Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt10d20
(645 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC530.10c |anc1||adenine nucleotide carrier Anc1|Schizosacchar... 179 4e-46
SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter |Schiz... 77 2e-15
SPBC12D12.05c |||mitochondrial carrier, calcium binding subfamil... 66 5e-12
SPAC139.02c |oac1||anion transporter|Schizosaccharomyces pombe|c... 64 2e-11
SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|c... 62 9e-11
SPCC1442.03 ||SPCC1450.19|ATP-Mg/Pi carrier homolog|Schizosaccha... 58 8e-10
SPAC19G12.05 |||mitochondrial citrate transporter|Schizosaccharo... 54 2e-08
SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomy... 46 6e-06
SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyce... 46 6e-06
SPAC4G9.20c |||mitochondrial carrier with solute carrier repeats... 43 4e-05
SPAC4G8.08 |||iron ion transporter |Schizosaccharomyces pombe|ch... 42 6e-05
SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces ... 41 1e-04
SPAC17H9.08 |||mitochondrial coenzyme A transporter|Schizosaccha... 41 1e-04
SPAC823.10c |||mitochondrial carrier with solute carrier repeats... 41 2e-04
SPBC27B12.09c |||FAD transporter|Schizosaccharomyces pombe|chr 2... 40 2e-04
SPBC1604.04 |||thiamine pyrophosphate transporter|Schizosaccharo... 37 0.003
SPBC83.13 |||mitochondrial tricarboxylic acid transporter|Schizo... 36 0.005
SPBC29A3.11c |||mitochondrial carboxylic acid transporter|Schizo... 31 0.11
SPBC1703.13c |||inorganic phosphate transporter |Schizosaccharom... 31 0.14
SPBC25B2.05 |mis3||rRNA processing protein Mis3|Schizosaccharomy... 28 1.0
SPBC1271.11 |||tricarboxylate transporter |Schizosaccharomyces p... 27 1.8
SPCC18B5.05c |||phosphomethylpyrimidine kinase |Schizosaccharomy... 26 5.3
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 26 5.3
SPAC2F3.01 ||SPAC323.09|mannosyltransferase complex subunit |Sch... 26 5.3
SPAC12B10.09 |||S-adenosylmethionine transporter |Schizosaccharo... 25 7.1
>SPBC530.10c |anc1||adenine nucleotide carrier
Anc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 322
Score = 179 bits (435), Expect = 4e-46
Identities = 92/184 (50%), Positives = 121/184 (65%), Gaps = 3/184 (1%)
Frame = -1
Query: 645 ASGGAAGATXLCFVYPLDFARTRLAADV--GKGDGQREFSGLGNCISKIFKSDGLIGLYR 472
ASGGAAGA L FVY LD+ARTRLA D K G+R+F+GL + K ++SDGL GLYR
Sbjct: 137 ASGGAAGAASLLFVYSLDYARTRLANDAKSAKKGGERQFNGLVDVYRKTYRSDGLRGLYR 196
Query: 471 GFGVSVQGIIIYRASYFGFYDTARG-MLPDPKNTPIVISWAIAQTVTTVAGIISYPFDTV 295
GFG SV GI++YR YFG YDT + +L P + S+ + VTT +G+ SYP DT+
Sbjct: 197 GFGPSVVGIVVYRGLYFGMYDTLKPVVLVGPLEGNFLASFLLGWAVTTGSGVASYPLDTI 256
Query: 294 RRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSAFFKGAFSNVLRGTGGAFVLVLYDEI 115
RRRMMM SG A + Y ++ C I EG +FFKGA +N+LRG GA VL +YD++
Sbjct: 257 RRRMMMTSGEA---VKYSSSFECGRQILAKEGARSFFKGAGANILRGVAGAGVLSIYDQV 313
Query: 114 KKVL 103
+ ++
Sbjct: 314 QLLM 317
Score = 33.5 bits (73), Expect = 0.027
Identities = 27/127 (21%), Positives = 48/127 (37%), Gaps = 7/127 (5%)
Frame = -1
Query: 537 FSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTARGMLPDPKNTPIVIS 358
+ G+G C + +G+I L+RG +V +A F F D + M K
Sbjct: 71 YKGIGECFKRTAAEEGVISLWRGNTANVLRYFPTQALNFAFKDKFKKMFGYKKERDGYAK 130
Query: 357 WAIAQTVT-TVAGIIS----YPFDTVRRRMMMQSGRAK--SDILYKNTIHCWATIAKTEG 199
W + AG S Y D R R+ + AK + + + + +++G
Sbjct: 131 WFAGNLASGGAAGAASLLFVYSLDYARTRLANDAKSAKKGGERQFNGLVDVYRKTYRSDG 190
Query: 198 TSAFFKG 178
++G
Sbjct: 191 LRGLYRG 197
Score = 27.5 bits (58), Expect = 1.8
Identities = 18/82 (21%), Positives = 35/82 (42%), Gaps = 3/82 (3%)
Frame = -1
Query: 393 LPDPKNTPIVISWAIAQTVTTVAGIISYPFDTVRRRMMMQSGRAKSDIL---YKNTIHCW 223
+ + KN+ + + V+ + P + V+ + Q ++ L YK C+
Sbjct: 19 ITETKNSTFFFDFMMGGVSAAVSKTAAAPIERVKLLIQNQDEMIRAGRLSHRYKGIGECF 78
Query: 222 ATIAKTEGTSAFFKGAFSNVLR 157
A EG + ++G +NVLR
Sbjct: 79 KRTAAEEGVISLWRGNTANVLR 100
>SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 298
Score = 77.0 bits (181), Expect = 2e-15
Identities = 52/179 (29%), Positives = 85/179 (47%), Gaps = 3/179 (1%)
Frame = -1
Query: 642 SGGAAGATXLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFG 463
+G AG T V P + + RL DV +++G +C +KI K + ++ LY GF
Sbjct: 110 TGSCAGFTETFVVVPFELMKIRLQ-DVKNAS---KYNGTVDCFTKIVKQERILALYNGFE 165
Query: 462 VSVQGIIIYRASYFGFYDTARGML-PDPKNTPIVISWAIAQTVTTVAG-IISYPFDTVRR 289
++ +++ A YFG R L P + + IA T+ + G +S PFD ++
Sbjct: 166 ATMWRHVVWNAGYFGVIQKIRNSLTPASSRIGEIRNNLIAGTIGGIFGTFLSTPFDVIKS 225
Query: 288 RMMMQSGRAKSDILYKNTIHCWATIAKTEGTSAFFKGAFSNVLR-GTGGAFVLVLYDEI 115
R+ A Y T+A+ EG +A +KG VLR G GG +LV+++ +
Sbjct: 226 RIQTVPRIAGQVPKYNWAYPALVTVAREEGFTALYKGFVPKVLRLGPGGGILLVVFNSV 284
Score = 57.2 bits (132), Expect = 2e-09
Identities = 43/159 (27%), Positives = 70/159 (44%), Gaps = 3/159 (1%)
Frame = -1
Query: 645 ASGGAAGATXLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGF 466
A+G AG + + +YPLD +TR+ VGK D ++G +C+ KI K++G LYRG
Sbjct: 13 AAGAVAGISEVLTLYPLDVVKTRMQLSVGKSD----YNGTFDCLKKIVKNEGPHRLYRGI 68
Query: 465 GVSVQGIIIYRASYFGFYDTARGM---LPDPKNTPIVISWAIAQTVTTVAGIISYPFDTV 295
+ RA F DT + + K++ +S + PF+ +
Sbjct: 69 LPPILMEAPKRALKFASNDTYSKLWRKVFKRKDSSPALSILTGSCAGFTETFVVVPFELM 128
Query: 294 RRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSAFFKG 178
+ R+ +K Y T+ C+ I K E A + G
Sbjct: 129 KIRLQDVKNASK----YNGTVDCFTKIVKQERILALYNG 163
Score = 38.7 bits (86), Expect = 7e-04
Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Frame = -1
Query: 378 NTPIVISWAIAQTVTTVAGIIS-YPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTE 202
N P +++A A V ++ +++ YP D V+ RM + G KSD Y T C I K E
Sbjct: 5 NIPFPVTFA-AGAVAGISEVLTLYPLDVVKTRMQLSVG--KSD--YNGTFDCLKKIVKNE 59
Query: 201 GTSAFFKGAFSNVL 160
G ++G +L
Sbjct: 60 GPHRLYRGILPPIL 73
>SPBC12D12.05c |||mitochondrial carrier, calcium binding
subfamily|Schizosaccharomyces pombe|chr 2|||Manual
Length = 426
Score = 65.7 bits (153), Expect = 5e-12
Identities = 53/193 (27%), Positives = 89/193 (46%), Gaps = 13/193 (6%)
Frame = -1
Query: 642 SGGAAGATXLCFVYPLDFARTRL-AADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGF 466
+GG AG+ F+YP+D + R+ +D+ +G + L N +++KS G+ G YRG
Sbjct: 234 AGGMAGSVAQMFIYPVDTLKFRIQCSDLSRGQHGKSII-LSNA-KELYKSVGIRGYYRGV 291
Query: 465 GVSVQGIIIYRASYFGFYD----TARGMLP-----DPKNT--PIVISWAIAQTVTTVAGI 319
V + G+ Y A+ G ++ T G+L DP++ P + A +
Sbjct: 292 LVGILGMFPYSATDLGTFEGLKRTWIGILASRDNVDPQDVKLPNGLVMAFGALSGSTGAT 351
Query: 318 ISYPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSAFFKGAFSNVLR-GTGGA 142
I +P + +R R+ Q G + Y I C+ K EG +KG N+L+ A
Sbjct: 352 IVFPLNVIRTRLQTQ-GTSAHPATYDGFIDCFYKTTKNEGFRGLYKGLSPNLLKVAPSVA 410
Query: 141 FVLVLYDEIKKVL 103
++Y+ KK L
Sbjct: 411 ISYLVYENCKKWL 423
Score = 46.0 bits (104), Expect = 5e-06
Identities = 38/168 (22%), Positives = 73/168 (43%), Gaps = 7/168 (4%)
Frame = -1
Query: 642 SGGAAGATXLCFVYPLDFARTRLAADVG-KGDGQREFSGLGNCISKIFKSDGLIGLYRGF 466
SGG AG PLD + L +D G K + F+ L + ++ +G+ + G
Sbjct: 133 SGGIAGIVSRTCTAPLDRLKVMLISDTGSKPSPKYPFATLLHTTKVLWNRNGIRSFFVGN 192
Query: 465 GVSVQGIIIYRASYFGFYDTAR---GMLPDPKNTPIVISWAIAQTVTTVAGIISYPFDTV 295
G++V ++ + FG Y+ + G+ +N + S+ +VA + YP DT+
Sbjct: 193 GINVLKVMPESSIKFGTYEAMKRVLGISSSSENHSPLYSYLAGGMAGSVAQMFIYPVDTL 252
Query: 294 RRRMM---MQSGRAKSDILYKNTIHCWATIAKTEGTSAFFKGAFSNVL 160
+ R+ + G+ I+ N + K+ G +++G +L
Sbjct: 253 KFRIQCSDLSRGQHGKSIILSNA----KELYKSVGIRGYYRGVLVGIL 296
Score = 40.3 bits (90), Expect = 2e-04
Identities = 21/59 (35%), Positives = 30/59 (50%)
Frame = -1
Query: 645 ASGGAAGATXLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRG 469
A G +G+T V+PL+ RTRL G + G +C K K++G GLY+G
Sbjct: 340 AFGALSGSTGATIVFPLNVIRTRLQTQ-GTSAHPATYDGFIDCFYKTTKNEGFRGLYKG 397
>SPAC139.02c |oac1||anion transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 320
Score = 64.1 bits (149), Expect = 2e-11
Identities = 52/191 (27%), Positives = 81/191 (42%), Gaps = 11/191 (5%)
Frame = -1
Query: 642 SGGAAGATXLCFVYPLDFARTR--LAADVGKGD-GQREFSGLGNCISKIFKSDGLIGLYR 472
SGG A + P + +TR L + K D +R + +G S I + +G+ GL R
Sbjct: 29 SGGLAACGAVTLTNPFEVIKTRFQLQGQLTKLDPSKRIYKSVGQAFSLIARHEGIRGLQR 88
Query: 471 GFGVSVQGIIIYRASYFGFYDTAR-----GMLPDPKNTPIVISWAIAQTVTTVAGIISYP 307
G G + I GFY+ R L DPK + I+ A + P
Sbjct: 89 GLGTAYVYQICLNGCRLGFYEPIRRTLNTWFLDDPKGNKLAINVASGAGSGLCGALFGSP 148
Query: 306 FDTVRRRMMMQSGR--AKSDILYKNTIHCWATIAKTEGTSAFFKGAFSNVLRGTGGAFV- 136
F V+ RM S + YK+ + ++ I K G F GA + +LR G+ V
Sbjct: 149 FFLVKTRMQSYSPKFPVGQQYGYKHIFNAFSRIIKENGVKGLFVGADAAILRTVSGSSVQ 208
Query: 135 LVLYDEIKKVL 103
L +Y+ K+++
Sbjct: 209 LPIYNWAKRMI 219
Score = 45.6 bits (103), Expect = 6e-06
Identities = 43/167 (25%), Positives = 73/167 (43%), Gaps = 4/167 (2%)
Frame = -1
Query: 645 ASGGAAGATXLCFVYPLDFARTRLAADVGKGD-GQRE-FSGLGNCISKIFKSDGLIGLYR 472
ASG +G F P +TR+ + K GQ+ + + N S+I K +G+ GL+
Sbjct: 133 ASGAGSGLCGALFGSPFFLVKTRMQSYSPKFPVGQQYGYKHIFNAFSRIIKENGVKGLFV 192
Query: 471 GFGVSVQGIIIYRASYFGFYDTARGMLPDPKNTPIVISWAIAQTVTTVAGIISYP--FDT 298
G ++ + + Y+ A+ M+ + + + + G+ FDT
Sbjct: 193 GADAAILRTVSGSSVQLPIYNWAKRMIEHYNLLEEGMIKHLTASAVSGFGVCCTMQIFDT 252
Query: 297 VRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSAFFKGAFSNVLR 157
V RM Q K+ LYKN I C ++EG A +KG +++ R
Sbjct: 253 VMTRMYNQ----KNKELYKNPIDCILKTIRSEGFFALYKGFGAHLAR 295
Score = 29.1 bits (62), Expect = 0.57
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -1
Query: 522 NCISKIFKSDGLIGLYRGFGVSVQGI 445
+CI K +S+G LY+GFG + I
Sbjct: 271 DCILKTIRSEGFFALYKGFGAHLARI 296
>SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 303
Score = 61.7 bits (143), Expect = 9e-11
Identities = 41/154 (26%), Positives = 73/154 (47%), Gaps = 1/154 (0%)
Frame = -1
Query: 642 SGGAAGATXLCFVYPLDFARTRLAADVGKGDGQREFSG-LGNCISKIFKSDGLIGLYRGF 466
+G +G +YP+D +TR+ G R SG + N + KI ++G+ L+RG
Sbjct: 25 AGAFSGILEHSVMYPVDAIKTRMQMLNGVS---RSVSGNIVNSVIKISSTEGVYSLWRGI 81
Query: 465 GVSVQGIIIYRASYFGFYDTARGMLPDPKNTPIVISWAIAQTVTTVAGIISYPFDTVRRR 286
+ G A YF + + + + P+ + A A +T ++ PFD +++R
Sbjct: 82 SSVIMGAGPSHAIYFSVLEFFKSKINASPDRPLASALAGACAIT-ISDAFMTPFDVIKQR 140
Query: 285 MMMQSGRAKSDILYKNTIHCWATIAKTEGTSAFF 184
M + S + YK+ +HC T+ + EG AF+
Sbjct: 141 MQLPSRK------YKSALHCATTVFRNEGLGAFY 168
Score = 33.5 bits (73), Expect = 0.027
Identities = 35/161 (21%), Positives = 65/161 (40%), Gaps = 5/161 (3%)
Frame = -1
Query: 645 ASGGAAGATXL-CFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRG 469
A GA T F+ P D + R+ R++ +C + +F+++GL Y
Sbjct: 117 ALAGACAITISDAFMTPFDVIKQRMQLP------SRKYKSALHCATTVFRNEGLGAFYIS 170
Query: 468 FGVSVQGIIIYRASYFGFYDTARGML-PDPKNTPI--VISWAIAQTVTTVAGIISYPFDT 298
+ + I + A YDT L P+ P +IS ++ +A ++ P D
Sbjct: 171 YPTCIAMSIPFTAIQVATYDTCMSFLNPNAVYDPTSHIISGGLS---GAIASSLTTPLDV 227
Query: 297 VRRRMMMQSGRAKSDI-LYKNTIHCWATIAKTEGTSAFFKG 178
V+ + + + ++ K ++ I G +FFKG
Sbjct: 228 VKTLLQTRGSSSIPEVRKCKGSLDVVRFIYNYGGIPSFFKG 268
>SPCC1442.03 ||SPCC1450.19|ATP-Mg/Pi carrier
homolog|Schizosaccharomyces pombe|chr 3|||Manual
Length = 338
Score = 58.4 bits (135), Expect = 8e-10
Identities = 48/186 (25%), Positives = 87/186 (46%), Gaps = 7/186 (3%)
Frame = -1
Query: 642 SGGAAGATXLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLI-GLYRGF 466
+GG GAT ++ LD +TR A + +++G+ C S I +G+ GLY G
Sbjct: 21 AGGIGGATADFLMHSLDTVKTRQQAALYTN----KYNGMVKCYSTILCEEGVFHGLYSGV 76
Query: 465 GVSVQGIIIYRASYFGFYDTARGMLPDPKNTPIVISWAIAQTVTTV-AGIISYPFDTVRR 289
+ G + A +F Y+ + L N P + + +A V + A ++ P + ++
Sbjct: 77 CPMLIGSLPATALFFSSYEYTKRHLMSNYNLPETLCFLLAGFVGDLFASVVYVPSEVLKT 136
Query: 288 RMMMQ----SGRAKSDILYKNTIHCWATIAKTEGTSAFFKGAFSNVLRGTG-GAFVLVLY 124
R+ +Q + +S+ Y + IAK EG FF G + +LR F L+ Y
Sbjct: 137 RLQLQGRYNNPHFQSNYNYPSFRGAVKQIAKQEGMKTFFYGYRATILRDIPFSGFQLLFY 196
Query: 123 DEIKKV 106
+++++V
Sbjct: 197 EKLRQV 202
Score = 33.9 bits (74), Expect = 0.020
Identities = 14/41 (34%), Positives = 25/41 (60%)
Frame = -1
Query: 531 GLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYD 409
G+ + + ++KS+GL+GL+RGFG + + F FY+
Sbjct: 283 GIRHVLGGLYKSEGLLGLFRGFGPRIFWTSSQSSLMFVFYE 323
>SPAC19G12.05 |||mitochondrial citrate
transporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 291
Score = 54.0 bits (124), Expect = 2e-08
Identities = 50/183 (27%), Positives = 79/183 (43%), Gaps = 5/183 (2%)
Frame = -1
Query: 636 GAAGATXLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVS 457
GA A + + P + +T + D + + + G I +G+ GLYRG +
Sbjct: 112 GAGVAESVLVLTPFESIKTAIIDDRKRPNPR--LKGFLQASRIIVHENGIRGLYRGLAAT 169
Query: 456 VQGIIIYRASYFGFYDTARGMLPDPKNTPIVISWAIAQTVTTVAGIISY----PFDTVRR 289
V F Y++ + L +S V +VAGII+ P DTV+
Sbjct: 170 VARQAANSGVRFTAYNSIKQSLQSRLPPDEKLSTVTTFLVGSVAGIITVYCTQPIDTVKS 229
Query: 288 RMMMQSGRAKSDILYKNTIHCWATIAKTEGTSAFFKGAFSNVLR-GTGGAFVLVLYDEIK 112
RM QS A + YKN+IHC I +G F+ GA + R G V +Y+++
Sbjct: 230 RM--QSLSASKE--YKNSIHCAYKILTQDGLLRFWSGATPRLARLILSGGIVFTVYEKVM 285
Query: 111 KVL 103
++L
Sbjct: 286 EIL 288
Score = 31.1 bits (67), Expect = 0.14
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = -1
Query: 642 SGGAAGATXLCFVYPLDFARTRL 574
+GG AGA + YP +FA+TRL
Sbjct: 23 AGGVAGAIEISITYPAEFAKTRL 45
>SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 361
Score = 45.6 bits (103), Expect = 6e-06
Identities = 51/199 (25%), Positives = 86/199 (43%), Gaps = 22/199 (11%)
Frame = -1
Query: 642 SGGAAGATXLCFVYPLDFARTRLAADVGKGD--------------GQREFSGLGNCISKI 505
+GG AG PLD +TRL +D K R F + +
Sbjct: 54 AGGVAGMLGAIATAPLDVVKTRLQSDFYKDRFLKQTAKSKSPLTAAYRHFMDTCIILKNV 113
Query: 504 FKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTARGMLPD-----PKNTPI-VISWAIAQ 343
+G L+RG G ++ G I R+ F Y + +L D +N+ I +++ AIA
Sbjct: 114 KVHEGTRALFRGLGPNLIGTIPARSINFFSYGNGKRILADLFNNGQENSQIHLMAAAIAG 173
Query: 342 TVTTVAGIISYPFDTVRRRMMM--QSGRAKSDILYKNTIHCWATIAKTEGTSAFFKGAFS 169
+T+ A + P V+ R+ + +SG+A Y+++I C + EG +KG +
Sbjct: 174 VITSAA---TNPIWLVKTRLQLDKKSGQAAQ---YRSSIDCIIKTIRLEGFRGLYKGLSA 227
Query: 168 NVLRGTGGAFVLVLYDEIK 112
++L VLY++ K
Sbjct: 228 SLLGVGESTLQWVLYEKFK 246
>SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 371
Score = 45.6 bits (103), Expect = 6e-06
Identities = 28/86 (32%), Positives = 40/86 (46%), Gaps = 5/86 (5%)
Frame = -1
Query: 642 SGGAAGATXLCFVYPLDFARTRLAA-----DVGKGDGQREFSGLGNCISKIFKSDGLIGL 478
+GGAAG V PLD +TR A G G G + + IF ++G+ GL
Sbjct: 11 AGGAAGLASSLVVAPLDVVKTRKQAQKAFYSTGGGKNTMVLGGTLSSMRTIFHNEGIAGL 70
Query: 477 YRGFGVSVQGIIIYRASYFGFYDTAR 400
YRG G + G + + YF Y+ +
Sbjct: 71 YRGVGPMMLGYLPSWSIYFVVYEKCK 96
Score = 36.7 bits (81), Expect = 0.003
Identities = 34/133 (25%), Positives = 60/133 (45%), Gaps = 1/133 (0%)
Frame = -1
Query: 510 KIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTARGMLPDPKNTPIVISWAIAQTVTT 331
KI+K +GL YRG S+ G ++ F Y+ + L D +A T++
Sbjct: 239 KIYKYEGLAAFYRGLFPSLFG-TLHVGIQFPLYEYFKSFLDDFFGKKSNFHIVLAATLSK 297
Query: 330 V-AGIISYPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSAFFKGAFSNVLRG 154
+ A ++YP + +R R +QS A + + + I ++EG ++ G +N +R
Sbjct: 298 IAASTVTYPHEVLRTR--LQSLDAPT---HNSATLLIRDIWRSEGWRKYYSGMATNFIRT 352
Query: 153 TGGAFVLVLYDEI 115
+ V L EI
Sbjct: 353 IPASSVTFLSFEI 365
Score = 29.9 bits (64), Expect = 0.33
Identities = 15/48 (31%), Positives = 22/48 (45%)
Frame = -1
Query: 246 YKNTIHCWATIAKTEGTSAFFKGAFSNVLRGTGGAFVLVLYDEIKKVL 103
Y NT + I K EG +AF++G F ++ LY+ K L
Sbjct: 230 YNNTFDAFRKIYKYEGLAAFYRGLFPSLFGTLHVGIQFPLYEYFKSFL 277
>SPAC4G9.20c |||mitochondrial carrier with solute carrier
repeats|Schizosaccharomyces pombe|chr 1|||Manual
Length = 302
Score = 42.7 bits (96), Expect = 4e-05
Identities = 38/181 (20%), Positives = 78/181 (43%), Gaps = 3/181 (1%)
Frame = -1
Query: 642 SGGAAGATXLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFG 463
+G + G + P D + RL + + + ++ +C+ KI K++GL Y+G
Sbjct: 23 AGVSGGVAQVLVGQPFDCVKVRLQS---QSNVSPIYNNALDCVKKISKNEGLAAFYKGTV 79
Query: 462 VSVQGIIIYRASYFGFYDTARGMLPDPKNTPIVI-SWAIAQTVTTVA-GIISYPFDTVRR 289
+ + GI + F ++ + TP+ + + ++ ++ +A + P + VR
Sbjct: 80 LPLLGIGFCVSIQFTTFEYCKRFF-SRDGTPVTMPQYYVSGAISGLANSFLVGPVEHVRI 138
Query: 288 RMMMQSGRAKSDILYKNTIHCWATIAKTEGTSAFFKGAFSNVLRGTGG-AFVLVLYDEIK 112
R+ +Q+G+ ++LY C I+ G S KG R G + Y+ +
Sbjct: 139 RLQIQTGK---NVLYHGPWDCIKKISSQYGLSGIMKGYNPTAAREAHGLGMYFLAYEALV 195
Query: 111 K 109
K
Sbjct: 196 K 196
Score = 29.9 bits (64), Expect = 0.33
Identities = 16/58 (27%), Positives = 23/58 (39%)
Frame = -1
Query: 639 GGAAGATXLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGF 466
G AG YP D ++++ D + + C I+ GL G YRGF
Sbjct: 219 GAGAGYAMWLAAYPFDIVKSKIQTDGFLS--KATYKNSWQCAKGIYTKAGLRGFYRGF 274
>SPAC4G8.08 |||iron ion transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 271
Score = 42.3 bits (95), Expect = 6e-05
Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 1/88 (1%)
Frame = -1
Query: 522 NCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTARGMLPDPKNTPIVISWAIAQ 343
N IS + +S+GL G YRG+ + V + S++ Y+ ++ L N I + I
Sbjct: 121 NTISTLARSEGLKGFYRGYWMGVAIYLPTTVSWWVCYEESKKYLQKQSNWDISVIAPICS 180
Query: 342 TV-TTVAGIISYPFDTVRRRMMMQSGRA 262
+ T VA IS P D V+ R + + A
Sbjct: 181 ALGTVVATTISTPLDIVKTRYQVATSSA 208
Score = 33.5 bits (73), Expect = 0.027
Identities = 32/135 (23%), Positives = 55/135 (40%), Gaps = 1/135 (0%)
Frame = -1
Query: 504 FKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTARGMLPDPKNTPIVISWAIAQTVTTVA 325
FK+ L YRG +S+ I Y Y A+ ++ T V+
Sbjct: 38 FKTMPLKAYYRGLPISLTLITPATCLYLSTYVEAKRRFKPSVGEGAILYSICGMTAEVVS 97
Query: 324 GIISYPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSAFFKGAFSNV-LRGTG 148
+ P + ++ R + K ++ NTI +T+A++EG F++G + V +
Sbjct: 98 SFVWTPLEVIKARTQISQ---KGSVI--NTI---STLARSEGLKGFYRGYWMGVAIYLPT 149
Query: 147 GAFVLVLYDEIKKVL 103
V Y+E KK L
Sbjct: 150 TVSWWVCYEESKKYL 164
>SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 317
Score = 41.1 bits (92), Expect = 1e-04
Identities = 41/175 (23%), Positives = 66/175 (37%), Gaps = 14/175 (8%)
Frame = -1
Query: 639 GGAAGATXLCFVYPLDFARTRLAADV-GKGDGQREFSGLGNCISKIFK------------ 499
G AGA YPLD ARTRL+ + G + + N K+
Sbjct: 122 GAIAGAASCATTYPLDIARTRLSIETAGLTSRSLAINNVANNSLKVKPLTLWSTLLYIVQ 181
Query: 498 -SDGLIGLYRGFGVSVQGIIIYRASYFGFYDTARGMLPDPKNTPIVISWAIAQTVTTVAG 322
G LY G ++ ++ Y + F ++ + + + +
Sbjct: 182 HEGGYPALYNGLPATLLNVVPYVSICFFTFEFCKQKFFSNADLTAFQKLFLGGFTGIIGQ 241
Query: 321 IISYPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSAFFKGAFSNVLR 157
+++P D +RRR + YKN I KTEG + FF+G SN+L+
Sbjct: 242 TLTFPADVLRRRFQVNRIPGIGHN-YKNIKSAIFHIYKTEGINGFFRGYSSNMLK 295
Score = 38.7 bits (86), Expect = 7e-04
Identities = 23/85 (27%), Positives = 39/85 (45%)
Frame = -1
Query: 639 GGAAGATXLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGV 460
GG G +P D R R + G G + + + I I+K++G+ G +RG+
Sbjct: 233 GGFTGIIGQTLTFPADVLRRRFQVNRIPGIGHN-YKNIKSAIFHIYKTEGINGFFRGYSS 291
Query: 459 SVQGIIIYRASYFGFYDTARGMLPD 385
++ II + + Y+T ML D
Sbjct: 292 NMLKIIPVMSITWYTYETVSKMLHD 316
Score = 37.1 bits (82), Expect = 0.002
Identities = 35/143 (24%), Positives = 61/143 (42%), Gaps = 6/143 (4%)
Frame = -1
Query: 642 SGGAAGATXLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFG 463
SGG A V PL+ R ++ V +E++ L + + KI+ +GLIG +RG G
Sbjct: 26 SGGVAATVSRTAVSPLE--RMKIIFQV---QNNKEYTSLTSTLVKIWNREGLIGFFRGNG 80
Query: 462 VSVQGIIIYRASYFGFYDTARGML------PDPKNTPIVISWAIAQTVTTVAGIISYPFD 301
+ Y A F ++ + + +N ++ AIA + +YP D
Sbjct: 81 TNCLRAFPYGAVQFATFNMLKQRALKNRSHQNLENHERLLFGAIAGAASCAT---TYPLD 137
Query: 300 TVRRRMMMQSGRAKSDILYKNTI 232
R R+ +++ S L N +
Sbjct: 138 IARTRLSIETAGLTSRSLAINNV 160
>SPAC17H9.08 |||mitochondrial coenzyme A
transporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 326
Score = 41.1 bits (92), Expect = 1e-04
Identities = 34/138 (24%), Positives = 55/138 (39%), Gaps = 2/138 (1%)
Frame = -1
Query: 642 SGGAAGATXLCFVYPLDFARTRLAADVGKGDGQR-EFSGLGNCISKIFKSDGLIGLYRGF 466
+GG AG V PLD + + G GL I I+ GL GLY+G
Sbjct: 23 AGGTAGCVAKSVVAPLDRVKILYQTNHASYRGYAYSRHGLYKAIKHIYHVYGLHGLYQGH 82
Query: 465 GVSVQGIIIYRASYFGFYDTARGML-PDPKNTPIVISWAIAQTVTTVAGIISYPFDTVRR 289
++ + Y F Y+ R +L DP++ + T + +YP + +R
Sbjct: 83 TATLYRVFPYAGIKFVAYEQVRRVLIRDPEHETHARRFLSGSLAGTCSVFFTYPLELIRV 142
Query: 288 RMMMQSGRAKSDILYKNT 235
R+ + K+ L + T
Sbjct: 143 RLAYITNTGKNPTLTQVT 160
Score = 40.7 bits (91), Expect = 2e-04
Identities = 49/180 (27%), Positives = 70/180 (38%), Gaps = 25/180 (13%)
Frame = -1
Query: 642 SGGAAGATXLCFVYPLDFARTRLA--ADVGKGDG----------QREFSGLGNCISKIFK 499
SG AG + F YPL+ R RLA + GK +R+F + +
Sbjct: 122 SGSLAGTCSVFFTYPLELIRVRLAYITNTGKNPTLTQVTKDIFHERDFL-CNKKYPGLSR 180
Query: 498 SDGLIGLYRGFGVSVQGIIIYRASYFGFYDTARGM---------LPDPKNTPIVISW--A 352
+ YRGF V++ GI Y F YD A + K+ + +W
Sbjct: 181 LSKICNFYRGFSVTLTGIFPYAGMSFLAYDLATDFFHKQKIDEWVSTKKSDKKLKTWPEL 240
Query: 351 IAQTVTTVAG-IISYPFDTVRRRMMMQSGRA-KSDILYKNTIHCWATIAKTEGTSAFFKG 178
+ V G +SYPF+ RR+M + R KS + K + T K G FF G
Sbjct: 241 LCGAFAGVCGQTVSYPFEVCRRKMQIGGIRKNKSFLRLKQVVQ---TTYKEAGMRGFFVG 297
>SPAC823.10c |||mitochondrial carrier with solute carrier
repeats|Schizosaccharomyces pombe|chr 1|||Manual
Length = 296
Score = 40.7 bits (91), Expect = 2e-04
Identities = 35/140 (25%), Positives = 62/140 (44%), Gaps = 13/140 (9%)
Frame = -1
Query: 537 FSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTARGMLP---DPKNTPI 367
++ + + I I+K +G+ G +RGFGV+ + Y FY+ ++ L D +
Sbjct: 141 YTTIYSSIRDIWKKEGISGFFRGFGVTALRDAPHAGLYVYFYELSKQNLHKLFDRFSPSS 200
Query: 366 VISWAI--AQTVTTVAGIIS--------YPFDTVRRRMMMQSGRAKSDILYKNTIHCWAT 217
+ + V ++G+IS PFD ++ R+ ++ +YKN +H
Sbjct: 201 SVQGTVPHRNIVNVMSGLISGATATAITNPFDMLKTRVQLEPH------IYKNFLHSAKL 254
Query: 216 IAKTEGTSAFFKGAFSNVLR 157
+ EG F G F VLR
Sbjct: 255 VYANEGFRGFLDGFFLRVLR 274
>SPBC27B12.09c |||FAD transporter|Schizosaccharomyces pombe|chr
2|||Manual
Length = 277
Score = 40.3 bits (90), Expect = 2e-04
Identities = 41/180 (22%), Positives = 77/180 (42%), Gaps = 3/180 (1%)
Frame = -1
Query: 642 SGGAAGATXLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFG 463
+G AAG ++PLD A+ ++ A + + D + F S I + + LY G
Sbjct: 6 AGLAAGTASTLIMHPLDLAKIQMQASMNQ-DSKSLFQVFK---SNIGSNGSIRSLYHGLS 61
Query: 462 VSVQGIIIYRASYFGFYDTARG--MLPDPKNTPIVISWAIAQTVTTVAGIISYPFDTVRR 289
++V G +YF YD ++ M P N + ++ QT+ + +G +
Sbjct: 62 INVLGSAASWGAYFCIYDFSKRVVMSMTPFNNGEI---SVLQTLCS-SGFAGCIVAALTN 117
Query: 288 RMMMQSGRAKSD-ILYKNTIHCWATIAKTEGTSAFFKGAFSNVLRGTGGAFVLVLYDEIK 112
+ + R S + Y N + + K EG + G ++L + GA + Y+++K
Sbjct: 118 PIWVVKSRILSKRVNYTNPFFGFYDLIKNEGLRGCYAGFAPSLLGVSQGALQFMAYEKLK 177
Score = 30.7 bits (66), Expect = 0.19
Identities = 27/118 (22%), Positives = 50/118 (42%), Gaps = 1/118 (0%)
Frame = -1
Query: 507 IFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTARGMLPDPKNTPIVISWAIAQTVTTV 328
+ K++GL G Y GF S+ G + A F Y+ + + P + + + V
Sbjct: 143 LIKNEGLRGCYAGFAPSLLG-VSQGALQFMAYEKLKLW---KQRRPTSLDYIFMSAASKV 198
Query: 327 -AGIISYPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSAFFKGAFSNVLR 157
A + YP +R R+ + +S + + W + +G F+KG ++LR
Sbjct: 199 FAAVNMYPLLVIRTRLQVMRSPHRS--IMNLVLQTW----RLQGILGFYKGFLPHLLR 250
>SPBC1604.04 |||thiamine pyrophosphate
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 314
Score = 36.7 bits (81), Expect = 0.003
Identities = 38/168 (22%), Positives = 67/168 (39%), Gaps = 1/168 (0%)
Frame = -1
Query: 639 GGAAGATXLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGV 460
G +AG YPLD RT+ A+ + + KI+ G+ G + G
Sbjct: 111 GTSAGIFATLTSYPLDTMRTKFAS-------YAKTPHMLPATKKIYAEAGIKGFFPGLKF 163
Query: 459 SVQGIIIYRASYFGFYDTARGMLPDPKNTPIVISWAIAQTVTTVAG-IISYPFDTVRRRM 283
SV I Y +F FY + +L P + +S ++ + I +P DTV + +
Sbjct: 164 SVIQIGPYAGCFFMFYRASEAVL-SPLG--LALSSTLSGVIAGAGSKAIMFPVDTVVKTL 220
Query: 282 MMQSGRAKSDILYKNTIHCWATIAKTEGTSAFFKGAFSNVLRGTGGAF 139
YK+ C+ +I + G ++G ++L+ G +
Sbjct: 221 QTFPSN------YKSFKDCFLSIYRNSGIKGLYRGLSVSMLKVAPGRY 262
Score = 28.3 bits (60), Expect = 1.0
Identities = 17/83 (20%), Positives = 37/83 (44%)
Frame = -1
Query: 534 SGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTARGMLPDPKNTPIVISW 355
S L + + +G+ L+RG V+ ++Y A+ F + + + + +++
Sbjct: 49 SSLRPVFKETVQKEGVRALWRGNVVAELLYLVYGAAEFVAFSKLKHLTENLAMNDHAVNF 108
Query: 354 AIAQTVTTVAGIISYPFDTVRRR 286
+ A + SYP DT+R +
Sbjct: 109 LCGTSAGIFATLTSYPLDTMRTK 131
>SPBC83.13 |||mitochondrial tricarboxylic acid
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 293
Score = 35.9 bits (79), Expect = 0.005
Identities = 29/82 (35%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Frame = -1
Query: 633 AAGATXLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSV 454
+AGA C+ PL+ AR + + + KG Q G+ I I+K++G+ GLYRG V
Sbjct: 214 SAGALS-CWNQPLEVARVEMQS-LTKGI-QHSSPGIMQTIMSIYKNNGIKGLYRG-AVPR 269
Query: 453 QGIIIYRASYFGFY-DTARGML 391
G+ Y+ F D RG L
Sbjct: 270 MGLGAYQTFVMVFLADCVRGYL 291
>SPBC29A3.11c |||mitochondrial carboxylic acid
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 297
Score = 31.5 bits (68), Expect = 0.11
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = -1
Query: 537 FSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTAR 400
F + +C K++GL GLYRG + + + R+ F YD+ +
Sbjct: 50 FPTIRSCFQNAVKNEGLKGLYRGLTLPLISATLSRSVSFTVYDSLK 95
>SPBC1703.13c |||inorganic phosphate transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 311
Score = 31.1 bits (67), Expect = 0.14
Identities = 23/88 (26%), Positives = 38/88 (43%)
Frame = -1
Query: 645 ASGGAAGATXLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGF 466
A G AG +P D ++L ++ G+G G ++I+K G GL+ G
Sbjct: 226 AGGYMAGVLCAIISHPADVMVSKLNSNKKAGEGA------GAAAARIYKEIGFSGLWNGL 279
Query: 465 GVSVQGIIIYRASYFGFYDTARGMLPDP 382
GV + I + + YD+ + M P
Sbjct: 280 GVRIVMIGTLTGAQWLIYDSFKIMCGFP 307
Score = 26.6 bits (56), Expect = 3.1
Identities = 25/116 (21%), Positives = 45/116 (38%), Gaps = 6/116 (5%)
Frame = -1
Query: 507 IFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTAR---GMLPDPKNT---PIVISWAIA 346
I +GL GLY G ++ G + +GFY+ + L + I A +
Sbjct: 68 ILSKEGLRGLYTGGMPTLIGYSLQGCGKYGFYELFKHKYSTLVGAQKAHEYRTSIYLAAS 127
Query: 345 QTVTTVAGIISYPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSAFFKG 178
+ +A I+ P + ++ R+ + R T W+ I EG ++G
Sbjct: 128 ASAELLADIMLCPMEAIKVRVQTSNPR-----FANTTREAWSKIVTNEGFGTLYRG 178
>SPBC25B2.05 |mis3||rRNA processing protein Mis3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 327
Score = 28.3 bits (60), Expect = 1.0
Identities = 23/75 (30%), Positives = 32/75 (42%), Gaps = 4/75 (5%)
Frame = +2
Query: 428 EAR*MMIPCTDTPKPLYRPIRPSDLKILLMQFPRPENSRWPSPLPT----SAARRVRAKS 595
E R ++ C P+Y I+ +K L + P N W LP + ARR AK
Sbjct: 195 EVRRIVEDCMHNIHPIYH-IKELMIKRELAKDPTLANESWDRFLPQFKKRNVARRKPAKI 253
Query: 596 RGYTKHRXVAPAAPP 640
R ++ PA PP
Sbjct: 254 RETKEYTPFPPAQPP 268
>SPBC1271.11 |||tricarboxylate transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 258
Score = 27.5 bits (58), Expect = 1.8
Identities = 11/42 (26%), Positives = 22/42 (52%)
Frame = -1
Query: 516 ISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTARGML 391
+ +I+K +G+ G +G G+ V + + Y G Y+ + L
Sbjct: 206 VRRIYKENGIFGFEKGLGLRVFASSLGLSIYLGTYEHVKSHL 247
>SPCC18B5.05c |||phosphomethylpyrimidine kinase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 327
Score = 25.8 bits (54), Expect = 5.3
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = -1
Query: 399 GMLPDPKNTPIVISWAIAQTVTTV 328
GMLPDPK+ P++ +T V
Sbjct: 89 GMLPDPKSIPVISQALTKYKITDV 112
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 25.8 bits (54), Expect = 5.3
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +2
Query: 128 KTSTKAPPVPLRTLEKAPL 184
K S+KAPPVPL + + P+
Sbjct: 1016 KLSSKAPPVPLPSADAPPI 1034
>SPAC2F3.01 ||SPAC323.09|mannosyltransferase complex subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 319
Score = 25.8 bits (54), Expect = 5.3
Identities = 12/48 (25%), Positives = 22/48 (45%)
Frame = -1
Query: 465 GVSVQGIIIYRASYFGFYDTARGMLPDPKNTPIVISWAIAQTVTTVAG 322
G+ + G+I+ + Y+T R M+P P +S + T+ G
Sbjct: 12 GIPICGVILLILWGYSLYNTLRFMVPGKATEPFTLSLSDVSDDTSAPG 59
>SPAC12B10.09 |||S-adenosylmethionine transporter
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 345
Score = 25.4 bits (53), Expect = 7.1
Identities = 21/78 (26%), Positives = 30/78 (38%)
Frame = -1
Query: 642 SGGAAGATXLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFG 463
SG AG P D +TR+ Q+ S + I I +G + LY+G
Sbjct: 264 SGSIAGGIAAALTTPFDVVKTRIMTS------QQRLSYVFT-IKSIVAHEGFLALYKGIV 316
Query: 462 VSVQGIIIYRASYFGFYD 409
V + A + G YD
Sbjct: 317 PRVLWLSGGGAIFLGCYD 334
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.317 0.135 0.399
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,153,422
Number of Sequences: 5004
Number of extensions: 39987
Number of successful extensions: 198
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 150
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 182
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 289756512
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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