Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt10d13
(625 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein. 110 9e-27
AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein. 110 9e-27
EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein. 108 4e-26
EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein. 108 4e-26
EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein. 100 2e-23
EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein. 100 2e-23
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot... 71 9e-15
AY242387-1|AAO72539.2| 693|Apis mellifera prophenoloxidase prot... 64 1e-12
AF134821-1|AAD40236.1| 226|Apis mellifera hexamerin protein. 54 1e-09
DQ257631-1|ABB82366.1| 424|Apis mellifera yellow e3-like protei... 24 1.4
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 21 7.4
AB050744-1|BAB17753.1| 238|Apis mellifera period protein protein. 21 7.4
AJ973401-1|CAJ01448.1| 130|Apis mellifera hypothetical protein ... 21 9.8
AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor ... 21 9.8
>EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein.
Length = 683
Score = 110 bits (265), Expect = 9e-27
Identities = 57/161 (35%), Positives = 89/161 (55%), Gaps = 6/161 (3%)
Frame = -2
Query: 606 VVKIFLAPKYDDNGIPLTLEDNWMKFFELDWFTTKLTAGQNKIIRNSNEFVIFKEDSVPM 427
+V+IFL PKYD+ G + L N+M F ++D F L +G N I RNS+E V D VP
Sbjct: 513 MVRIFLGPKYDEFGHEVDLVHNYMNFMQMDEFVVNLKSGSNTIERNSHESVFVVPDEVPS 572
Query: 426 TEIMKML---DEGKVPFDMSEEFCYMPKRLMLPRGTEGGFPFQLFVFVYPFDNKGK---D 265
+ L ++G F S + P+RL+LP+G + G P+ + V V PFD+ D
Sbjct: 573 DVLYNRLVVSEDGSETFKYSSQPYGFPERLLLPKGKKEGMPYNVLVVVSPFDDSNVVQID 632
Query: 264 LAPFESFVLDNKPLGFPLDRPVVDALFKVPNMYFKDIFIYH 142
+ + D + +GFPLD+PV L + N++ K++ ++H
Sbjct: 633 SPVWGRHIYDGRAMGFPLDKPVDPLLLVLSNIHVKEVLVHH 673
>AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein.
Length = 683
Score = 110 bits (265), Expect = 9e-27
Identities = 57/161 (35%), Positives = 89/161 (55%), Gaps = 6/161 (3%)
Frame = -2
Query: 606 VVKIFLAPKYDDNGIPLTLEDNWMKFFELDWFTTKLTAGQNKIIRNSNEFVIFKEDSVPM 427
+V+IFL PKYD+ G + L N+M F ++D F L +G N I RNS+E V D VP
Sbjct: 513 MVRIFLGPKYDEFGHEVDLVHNYMNFMQMDEFVVNLKSGSNTIERNSHESVFVVPDEVPS 572
Query: 426 TEIMKML---DEGKVPFDMSEEFCYMPKRLMLPRGTEGGFPFQLFVFVYPFDNKGK---D 265
+ L ++G F S + P+RL+LP+G + G P+ + V V PFD+ D
Sbjct: 573 DVLYNRLVVSEDGSETFKYSSQPYGFPERLLLPKGKKEGMPYNVLVVVSPFDDSNVVQID 632
Query: 264 LAPFESFVLDNKPLGFPLDRPVVDALFKVPNMYFKDIFIYH 142
+ + D + +GFPLD+PV L + N++ K++ ++H
Sbjct: 633 SPVWGRHIYDGRAMGFPLDKPVDPLLLVLSNIHVKEVLVHH 673
>EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein.
Length = 684
Score = 108 bits (260), Expect = 4e-26
Identities = 57/164 (34%), Positives = 88/164 (53%), Gaps = 5/164 (3%)
Frame = -2
Query: 609 AVVKIFLAPKYDDNGIPLTLEDNWMKFFELDWFTTKLTAGQNKIIRNSNEFVIFKEDSVP 430
A ++IF+ PKYD + + + ++ F+E+D + L +G NKI RNS + D P
Sbjct: 514 AAIRIFIGPKYDSHHKLIEIPEDLKYFYEIDNWMLDLNSGLNKITRNSLDCFFTMNDLEP 573
Query: 429 MTEIMKMLD---EGKVPFDMSEEFCYMPKRLMLPRGTEGGFPFQLFVFVYPFDNKGKDLA 259
+ ++ PF +E P RL+LPRG + G PFQLF++V P ++
Sbjct: 574 SEIFYEKIETSLNSDKPFTYNERIFGFPGRLLLPRGKKEGMPFQLFLYVSPVSSEYNQYN 633
Query: 258 P--FESFVLDNKPLGFPLDRPVVDALFKVPNMYFKDIFIYHEGE 133
+ + D + GFPLD+P+ D ++ PNM FKDI IYH+ E
Sbjct: 634 SRIWGGYKFDKRSFGFPLDKPLYDFNYEGPNMLFKDILIYHKDE 677
>EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein.
Length = 684
Score = 108 bits (260), Expect = 4e-26
Identities = 57/164 (34%), Positives = 88/164 (53%), Gaps = 5/164 (3%)
Frame = -2
Query: 609 AVVKIFLAPKYDDNGIPLTLEDNWMKFFELDWFTTKLTAGQNKIIRNSNEFVIFKEDSVP 430
A ++IF+ PKYD + + + ++ F+E+D + L +G NKI RNS + D P
Sbjct: 514 AAIRIFIGPKYDSHHKLIEIPEDLKYFYEIDNWMLDLNSGLNKITRNSLDCFFTMNDLEP 573
Query: 429 MTEIMKMLD---EGKVPFDMSEEFCYMPKRLMLPRGTEGGFPFQLFVFVYPFDNKGKDLA 259
+ ++ PF +E P RL+LPRG + G PFQLF++V P ++
Sbjct: 574 SEIFYEKIETSLNSDKPFTYNERIFGFPGRLLLPRGKKEGMPFQLFLYVSPVSSEYNQYN 633
Query: 258 P--FESFVLDNKPLGFPLDRPVVDALFKVPNMYFKDIFIYHEGE 133
+ + D + GFPLD+P+ D ++ PNM FKDI IYH+ E
Sbjct: 634 SRIWGGYKFDKRSFGFPLDKPLYDFNYEGPNMLFKDILIYHKDE 677
>EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein.
Length = 686
Score = 99.5 bits (237), Expect = 2e-23
Identities = 57/162 (35%), Positives = 85/162 (52%), Gaps = 7/162 (4%)
Frame = -2
Query: 606 VVKIFLAPKYDDNGIPLT-LEDNWMKFFELDWFTTKLTAGQNKIIRNSNEFVIFKEDSVP 430
+++IFL P +D+ + L+ + F E+D F L G N I R S+E +P
Sbjct: 516 MMRIFLGPAFDEIKHDMVYLQKYFYLFMEMDRFAVTLRPGSNSIERQSSESPFTTSTIMP 575
Query: 429 MTEIMKMLDE---GKVPFDMSEEFCYMPKRLMLPRGTEGGFPFQLFVFVYPFDN---KGK 268
L++ G PF SE+ P+RL+LPRG G +++F F+ D K
Sbjct: 576 SDIFYDKLNKAIGGSEPFTYSEKMLGFPERLILPRGKPEGMRYKMFFFLSSMDESNTKSY 635
Query: 267 DLAPFESFVLDNKPLGFPLDRPVVDALFKVPNMYFKDIFIYH 142
++ + LD+K GFPLDRP+ F +PNMYFKD+FIY+
Sbjct: 636 EIPLYGKMTLDDKVFGFPLDRPMWAWNFTIPNMYFKDVFIYN 677
>EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein.
Length = 686
Score = 99.5 bits (237), Expect = 2e-23
Identities = 57/162 (35%), Positives = 85/162 (52%), Gaps = 7/162 (4%)
Frame = -2
Query: 606 VVKIFLAPKYDDNGIPLT-LEDNWMKFFELDWFTTKLTAGQNKIIRNSNEFVIFKEDSVP 430
+++IFL P +D+ + L+ + F E+D F L G N I R S+E +P
Sbjct: 516 MMRIFLGPAFDEIKHDMVYLQKYFYLFMEMDRFAVTLRPGSNSIERQSSESPFTTSTIMP 575
Query: 429 MTEIMKMLDE---GKVPFDMSEEFCYMPKRLMLPRGTEGGFPFQLFVFVYPFDN---KGK 268
L++ G PF SE+ P+RL+LPRG G +++F F+ D K
Sbjct: 576 SDIFYDKLNKAIGGSEPFTYSEKMLGFPERLILPRGKPEGMRYKMFFFLSSMDESNTKSY 635
Query: 267 DLAPFESFVLDNKPLGFPLDRPVVDALFKVPNMYFKDIFIYH 142
++ + LD+K GFPLDRP+ F +PNMYFKD+FIY+
Sbjct: 636 EIPLYGKMTLDDKVFGFPLDRPMWAWNFTIPNMYFKDVFIYN 677
>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
protein.
Length = 1010
Score = 70.9 bits (166), Expect = 9e-15
Identities = 41/111 (36%), Positives = 60/111 (54%), Gaps = 5/111 (4%)
Frame = -2
Query: 609 AVVKIFLAPKYDDNGIPLTLEDNWMKFFELDWFTTKLTAGQNKIIRNSNEFVIFKEDSVP 430
AVV++FL PK+D G P+++ N F ELD F L AG+N IIRNS + D
Sbjct: 533 AVVRVFLGPKHDHQGRPISISKNQHLFVELDQFIQNLHAGENTIIRNSQQAPGQSPDWPS 592
Query: 429 MTEIMKMLD---EGKVPFDMSE--EFCYMPKRLMLPRGTEGGFPFQLFVFV 292
++I + ++ + PF ++E + P RL LP+G GFP Q V +
Sbjct: 593 TSQIQRGVNAAIRSQEPFYITEPHQIFSFPARLSLPKGQPQGFPLQFLVVI 643
Score = 52.0 bits (119), Expect = 5e-09
Identities = 19/36 (52%), Positives = 27/36 (75%)
Frame = -2
Query: 240 LDNKPLGFPLDRPVVDALFKVPNMYFKDIFIYHEGE 133
LD KPLGFPLDRP+ VPN++ KD+ ++H+G+
Sbjct: 968 LDGKPLGFPLDRPLSLGALSVPNIFVKDVLVFHQGQ 1003
>AY242387-1|AAO72539.2| 693|Apis mellifera prophenoloxidase
protein.
Length = 693
Score = 63.7 bits (148), Expect = 1e-12
Identities = 36/116 (31%), Positives = 58/116 (50%), Gaps = 5/116 (4%)
Frame = -2
Query: 624 NVASDAVVKIFLAPKYDDNGIPLTLEDNWMKFFELDWFTTKLTAGQNKIIRNSNEFVIFK 445
N + V+IF+ PK D+ G+P T + ELD F L G+N I + S + +
Sbjct: 494 NTSMKGTVRIFIGPKEDERGLPFTFREQKNLMIELDKFPITLQPGKNTIEQKSTKSSV-- 551
Query: 444 EDSVPMTEIMKMLDEGK-VPFDMSEEF----CYMPKRLMLPRGTEGGFPFQLFVFV 292
++P + LDE + + D E F C P+ +++P+G + GF +LFV V
Sbjct: 552 --TIPFERTFRNLDENRPIGGDSLERFDFCGCGWPQHMLIPKGNKEGFAMELFVMV 605
>AF134821-1|AAD40236.1| 226|Apis mellifera hexamerin protein.
Length = 226
Score = 53.6 bits (123), Expect = 1e-09
Identities = 26/61 (42%), Positives = 35/61 (57%)
Frame = -2
Query: 606 VVKIFLAPKYDDNGIPLTLEDNWMKFFELDWFTTKLTAGQNKIIRNSNEFVIFKEDSVPM 427
+V+IFL PKYD+ G + L N+M F ++D F L +G N I RNS+E VP
Sbjct: 139 MVRIFLGPKYDEFGHEVDLVHNYMNFMQMDEFVVNLKSGSNTIERNSHESXFVVPTRVPA 198
Query: 426 T 424
T
Sbjct: 199 T 199
>DQ257631-1|ABB82366.1| 424|Apis mellifera yellow e3-like protein
protein.
Length = 424
Score = 23.8 bits (49), Expect = 1.4
Identities = 17/43 (39%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = +2
Query: 83 TLDCVSYEGILNL*GNRSPSW*MKISL-KYMLGTLNNASTTGR 208
TL S I++ +R W IS KYM GTLN+ T R
Sbjct: 355 TLQFPSGMKIISSKKDRQELWIFTISFQKYMSGTLNSNETNFR 397
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 21.4 bits (43), Expect = 7.4
Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 2/44 (4%)
Frame = -2
Query: 570 NGIPLTLEDNWMKFFELDWFTTKL--TAGQNKIIRNSNEFVIFK 445
NG + LE W F W T KL GQ++I++ IF+
Sbjct: 381 NGDYVVLETEWSSFIN-PW-TKKLEFVVGQHRILKGPANPDIFR 422
>AB050744-1|BAB17753.1| 238|Apis mellifera period protein protein.
Length = 238
Score = 21.4 bits (43), Expect = 7.4
Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 2/44 (4%)
Frame = -2
Query: 570 NGIPLTLEDNWMKFFELDWFTTKL--TAGQNKIIRNSNEFVIFK 445
NG + LE W F W T KL GQ++I++ IF+
Sbjct: 87 NGDYVVLETEWSSFIN-PW-TKKLEFVVGQHRILKGPANPDIFR 128
>AJ973401-1|CAJ01448.1| 130|Apis mellifera hypothetical protein
protein.
Length = 130
Score = 21.0 bits (42), Expect = 9.8
Identities = 9/35 (25%), Positives = 20/35 (57%)
Frame = +1
Query: 253 ERSQVLAFVVEWIDENKELEWESTFSTSRQHESFR 357
++ +V+ V++++ ENK W+S + + FR
Sbjct: 82 KQREVIKKVIKFLVENKPELWDSLANKYDPDKKFR 116
>AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor A
isoform protein.
Length = 567
Score = 21.0 bits (42), Expect = 9.8
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +2
Query: 287 G*TKTKSWNGNPPSVPLGS 343
G + T + PPSVP+GS
Sbjct: 43 GTSTTAAATPTPPSVPVGS 61
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 180,553
Number of Sequences: 438
Number of extensions: 3912
Number of successful extensions: 32
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18582456
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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