Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt10d15
(729 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY058243-1|AAL13472.1| 470|Drosophila melanogaster GH01077p pro... 407 e-113
AE014297-1916|AAN13622.1| 470|Drosophila melanogaster CG3731-PB... 407 e-113
AE014297-1915|AAF55110.2| 470|Drosophila melanogaster CG3731-PA... 407 e-113
AY058323-1|AAL13552.1| 556|Drosophila melanogaster GH09295p pro... 91 1e-18
AE013599-541|AAF59168.1| 556|Drosophila melanogaster CG8728-PA ... 91 1e-18
AY089228-1|AAL89966.1| 440|Drosophila melanogaster AT02348p pro... 47 2e-05
AE014296-2761|AAF49444.1| 440|Drosophila melanogaster CG4169-PA... 47 2e-05
AF151708-1|AAB59182.1| 1156|Drosophila melanogaster adducin-like... 30 3.7
AY060935-1|AAL28483.1| 360|Drosophila melanogaster GM07741p pro... 29 4.9
AF220216-1|AAF33781.1| 394|Drosophila melanogaster galanin rece... 29 4.9
AF163775-1|AAF05299.1| 394|Drosophila melanogaster allatostatin... 29 4.9
AF149795-1|AAF03218.1| 481|Drosophila melanogaster Drep2 protein. 29 4.9
AE014298-543|AAG22404.2| 384|Drosophila melanogaster CG2872-PC,... 29 4.9
AE014298-542|AAF45884.3| 394|Drosophila melanogaster CG2872-PB,... 29 4.9
X03636-1|CAA27285.1| 1127|Drosophila melanogaster per protein pr... 29 6.5
M30114-3|AAA28753.1| 1176|Drosophila melanogaster biological clo... 29 6.5
M30114-1|AAA28754.1| 1218|Drosophila melanogaster biological clo... 29 6.5
D00009-1|BAA00007.1| 570|Drosophila melanogaster proteoglycan p... 29 6.5
AL024485-7|CAA19677.1| 1156|Drosophila melanogaster EG:155E2.4,F... 29 6.5
AL024485-4|CAA19678.1| 1212|Drosophila melanogaster EG:155E2.4,F... 29 6.5
AF033029-1|AAB87476.1| 1224|Drosophila melanogaster period clock... 29 6.5
AE014298-440|AAF45804.1| 1218|Drosophila melanogaster CG2647-PA ... 29 6.5
BT024202-1|ABC86264.1| 394|Drosophila melanogaster RE48774p pro... 29 8.6
>AY058243-1|AAL13472.1| 470|Drosophila melanogaster GH01077p
protein.
Length = 470
Score = 407 bits (1001), Expect = e-113
Identities = 181/235 (77%), Positives = 204/235 (86%)
Frame = -3
Query: 727 LVDLASKHFSGLKNSACDVELTPCRYTGSEIRVRDDSMPLAHVAIAVEGAGWTDADNIPL 548
LV LA GL+ S E+TPCR+TGSE+RVRDDS+PLAHVAIAVEG GWTD DNIPL
Sbjct: 235 LVKLACSSLGGLEASVLPAEVTPCRFTGSEVRVRDDSLPLAHVAIAVEGCGWTDQDNIPL 294
Query: 547 MVANTLIGAWDRSQGGGANNASYLARAASVGNLCHSFQSFNTCYKDTGLWGIYFVAESLQ 368
MVANTL+GAWDRSQGGGANNAS LARA++ NLCHSFQSFNTCYKDTGLWGIYFV + LQ
Sbjct: 295 MVANTLVGAWDRSQGGGANNASNLARASAEDNLCHSFQSFNTCYKDTGLWGIYFVCDPLQ 354
Query: 367 LDDMLYNIQKEWMKLCTSVTEGEVERAKNLLKTNMLLQLDGTTPVCEDIGRQMLCYNRRI 188
+DML+N+Q EWM+LCT VTE EVERAKNLLKTNMLLQLDGTTP+CEDIGRQ+LCYNRRI
Sbjct: 355 CEDMLFNVQTEWMRLCTMVTEAEVERAKNLLKTNMLLQLDGTTPICEDIGRQILCYNRRI 414
Query: 187 PIHELDARIESVTVQNVRDVCYKYLFDRCPAVAAVGPTEGLPDYTRIRGGMYWVR 23
P+HEL+ RI++V+V NVRDV KY++DRCPAVAAVGP E LPDY RIR MYW+R
Sbjct: 415 PLHELEQRIDAVSVGNVRDVAMKYIYDRCPAVAAVGPVENLPDYNRIRSSMYWLR 469
>AE014297-1916|AAN13622.1| 470|Drosophila melanogaster CG3731-PB,
isoform B protein.
Length = 470
Score = 407 bits (1001), Expect = e-113
Identities = 181/235 (77%), Positives = 204/235 (86%)
Frame = -3
Query: 727 LVDLASKHFSGLKNSACDVELTPCRYTGSEIRVRDDSMPLAHVAIAVEGAGWTDADNIPL 548
LV LA GL+ S E+TPCR+TGSE+RVRDDS+PLAHVAIAVEG GWTD DNIPL
Sbjct: 235 LVKLACSSLGGLEASVLPAEVTPCRFTGSEVRVRDDSLPLAHVAIAVEGCGWTDQDNIPL 294
Query: 547 MVANTLIGAWDRSQGGGANNASYLARAASVGNLCHSFQSFNTCYKDTGLWGIYFVAESLQ 368
MVANTL+GAWDRSQGGGANNAS LARA++ NLCHSFQSFNTCYKDTGLWGIYFV + LQ
Sbjct: 295 MVANTLVGAWDRSQGGGANNASNLARASAEDNLCHSFQSFNTCYKDTGLWGIYFVCDPLQ 354
Query: 367 LDDMLYNIQKEWMKLCTSVTEGEVERAKNLLKTNMLLQLDGTTPVCEDIGRQMLCYNRRI 188
+DML+N+Q EWM+LCT VTE EVERAKNLLKTNMLLQLDGTTP+CEDIGRQ+LCYNRRI
Sbjct: 355 CEDMLFNVQTEWMRLCTMVTEAEVERAKNLLKTNMLLQLDGTTPICEDIGRQILCYNRRI 414
Query: 187 PIHELDARIESVTVQNVRDVCYKYLFDRCPAVAAVGPTEGLPDYTRIRGGMYWVR 23
P+HEL+ RI++V+V NVRDV KY++DRCPAVAAVGP E LPDY RIR MYW+R
Sbjct: 415 PLHELEQRIDAVSVGNVRDVAMKYIYDRCPAVAAVGPVENLPDYNRIRSSMYWLR 469
>AE014297-1915|AAF55110.2| 470|Drosophila melanogaster CG3731-PA,
isoform A protein.
Length = 470
Score = 407 bits (1001), Expect = e-113
Identities = 181/235 (77%), Positives = 204/235 (86%)
Frame = -3
Query: 727 LVDLASKHFSGLKNSACDVELTPCRYTGSEIRVRDDSMPLAHVAIAVEGAGWTDADNIPL 548
LV LA GL+ S E+TPCR+TGSE+RVRDDS+PLAHVAIAVEG GWTD DNIPL
Sbjct: 235 LVKLACSSLGGLEASVLPAEVTPCRFTGSEVRVRDDSLPLAHVAIAVEGCGWTDQDNIPL 294
Query: 547 MVANTLIGAWDRSQGGGANNASYLARAASVGNLCHSFQSFNTCYKDTGLWGIYFVAESLQ 368
MVANTL+GAWDRSQGGGANNAS LARA++ NLCHSFQSFNTCYKDTGLWGIYFV + LQ
Sbjct: 295 MVANTLVGAWDRSQGGGANNASNLARASAEDNLCHSFQSFNTCYKDTGLWGIYFVCDPLQ 354
Query: 367 LDDMLYNIQKEWMKLCTSVTEGEVERAKNLLKTNMLLQLDGTTPVCEDIGRQMLCYNRRI 188
+DML+N+Q EWM+LCT VTE EVERAKNLLKTNMLLQLDGTTP+CEDIGRQ+LCYNRRI
Sbjct: 355 CEDMLFNVQTEWMRLCTMVTEAEVERAKNLLKTNMLLQLDGTTPICEDIGRQILCYNRRI 414
Query: 187 PIHELDARIESVTVQNVRDVCYKYLFDRCPAVAAVGPTEGLPDYTRIRGGMYWVR 23
P+HEL+ RI++V+V NVRDV KY++DRCPAVAAVGP E LPDY RIR MYW+R
Sbjct: 415 PLHELEQRIDAVSVGNVRDVAMKYIYDRCPAVAAVGPVENLPDYNRIRSSMYWLR 469
>AY058323-1|AAL13552.1| 556|Drosophila melanogaster GH09295p
protein.
Length = 556
Score = 91.1 bits (216), Expect = 1e-18
Identities = 59/191 (30%), Positives = 91/191 (47%), Gaps = 3/191 (1%)
Frame = -3
Query: 610 LAHVAIAVEGAGWTDADNIPLMVANTLIGAWDRSQGGGANNASYLARAASVGNLCH---S 440
LAHV + EG D D +PL V N ++G GG Y V N H S
Sbjct: 347 LAHVILGFEGCSHQDKDFVPLCVLNIMMGGGGSFSAGGPGKGMYSRLYTKVLNRYHWMYS 406
Query: 439 FQSFNTCYKDTGLWGIYFVAESLQLDDMLYNIQKEWMKLCTSVTEGEVERAKNLLKTNML 260
++N Y D GL+ ++ A ++DM+ + +E M + E+ R+K L++ +L
Sbjct: 407 ATAYNHAYGDCGLFCVHGSAPPQHMNDMVEVLTREMMGMAAEPGREELMRSKIQLQSMLL 466
Query: 259 LQLDGTTPVCEDIGRQMLCYNRRIPIHELDARIESVTVQNVRDVCYKYLFDRCPAVAAVG 80
+ L+ V ED+GRQ+L +R IESVT +++ V + L P+VAA G
Sbjct: 467 MNLESRPVVFEDVGRQVLVTGQRKRPQHFIKEIESVTAADIQRVAQR-LLSSPPSVAARG 525
Query: 79 PTEGLPDYTRI 47
LP+ + I
Sbjct: 526 DIHNLPEMSHI 536
>AE013599-541|AAF59168.1| 556|Drosophila melanogaster CG8728-PA
protein.
Length = 556
Score = 91.1 bits (216), Expect = 1e-18
Identities = 59/191 (30%), Positives = 91/191 (47%), Gaps = 3/191 (1%)
Frame = -3
Query: 610 LAHVAIAVEGAGWTDADNIPLMVANTLIGAWDRSQGGGANNASYLARAASVGNLCH---S 440
LAHV + EG D D +PL V N ++G GG Y V N H S
Sbjct: 347 LAHVILGFEGCSHQDKDFVPLCVLNIMMGGGGSFSAGGPGKGMYSRLYTKVLNRYHWMYS 406
Query: 439 FQSFNTCYKDTGLWGIYFVAESLQLDDMLYNIQKEWMKLCTSVTEGEVERAKNLLKTNML 260
++N Y D GL+ ++ A ++DM+ + +E M + E+ R+K L++ +L
Sbjct: 407 ATAYNHAYGDCGLFCVHGSAPPQHMNDMVEVLTREMMGMAAEPGREELMRSKIQLQSMLL 466
Query: 259 LQLDGTTPVCEDIGRQMLCYNRRIPIHELDARIESVTVQNVRDVCYKYLFDRCPAVAAVG 80
+ L+ V ED+GRQ+L +R IESVT +++ V + L P+VAA G
Sbjct: 467 MNLESRPVVFEDVGRQVLVTGQRKRPQHFIKEIESVTAADIQRVAQR-LLSSPPSVAARG 525
Query: 79 PTEGLPDYTRI 47
LP+ + I
Sbjct: 526 DIHNLPEMSHI 536
>AY089228-1|AAL89966.1| 440|Drosophila melanogaster AT02348p
protein.
Length = 440
Score = 47.2 bits (107), Expect = 2e-05
Identities = 46/197 (23%), Positives = 87/197 (44%), Gaps = 2/197 (1%)
Frame = -3
Query: 646 GSEIRVRDDSMPLAHVAIAVEGAGWTD-ADNIPLMVANTLIGAWDRSQGGGANNASYLAR 470
G + R +D S A VA+A +GA ++ + + + +GA ++ G +A
Sbjct: 244 GGDAR-KDTSGHRAVVAVAGQGAAASNHKEALAFAILEQALGAKAATKRG--TSAGLFGE 300
Query: 469 AAS-VGNLCHSFQSFNTCYKDTGLWGIYFVAESLQLDDMLYNIQKEWMKLCTSVTEGEVE 293
A + G + S ++ N Y D GL+G A+S + + + + SV++ +V
Sbjct: 301 AVNCAGGVGASVKAVNASYSDAGLFGFVVSADSKDIGKTVEFLVRGLKS--ASVSDKDVA 358
Query: 292 RAKNLLKTNMLLQLDGTTPVCEDIGRQMLCYNRRIPIHELDARIESVTVQNVRDVCYKYL 113
R K LLK ++ + + ++IGRQ + L I+ ++ V++ K
Sbjct: 359 RGKALLKARIISRYSSDGGLIKEIGRQAALTRNVLEADALLGAIDGISQSQVQEAAKKVG 418
Query: 112 FDRCPAVAAVGPTEGLP 62
+ AV A+G +P
Sbjct: 419 SSKL-AVGAIGHLANVP 434
>AE014296-2761|AAF49444.1| 440|Drosophila melanogaster CG4169-PA
protein.
Length = 440
Score = 47.2 bits (107), Expect = 2e-05
Identities = 46/197 (23%), Positives = 87/197 (44%), Gaps = 2/197 (1%)
Frame = -3
Query: 646 GSEIRVRDDSMPLAHVAIAVEGAGWTD-ADNIPLMVANTLIGAWDRSQGGGANNASYLAR 470
G + R +D S A VA+A +GA ++ + + + +GA ++ G +A
Sbjct: 244 GGDAR-KDTSGHRAVVAVAGQGAAASNHKEALAFAILEQALGAKAATKRG--TSAGLFGE 300
Query: 469 AAS-VGNLCHSFQSFNTCYKDTGLWGIYFVAESLQLDDMLYNIQKEWMKLCTSVTEGEVE 293
A + G + S ++ N Y D GL+G A+S + + + + SV++ +V
Sbjct: 301 AVNCAGGVGASVKAVNASYSDAGLFGFVVSADSKDIGKTVEFLVRGLKS--ASVSDKDVA 358
Query: 292 RAKNLLKTNMLLQLDGTTPVCEDIGRQMLCYNRRIPIHELDARIESVTVQNVRDVCYKYL 113
R K LLK ++ + + ++IGRQ + L I+ ++ V++ K
Sbjct: 359 RGKALLKARIISRYSSDGGLIKEIGRQAALTRNVLEADALLGAIDGISQSQVQEAAKKVG 418
Query: 112 FDRCPAVAAVGPTEGLP 62
+ AV A+G +P
Sbjct: 419 SSKL-AVGAIGHLANVP 434
>AF151708-1|AAB59182.1| 1156|Drosophila melanogaster adducin-like
protein N4 isoform protein.
Length = 1156
Score = 29.9 bits (64), Expect = 3.7
Identities = 20/76 (26%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Frame = -3
Query: 496 ANNASYLARAASVGNLCHSFQSFNTCYKDT--GLWGIYFVAESLQLDDMLYNIQKEWMKL 323
A+++S + R+ S LCH++ C T AE L+D+L +++KE +L
Sbjct: 1064 ASSSSMVHRSNSAPELCHTYSYVAVCDLSTKQDQASPQLPAEGEPLNDILSSLEKELERL 1123
Query: 322 CTSVTEGEVERAKNLL 275
SV + K ++
Sbjct: 1124 LNSVVTAHMLHNKAII 1139
>AY060935-1|AAL28483.1| 360|Drosophila melanogaster GM07741p
protein.
Length = 360
Score = 29.5 bits (63), Expect = 4.9
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = -3
Query: 535 TLIGAWDRSQGGGANNASYLARAASVGNLCHSFQSFN 425
T++ WD+ QGGG+ VG++C S N
Sbjct: 8 TVVLHWDQRQGGGSGGGGGGGAGGGVGSMCSGLGSSN 44
>AF220216-1|AAF33781.1| 394|Drosophila melanogaster galanin
receptor protein.
Length = 394
Score = 29.5 bits (63), Expect = 4.9
Identities = 21/73 (28%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Frame = -3
Query: 559 NIPLMVANTLIGAWDRSQGGGANNASYLARAASVGNLCHSFQSFNTCYKD-TGLWGIYFV 383
++ L++A TLI +W ++ G N S ++ + S GN ++F S +T + D + +
Sbjct: 6 SLALLLA-TLISSWPKASWGATGNGSIISVSNSSGN-NYAFTSEHTDHSDHNANDSMEYD 63
Query: 382 AESLQLDDMLYNI 344
AES+ L+ ++ I
Sbjct: 64 AESVALERIVSTI 76
>AF163775-1|AAF05299.1| 394|Drosophila melanogaster allatostatin
receptor protein.
Length = 394
Score = 29.5 bits (63), Expect = 4.9
Identities = 21/73 (28%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Frame = -3
Query: 559 NIPLMVANTLIGAWDRSQGGGANNASYLARAASVGNLCHSFQSFNTCYKD-TGLWGIYFV 383
++ L++A TLI +W ++ G N S ++ + S GN ++F S +T + D + +
Sbjct: 6 SLALLLA-TLISSWPKASWGATGNGSIISVSNSSGN-NYAFTSEHTDHSDHNANDSMEYD 63
Query: 382 AESLQLDDMLYNI 344
AES+ L+ ++ I
Sbjct: 64 AESVALERIVSTI 76
>AF149795-1|AAF03218.1| 481|Drosophila melanogaster Drep2 protein.
Length = 481
Score = 29.5 bits (63), Expect = 4.9
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = -3
Query: 535 TLIGAWDRSQGGGANNASYLARAASVGNLCHSFQSFN 425
T++ WD+ QGGG+ VG++C S N
Sbjct: 129 TVVLHWDQRQGGGSGGGESGGAGGGVGSMCSRLGSSN 165
>AE014298-543|AAG22404.2| 384|Drosophila melanogaster CG2872-PC,
isoform C protein.
Length = 384
Score = 29.5 bits (63), Expect = 4.9
Identities = 21/73 (28%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Frame = -3
Query: 559 NIPLMVANTLIGAWDRSQGGGANNASYLARAASVGNLCHSFQSFNTCYKD-TGLWGIYFV 383
++ L++A TLI +W ++ G N S ++ + S GN ++F S +T + D + +
Sbjct: 6 SLALLLA-TLISSWPKASWGATGNGSIISVSNSSGN-NYAFTSEHTDHSDHNANDSMEYD 63
Query: 382 AESLQLDDMLYNI 344
AES+ L+ ++ I
Sbjct: 64 AESVALERIVSTI 76
>AE014298-542|AAF45884.3| 394|Drosophila melanogaster CG2872-PB,
isoform B protein.
Length = 394
Score = 29.5 bits (63), Expect = 4.9
Identities = 21/73 (28%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Frame = -3
Query: 559 NIPLMVANTLIGAWDRSQGGGANNASYLARAASVGNLCHSFQSFNTCYKD-TGLWGIYFV 383
++ L++A TLI +W ++ G N S ++ + S GN ++F S +T + D + +
Sbjct: 6 SLALLLA-TLISSWPKASWGATGNGSIISVSNSSGN-NYAFTSEHTDHSDHNANDSMEYD 63
Query: 382 AESLQLDDMLYNI 344
AES+ L+ ++ I
Sbjct: 64 AESVALERIVSTI 76
>X03636-1|CAA27285.1| 1127|Drosophila melanogaster per protein
protein.
Length = 1127
Score = 29.1 bits (62), Expect = 6.5
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = -3
Query: 505 GGGANNASYLARAASVGNLCHSFQSFNTCYKDTGLW 398
GGGA A+ ++SVG+ S+ TC ++ LW
Sbjct: 806 GGGAGAAAAAGASSSVGSSTPGPSSYPTCTQNINLW 841
>M30114-3|AAA28753.1| 1176|Drosophila melanogaster biological clock
protein C protein.
Length = 1176
Score = 29.1 bits (62), Expect = 6.5
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = -3
Query: 505 GGGANNASYLARAASVGNLCHSFQSFNTCYKDTGLW 398
GGGA A+ ++SVG+ S+ TC ++ LW
Sbjct: 897 GGGAGAAAAAGASSSVGSSTPGPSSYPTCTQNINLW 932
>M30114-1|AAA28754.1| 1218|Drosophila melanogaster biological clock
protein A protein.
Length = 1218
Score = 29.1 bits (62), Expect = 6.5
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = -3
Query: 505 GGGANNASYLARAASVGNLCHSFQSFNTCYKDTGLW 398
GGGA A+ ++SVG+ S+ TC ++ LW
Sbjct: 897 GGGAGAAAAAGASSSVGSSTPGPSSYPTCTQNINLW 932
>D00009-1|BAA00007.1| 570|Drosophila melanogaster proteoglycan
protein.
Length = 570
Score = 29.1 bits (62), Expect = 6.5
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = -3
Query: 505 GGGANNASYLARAASVGNLCHSFQSFNTCYKDTGLW 398
GGGA A+ ++SVG+ S+ TC ++ LW
Sbjct: 398 GGGAGAAAAAGASSSVGSSTPGPSSYPTCTQNINLW 433
>AL024485-7|CAA19677.1| 1156|Drosophila melanogaster
EG:155E2.4,FBgn0003068;per protein.
Length = 1156
Score = 29.1 bits (62), Expect = 6.5
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = -3
Query: 505 GGGANNASYLARAASVGNLCHSFQSFNTCYKDTGLW 398
GGGA A+ ++SVG+ S+ TC ++ LW
Sbjct: 829 GGGAGAAAAAGASSSVGSSTPGPSSYPTCTQNINLW 864
>AL024485-4|CAA19678.1| 1212|Drosophila melanogaster
EG:155E2.4,FBgn0003068;per protein.
Length = 1212
Score = 29.1 bits (62), Expect = 6.5
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = -3
Query: 505 GGGANNASYLARAASVGNLCHSFQSFNTCYKDTGLW 398
GGGA A+ ++SVG+ S+ TC ++ LW
Sbjct: 891 GGGAGAAAAAGASSSVGSSTPGPSSYPTCTQNINLW 926
>AF033029-1|AAB87476.1| 1224|Drosophila melanogaster period clock
protein protein.
Length = 1224
Score = 29.1 bits (62), Expect = 6.5
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = -3
Query: 505 GGGANNASYLARAASVGNLCHSFQSFNTCYKDTGLW 398
GGGA A+ ++SVG+ S+ TC ++ LW
Sbjct: 903 GGGAGAAAAAGASSSVGSSTPGPSSYPTCTQNINLW 938
>AE014298-440|AAF45804.1| 1218|Drosophila melanogaster CG2647-PA
protein.
Length = 1218
Score = 29.1 bits (62), Expect = 6.5
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = -3
Query: 505 GGGANNASYLARAASVGNLCHSFQSFNTCYKDTGLW 398
GGGA A+ ++SVG+ S+ TC ++ LW
Sbjct: 897 GGGAGAAAAAGASSSVGSSTPGPSSYPTCTQNINLW 932
>BT024202-1|ABC86264.1| 394|Drosophila melanogaster RE48774p
protein.
Length = 394
Score = 28.7 bits (61), Expect = 8.6
Identities = 16/50 (32%), Positives = 30/50 (60%)
Frame = -3
Query: 559 NIPLMVANTLIGAWDRSQGGGANNASYLARAASVGNLCHSFQSFNTCYKD 410
++ L++A TLI +W ++ G N S ++ + S GN ++F S +T + D
Sbjct: 6 SLALLLA-TLISSWPKASWGATGNGSIISVSNSSGN-NYAFTSEHTDHSD 53
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,509,169
Number of Sequences: 53049
Number of extensions: 664749
Number of successful extensions: 2298
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 2167
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2294
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3273062859
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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