Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt10d20
(645 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY568009-1|AAS73299.1| 300|Apis mellifera ADP/ATP translocase p... 337 6e-95
AY332626-1|AAQ24500.1| 300|Apis mellifera ADP/ATP translocase p... 337 6e-95
EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase p... 23 3.3
>AY568009-1|AAS73299.1| 300|Apis mellifera ADP/ATP translocase
protein.
Length = 300
Score = 337 bits (828), Expect = 6e-95
Identities = 154/181 (85%), Positives = 169/181 (93%)
Frame = -1
Query: 645 ASGGAAGATXLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGF 466
ASGGAAGAT LCFVYPLDFARTRLAADVGK G+REF+GLGNC++KIFK+DG+ GLYRGF
Sbjct: 120 ASGGAAGATSLCFVYPLDFARTRLAADVGKAGGEREFTGLGNCLTKIFKADGITGLYRGF 179
Query: 465 GVSVQGIIIYRASYFGFYDTARGMLPDPKNTPIVISWAIAQTVTTVAGIISYPFDTVRRR 286
GVSVQGIIIYRA+YFGFYDTARGMLPDPK TP +ISW IAQ VTTVAGI+SYPFDTVRRR
Sbjct: 180 GVSVQGIIIYRAAYFGFYDTARGMLPDPKKTPFLISWGIAQVVTTVAGIVSYPFDTVRRR 239
Query: 285 MMMQSGRAKSDILYKNTIHCWATIAKTEGTSAFFKGAFSNVLRGTGGAFVLVLYDEIKKV 106
MMMQSGRAKS+ILYK+T+HCWATI KTEG +AFFKGAFSN+LRGTGGA VLVLYDEIK +
Sbjct: 240 MMMQSGRAKSEILYKSTLHCWATIYKTEGGNAFFKGAFSNILRGTGGALVLVLYDEIKNL 299
Query: 105 L 103
L
Sbjct: 300 L 300
Score = 40.7 bits (91), Expect = 1e-05
Identities = 38/163 (23%), Positives = 66/163 (40%), Gaps = 8/163 (4%)
Frame = -1
Query: 642 SGGAAGATXLCFVYPLDFARTRLAAD-VGKGDGQRE-FSGLGNCISKIFKSDGLIGLYRG 469
+GG A A V P++ + L + K + + + G+ +C +I K G + +RG
Sbjct: 16 AGGVAAAISKTTVAPIERVKLLLQVQHISKQISEEQRYKGMIDCFVRIPKEQGFLSYWRG 75
Query: 468 FGVSVQGIIIYRASYFGFYDTARGMLPD--PKNTPIVISWAIAQTVTTVAGIIS----YP 307
+V +A F F D + + KNT + + AG S YP
Sbjct: 76 NLANVIRYFPTQALNFAFKDKYKQVFLGGVDKNTQFLRYFVGNLASGGAAGATSLCFVYP 135
Query: 306 FDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSAFFKG 178
D R R+ G+A + + +C I K +G + ++G
Sbjct: 136 LDFARTRLAADVGKAGGEREFTGLGNCLTKIFKADGITGLYRG 178
Score = 31.9 bits (69), Expect = 0.005
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Frame = -1
Query: 354 AIAQTVTTVAGIISYPFDTVRRRMMMQ--SGRAKSDILYKNTIHCWATIAKTEGTSAFFK 181
A A + TTVA P + V+ + +Q S + + YK I C+ I K +G ++++
Sbjct: 20 AAAISKTTVA-----PIERVKLLLQVQHISKQISEEQRYKGMIDCFVRIPKEQGFLSYWR 74
Query: 180 GAFSNVLR 157
G +NV+R
Sbjct: 75 GNLANVIR 82
>AY332626-1|AAQ24500.1| 300|Apis mellifera ADP/ATP translocase
protein.
Length = 300
Score = 337 bits (828), Expect = 6e-95
Identities = 154/181 (85%), Positives = 169/181 (93%)
Frame = -1
Query: 645 ASGGAAGATXLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGF 466
ASGGAAGAT LCFVYPLDFARTRLAADVGK G+REF+GLGNC++KIFK+DG+ GLYRGF
Sbjct: 120 ASGGAAGATSLCFVYPLDFARTRLAADVGKAGGEREFTGLGNCLTKIFKADGITGLYRGF 179
Query: 465 GVSVQGIIIYRASYFGFYDTARGMLPDPKNTPIVISWAIAQTVTTVAGIISYPFDTVRRR 286
GVSVQGIIIYRA+YFGFYDTARGMLPDPK TP +ISW IAQ VTTVAGI+SYPFDTVRRR
Sbjct: 180 GVSVQGIIIYRAAYFGFYDTARGMLPDPKKTPFLISWGIAQVVTTVAGIVSYPFDTVRRR 239
Query: 285 MMMQSGRAKSDILYKNTIHCWATIAKTEGTSAFFKGAFSNVLRGTGGAFVLVLYDEIKKV 106
MMMQSGRAKS+ILYK+T+HCWATI KTEG +AFFKGAFSN+LRGTGGA VLVLYDEIK +
Sbjct: 240 MMMQSGRAKSEILYKSTLHCWATIYKTEGGNAFFKGAFSNILRGTGGALVLVLYDEIKNL 299
Query: 105 L 103
L
Sbjct: 300 L 300
Score = 40.7 bits (91), Expect = 1e-05
Identities = 38/163 (23%), Positives = 66/163 (40%), Gaps = 8/163 (4%)
Frame = -1
Query: 642 SGGAAGATXLCFVYPLDFARTRLAAD-VGKGDGQRE-FSGLGNCISKIFKSDGLIGLYRG 469
+GG A A V P++ + L + K + + + G+ +C +I K G + +RG
Sbjct: 16 AGGVAAAISKTTVAPIERVKLLLQVQHISKQISEEQRYKGMIDCFVRIPKEQGFLSYWRG 75
Query: 468 FGVSVQGIIIYRASYFGFYDTARGMLPD--PKNTPIVISWAIAQTVTTVAGIIS----YP 307
+V +A F F D + + KNT + + AG S YP
Sbjct: 76 NLANVIRYFPTQALNFAFKDKYKQVFLGGVDKNTQFLRYFVGNLASGGAAGATSLCFVYP 135
Query: 306 FDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSAFFKG 178
D R R+ G+A + + +C I K +G + ++G
Sbjct: 136 LDFARTRLAADVGKAGGEREFTGLGNCLTKIFKADGITGLYRG 178
Score = 31.9 bits (69), Expect = 0.005
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Frame = -1
Query: 354 AIAQTVTTVAGIISYPFDTVRRRMMMQ--SGRAKSDILYKNTIHCWATIAKTEGTSAFFK 181
A A + TTVA P + V+ + +Q S + + YK I C+ I K +G ++++
Sbjct: 20 AAAISKTTVA-----PIERVKLLLQVQHISKQISEEQRYKGMIDCFVRIPKEQGFLSYWR 74
Query: 180 GAFSNVLR 157
G +NV+R
Sbjct: 75 GNLANVIR 82
>EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase
protein.
Length = 620
Score = 22.6 bits (46), Expect = 3.3
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = +2
Query: 113 LISSYKTSTKAPPVPLRTLEKAPL 184
L++++KT T+ P + LEK P+
Sbjct: 134 LVNAFKTLTQEPKNTNKFLEKGPV 157
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.317 0.135 0.399
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,101
Number of Sequences: 438
Number of extensions: 3041
Number of successful extensions: 16
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19438227
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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