGQPEINIGTIPGAGGTQRLPRYVGKSK 447
KPIIA VNG A+G + + D + A + A F P +IG P A + LPR +G K
Sbjct: 96 KPIIALVNGHAVGVSVTMLGVMDAVIAIDTATFATPFADIGVCPEACSSYTLPRIMGHQK 155
Query: 446 AMEIVLTGNFFDAHEAEKMGLVSKVFPVEKLLEETIKLAERIGTHSPLIVKLAKQAVNQA 267
A +++ F AHEA GLV+++ P ++ K+ +R SP+ +K+AK+ +
Sbjct: 156 AAALMMFSEKFTAHEAHIAGLVTQILPAATFEKDAKKIIDRYSKLSPITMKVAKELMRTT 215
Query: 266 -YETTLKSGLQFEKSTFYGTFATEDRKEGMTA 174
+ L + + E+ G F+ ED +TA
Sbjct: 216 QIKDELLTVNRKEQVHLNGMFSHEDTIARLTA 247
>AF000263-3|AAL77185.1| 697|Caenorhabditis elegans Hypothetical
protein T08B2.7c protein.
Length = 697
Score = 78.6 bits (185), Expect = 4e-15
Identities = 37/92 (40%), Positives = 55/92 (59%), Gaps = 2/92 (2%)
Frame = -1
Query: 641 ISNCGKPIIAAVNGFALGGGCELAMLCD--IIYAGEKAKFGQPEINIGTIPGAGGTQRLP 468
I KP++AA+ G +GGG ELA+ C I +K PE+ +G +PGAGGTQRLP
Sbjct: 148 IEKSQKPVVAAIMGSCMGGGLELALACHYRIAVNDKKTLLSLPEVMLGLLPGAGGTQRLP 207
Query: 467 RYVGKSKAMEIVLTGNFFDAHEAEKMGLVSKV 372
+ +++ LTG A +A+K+G+V +V
Sbjct: 208 KLTTVQNVLDLTLTGKKIKADKAKKIGIVDRV 239
>AF000263-2|AAK21464.1| 755|Caenorhabditis elegans Hypothetical
protein T08B2.7b protein.
Length = 755
Score = 78.6 bits (185), Expect = 4e-15
Identities = 37/92 (40%), Positives = 55/92 (59%), Gaps = 2/92 (2%)
Frame = -1
Query: 641 ISNCGKPIIAAVNGFALGGGCELAMLCD--IIYAGEKAKFGQPEINIGTIPGAGGTQRLP 468
I KP++AA+ G +GGG ELA+ C I +K PE+ +G +PGAGGTQRLP
Sbjct: 122 IEKSQKPVVAAIMGSCMGGGLELALACHYRIAVNDKKTLLSLPEVMLGLLPGAGGTQRLP 181
Query: 467 RYVGKSKAMEIVLTGNFFDAHEAEKMGLVSKV 372
+ +++ LTG A +A+K+G+V +V
Sbjct: 182 KLTTVQNVLDLTLTGKKIKADKAKKIGIVDRV 213
>AF000263-1|AAK21462.1| 781|Caenorhabditis elegans Hypothetical
protein T08B2.7a protein.
Length = 781
Score = 78.6 bits (185), Expect = 4e-15
Identities = 37/92 (40%), Positives = 55/92 (59%), Gaps = 2/92 (2%)
Frame = -1
Query: 641 ISNCGKPIIAAVNGFALGGGCELAMLCD--IIYAGEKAKFGQPEINIGTIPGAGGTQRLP 468
I KP++AA+ G +GGG ELA+ C I +K PE+ +G +PGAGGTQRLP
Sbjct: 148 IEKSQKPVVAAIMGSCMGGGLELALACHYRIAVNDKKTLLSLPEVMLGLLPGAGGTQRLP 207
Query: 467 RYVGKSKAMEIVLTGNFFDAHEAEKMGLVSKV 372
+ +++ LTG A +A+K+G+V +V
Sbjct: 208 KLTTVQNVLDLTLTGKKIKADKAKKIGIVDRV 239
>Z81043-1|CAB02799.1| 755|Caenorhabditis elegans Hypothetical
protein C29F3.1 protein.
Length = 755
Score = 77.8 bits (183), Expect = 6e-15
Identities = 36/87 (41%), Positives = 54/87 (62%), Gaps = 2/87 (2%)
Frame = -1
Query: 626 KPIIAAVNGFALGGGCELAMLCD--IIYAGEKAKFGQPEINIGTIPGAGGTQRLPRYVGK 453
KPI+AA+ G +GGG E+A+ C I +K G PE+ +G +PG GGTQRLP+
Sbjct: 127 KPIVAAIMGSCMGGGLEIALACHYRIAVNDKKTLLGLPEVTLGIMPGDGGTQRLPKLTTV 186
Query: 452 SKAMEIVLTGNFFDAHEAEKMGLVSKV 372
+++ LTG A++A K+G+V +V
Sbjct: 187 QNVLDLTLTGKRIKANKAMKIGIVDRV 213
>Z46794-8|CAA86779.1| 385|Caenorhabditis elegans Hypothetical
protein R06F6.9 protein.
Length = 385
Score = 58.4 bits (135), Expect = 4e-09
Identities = 38/158 (24%), Positives = 69/158 (43%)
Frame = -1
Query: 635 NCGKPIIAAVNGFALGGGCELAMLCDIIYAGEKAKFGQPEINIGTIPGAGGTQRLPRYVG 456
N KP+IA +NG A+G + + D + A +KA F P +G P + P +G
Sbjct: 224 NHEKPLIALINGPAVGIAVTVLGMFDYVIATDKASFHTPFAPLGQSPEGVSSYTFPLIMG 283
Query: 455 KSKAMEIVLTGNFFDAHEAEKMGLVSKVFPVEKLLEETIKLAERIGTHSPLIVKLAKQAV 276
+A E++L A A+ GLV++V P + K E P +++ K+ +
Sbjct: 284 SLRASEMLLVCKKISAQTAKDYGLVNEVVPDAEFQSHAQKTVEAFSQLPPETLRINKKLL 343
Query: 275 NQAYETTLKSGLQFEKSTFYGTFATEDRKEGMTAFVEK 162
++ L E + +++ + + AF+ K
Sbjct: 344 RSLHKEKLLEVNNIEADQICERWQSKECHQAIAAFMTK 381
>U88308-10|AAB42326.2| 268|Caenorhabditis elegans Hypothetical
protein C32E8.9 protein.
Length = 268
Score = 50.0 bits (114), Expect = 1e-06
Identities = 29/100 (29%), Positives = 45/100 (45%)
Frame = -1
Query: 617 IAAVNGFALGGGCELAMLCDIIYAGEKAKFGQPEINIGTIPGAGGTQRLPRYVGKSKAME 438
IA ++G ALGG E+ DI A +K + +G +P GG + + +G+ +A+
Sbjct: 121 IAKIHGHALGGATEICSSTDIRIAHSGSKIAFFQSKMGIVPSWGGAEYMEGIMGRGRALA 180
Query: 437 IVLTGNFFDAHEAEKMGLVSKVFPVEKLLEETIKLAERIG 318
+ N A EA+ G V V+ E E I G
Sbjct: 181 AMGRANVMSAEEAKDQGYVDYVYKSEDEAENFINQVASAG 220
>U00050-8|AAM22062.1| 363|Caenorhabditis elegans Hypothetical
protein F09F7.4b protein.
Length = 363
Score = 44.8 bits (101), Expect = 5e-05
Identities = 27/88 (30%), Positives = 39/88 (44%)
Frame = -1
Query: 641 ISNCGKPIIAAVNGFALGGGCELAMLCDIIYAGEKAKFGQPEINIGTIPGAGGTQRLPRY 462
I K + ++G +GGGC L++ A EK PE +G P GG+ L R
Sbjct: 108 IGTLNKQYVCLIDGIVMGGGCGLSVNGRFRVATEKTMLAMPETALGLFPDVGGSYFLSRL 167
Query: 461 VGKSKAMEIVLTGNFFDAHEAEKMGLVS 378
G + M + LTG +A GL +
Sbjct: 168 KG-NLGMYLALTGYRLLGADAFHAGLAT 194
>U00050-7|AAA50696.1| 386|Caenorhabditis elegans Hypothetical
protein F09F7.4a protein.
Length = 386
Score = 44.8 bits (101), Expect = 5e-05
Identities = 27/88 (30%), Positives = 39/88 (44%)
Frame = -1
Query: 641 ISNCGKPIIAAVNGFALGGGCELAMLCDIIYAGEKAKFGQPEINIGTIPGAGGTQRLPRY 462
I K + ++G +GGGC L++ A EK PE +G P GG+ L R
Sbjct: 131 IGTLNKQYVCLIDGIVMGGGCGLSVNGRFRVATEKTMLAMPETALGLFPDVGGSYFLSRL 190
Query: 461 VGKSKAMEIVLTGNFFDAHEAEKMGLVS 378
G + M + LTG +A GL +
Sbjct: 191 KG-NLGMYLALTGYRLLGADAFHAGLAT 217
>U39652-8|AAK82909.1| 334|Caenorhabditis elegans Protein kinase
protein 2, isoform b protein.
Length = 334
Score = 33.1 bits (72), Expect = 0.18
Identities = 28/92 (30%), Positives = 41/92 (44%), Gaps = 4/92 (4%)
Frame = -1
Query: 473 LPRYVGKSKAMEIVLTGNFFDAH--EAEKMGLVSKVFPVEKLLEETIKLAERIGTHSPLI 300
+P+ +++E + N AH E E+ + +FPVEK ETI G + +I
Sbjct: 71 IPKDDATRRSLESAMRKNLLFAHLEEDEQKTMYDAMFPVEKSAGETIIEQGEEGDNFYVI 130
Query: 299 VK-LAKQAVNQAYETTLKSGLQF-EKSTFYGT 210
K VN Y T+ G F E + YGT
Sbjct: 131 DKGTVDVYVNHEYVLTINEGGSFGELALIYGT 162
>U39652-7|AAA80405.2| 366|Caenorhabditis elegans Protein kinase
protein 2, isoform a protein.
Length = 366
Score = 33.1 bits (72), Expect = 0.18
Identities = 28/92 (30%), Positives = 41/92 (44%), Gaps = 4/92 (4%)
Frame = -1
Query: 473 LPRYVGKSKAMEIVLTGNFFDAH--EAEKMGLVSKVFPVEKLLEETIKLAERIGTHSPLI 300
+P+ +++E + N AH E E+ + +FPVEK ETI G + +I
Sbjct: 103 IPKDDATRRSLESAMRKNLLFAHLEEDEQKTMYDAMFPVEKSAGETIIEQGEEGDNFYVI 162
Query: 299 VK-LAKQAVNQAYETTLKSGLQF-EKSTFYGT 210
K VN Y T+ G F E + YGT
Sbjct: 163 DKGTVDVYVNHEYVLTINEGGSFGELALIYGT 194
>U39652-6|ABI18144.1| 376|Caenorhabditis elegans Protein kinase
protein 2, isoform c protein.
Length = 376
Score = 33.1 bits (72), Expect = 0.18
Identities = 28/92 (30%), Positives = 41/92 (44%), Gaps = 4/92 (4%)
Frame = -1
Query: 473 LPRYVGKSKAMEIVLTGNFFDAH--EAEKMGLVSKVFPVEKLLEETIKLAERIGTHSPLI 300
+P+ +++E + N AH E E+ + +FPVEK ETI G + +I
Sbjct: 113 IPKDDATRRSLESAMRKNLLFAHLEEDEQKTMYDAMFPVEKSAGETIIEQGEEGDNFYVI 172
Query: 299 VK-LAKQAVNQAYETTLKSGLQF-EKSTFYGT 210
K VN Y T+ G F E + YGT
Sbjct: 173 DKGTVDVYVNHEYVLTINEGGSFGELALIYGT 204
>J05220-1|AAA27980.1| 376|Caenorhabditis elegans protein (
C.elegans cAMP-dependentprotein kinase subunit R mRNA,
complete cds. ).
Length = 376
Score = 33.1 bits (72), Expect = 0.18
Identities = 28/92 (30%), Positives = 41/92 (44%), Gaps = 4/92 (4%)
Frame = -1
Query: 473 LPRYVGKSKAMEIVLTGNFFDAH--EAEKMGLVSKVFPVEKLLEETIKLAERIGTHSPLI 300
+P+ +++E + N AH E E+ + +FPVEK ETI G + +I
Sbjct: 113 IPKDDATRRSLESAMRKNLLFAHLEEDEQKTMYDAMFPVEKSAGETIIEQGEEGDNFYVI 172
Query: 299 VK-LAKQAVNQAYETTLKSGLQF-EKSTFYGT 210
K VN Y T+ G F E + YGT
Sbjct: 173 DKGTVDVYVNHEYVLTINEGGSFGELALIYGT 204
>Z75711-3|CAB00035.3| 1204|Caenorhabditis elegans Hypothetical
protein K02B12.5 protein.
Length = 1204
Score = 29.5 bits (63), Expect = 2.2
Identities = 14/30 (46%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
Frame = -2
Query: 556 SSMPAKRRNSVSPRSTLAPSPE-PEAPSVF 470
SS+ + RNS+SPR +++P+ APSVF
Sbjct: 775 SSLTSNPRNSISPRRSISPTTTVRSAPSVF 804
>Z75531-9|CAA99802.1| 277|Caenorhabditis elegans Hypothetical
protein K01D12.12 protein.
Length = 277
Score = 29.1 bits (62), Expect = 2.9
Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 6/53 (11%)
Frame = +3
Query: 180 HTFFAVLRSKGSIEG------GLLKLQARFEGGLVSLVHSLFGQLHN*RGVGS 320
H F+ +LR K S++ GLL L + F LV LV ++FG R VG+
Sbjct: 140 HLFYVLLRYKSSVDMFYEIIVGLLGLPSAFNAVLVPLVKAVFGSKVYSRCVGA 192
>AY728060-1|AAU43721.1| 277|Caenorhabditis elegans
cadmium-inducible lysosomal proteinCDR-6 protein.
Length = 277
Score = 29.1 bits (62), Expect = 2.9
Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 6/53 (11%)
Frame = +3
Query: 180 HTFFAVLRSKGSIEG------GLLKLQARFEGGLVSLVHSLFGQLHN*RGVGS 320
H F+ +LR K S++ GLL L + F LV LV ++FG R VG+
Sbjct: 140 HLFYVLLRYKSSVDMFYEIIVGLLGLPSAFNAVLVPLVKAVFGSKVYSRCVGA 192
>Z77133-2|CAB00864.2| 664|Caenorhabditis elegans Hypothetical
protein K03A11.4 protein.
Length = 664
Score = 28.7 bits (61), Expect = 3.8
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = -3
Query: 402 SRENGSCQ*SIPSGKTFRRNHQAG*KDRNPLPVNCEVGQTSCEPSLRD 259
+ +N C+ + K+ RRNH G R P PV+CE + +C + +D
Sbjct: 125 TNKNLECRARCHTRKSDRRNH-IGEWMRTPGPVDCEFLEAACSENNQD 171
>U00044-6|AAA50679.2| 670|Caenorhabditis elegans Bard homolog
(tumor suppressorgene bard1) protein 1 protein.
Length = 670
Score = 28.3 bits (60), Expect = 5.0
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = -2
Query: 541 KRRNSVSPRSTLAPSPEPEAPSVFPDTLASRK 446
KR+ S+S + P EPE P P T SRK
Sbjct: 246 KRQASMSASAKKQPKLEPEEPEEVPSTSRSRK 277
>AL033509-1|CAA22059.1| 1494|Caenorhabditis elegans Hypothetical
protein Y113G7C.1 protein.
Length = 1494
Score = 28.3 bits (60), Expect = 5.0
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = +2
Query: 404 HEHQRSFLSTRSPLLSTCQRIW 469
H H F++T+ PL +TC+ W
Sbjct: 1230 HGHPHRFIATQGPLDNTCEDFW 1251
>Z73971-3|CAA98253.1| 265|Caenorhabditis elegans Hypothetical
protein C50H2.5 protein.
Length = 265
Score = 27.9 bits (59), Expect = 6.6
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = -1
Query: 461 VGKSKAMEIVLTGNFFDAHEAEKMGLVSKVFPVEKLLEETIKLAER 324
+GK++A+ L GN FD+ E + G K L+E K AE+
Sbjct: 65 LGKTQAVLCFLKGNHFDSQEIIRRGFYDKRH--HAFLQELFKKAEK 108
>AF039051-5|AAB94265.2| 509|Caenorhabditis elegans Hypothetical
protein C14C6.7 protein.
Length = 509
Score = 27.9 bits (59), Expect = 6.6
Identities = 20/77 (25%), Positives = 33/77 (42%), Gaps = 2/77 (2%)
Frame = -2
Query: 562 AISSMPAKRRNSVSPRSTLAPSPEPEAPSVFPDTLAS--RKQWRSC*QETSLMLMKPRKW 389
A+ +MP +S ST AP+P + +FP + ++W E+ +KW
Sbjct: 58 AVETMPETSTSSFHLSSTAAPAPHSQDYQIFPQNSSDCPFEEWNQIRTESIPNTELHKKW 117
Query: 388 VLSVKYSQWKNF*KKPS 338
+ K S + K PS
Sbjct: 118 LEKWKSSFKYLYHKLPS 134
>Z81522-2|CAB04238.1| 415|Caenorhabditis elegans Hypothetical
protein F32B4.1 protein.
Length = 415
Score = 27.5 bits (58), Expect = 8.7
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = -2
Query: 145 RMNKSFLYFQVFYVVENVLLFVR 77
R++ S +YF +FYV+ V LFV+
Sbjct: 2 RLHASNMYFLIFYVLITVFLFVQ 24
>L11247-9|AAK84522.2| 639|Caenorhabditis elegans Hypothetical
protein F09G8.8 protein.
Length = 639
Score = 27.5 bits (58), Expect = 8.7
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = -3
Query: 306 VNCEVGQTSCEPSLRDHPQIGL 241
+N VGQ S +P+++ H Q+GL
Sbjct: 312 INTLVGQMSLDPNIQKHVQVGL 333
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,875,249
Number of Sequences: 27780
Number of extensions: 396801
Number of successful extensions: 1293
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1215
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1284
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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