Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt10d10
(697 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY058337-1|AAL13566.1| 490|Drosophila melanogaster GH11113p pro... 50 4e-06
AE014296-1561|AAN11980.1| 490|Drosophila melanogaster CG5288-PC... 50 4e-06
AE014296-1560|AAF50337.2| 490|Drosophila melanogaster CG5288-PB... 50 4e-06
AE014296-1559|AAF50338.2| 490|Drosophila melanogaster CG5288-PA... 50 4e-06
BT001593-1|AAN71348.1| 750|Drosophila melanogaster RE27538p pro... 33 0.49
AJ011925-1|CAA09870.1| 2285|Drosophila melanogaster Kakapo protein. 33 0.49
AJ011924-1|CAA09869.1| 2396|Drosophila melanogaster Kakapo protein. 33 0.49
AE014296-790|AAF47859.2| 750|Drosophila melanogaster CG15005-PA... 33 0.49
AE014298-1714|AAF48114.1| 1373|Drosophila melanogaster CG15737-P... 31 1.1
BT024389-1|ABC86451.1| 122|Drosophila melanogaster IP05464p pro... 31 1.5
AE014296-2379|AAF49745.1| 102|Drosophila melanogaster CG13482-P... 31 1.5
AY113372-1|AAM29377.1| 526|Drosophila melanogaster LP02990p pro... 29 6.0
AY069512-1|AAL39657.1| 857|Drosophila melanogaster LD23217p pro... 29 6.0
AE014298-1231|AAS65293.1| 1006|Drosophila melanogaster CG12075-P... 29 6.0
AE014298-1230|AAF46414.3| 1006|Drosophila melanogaster CG12075-P... 29 6.0
AE014134-48|AAF51541.1| 953|Drosophila melanogaster CG4648-PA p... 29 6.0
BT012441-1|AAS93712.1| 1423|Drosophila melanogaster RH07858p pro... 29 8.0
AE014296-102|ABC66119.1| 110|Drosophila melanogaster CG13885-PA... 29 8.0
AE013599-3832|AAF47176.3| 1423|Drosophila melanogaster CG3328-PA... 29 8.0
>AY058337-1|AAL13566.1| 490|Drosophila melanogaster GH11113p
protein.
Length = 490
Score = 49.6 bits (113), Expect = 4e-06
Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 7/92 (7%)
Frame = -1
Query: 343 RRARHVIGEIQRTV-------EAAIKLTEKNYKRVGELFYQSHDSLSKLMEVSCVELDQI 185
+RA HVI E R E A ++ K++GEL QSH+SL +L E S +++++
Sbjct: 353 QRALHVIQESGRVAKFRKICEELAGGANKEGAKQLGELMRQSHESLRELYECSHPDVERL 412
Query: 184 VDILRDAPGVYGARMTGGGFGGCAVALVQKSE 89
+ I AR+TG G+GGC VA+ E
Sbjct: 413 IAISNQQN--VSARVTGAGWGGCIVAMCDSIE 442
>AE014296-1561|AAN11980.1| 490|Drosophila melanogaster CG5288-PC,
isoform C protein.
Length = 490
Score = 49.6 bits (113), Expect = 4e-06
Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 7/92 (7%)
Frame = -1
Query: 343 RRARHVIGEIQRTV-------EAAIKLTEKNYKRVGELFYQSHDSLSKLMEVSCVELDQI 185
+RA HVI E R E A ++ K++GEL QSH+SL +L E S +++++
Sbjct: 353 QRALHVIQESGRVAKFRKICEELAGGANKEGAKQLGELMRQSHESLRELYECSHPDVERL 412
Query: 184 VDILRDAPGVYGARMTGGGFGGCAVALVQKSE 89
+ I AR+TG G+GGC VA+ E
Sbjct: 413 IAISNQQN--VSARVTGAGWGGCIVAMCDSIE 442
>AE014296-1560|AAF50337.2| 490|Drosophila melanogaster CG5288-PB,
isoform B protein.
Length = 490
Score = 49.6 bits (113), Expect = 4e-06
Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 7/92 (7%)
Frame = -1
Query: 343 RRARHVIGEIQRTV-------EAAIKLTEKNYKRVGELFYQSHDSLSKLMEVSCVELDQI 185
+RA HVI E R E A ++ K++GEL QSH+SL +L E S +++++
Sbjct: 353 QRALHVIQESGRVAKFRKICEELAGGANKEGAKQLGELMRQSHESLRELYECSHPDVERL 412
Query: 184 VDILRDAPGVYGARMTGGGFGGCAVALVQKSE 89
+ I AR+TG G+GGC VA+ E
Sbjct: 413 IAISNQQN--VSARVTGAGWGGCIVAMCDSIE 442
>AE014296-1559|AAF50338.2| 490|Drosophila melanogaster CG5288-PA,
isoform A protein.
Length = 490
Score = 49.6 bits (113), Expect = 4e-06
Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 7/92 (7%)
Frame = -1
Query: 343 RRARHVIGEIQRTV-------EAAIKLTEKNYKRVGELFYQSHDSLSKLMEVSCVELDQI 185
+RA HVI E R E A ++ K++GEL QSH+SL +L E S +++++
Sbjct: 353 QRALHVIQESGRVAKFRKICEELAGGANKEGAKQLGELMRQSHESLRELYECSHPDVERL 412
Query: 184 VDILRDAPGVYGARMTGGGFGGCAVALVQKSE 89
+ I AR+TG G+GGC VA+ E
Sbjct: 413 IAISNQQN--VSARVTGAGWGGCIVAMCDSIE 442
>BT001593-1|AAN71348.1| 750|Drosophila melanogaster RE27538p
protein.
Length = 750
Score = 32.7 bits (71), Expect = 0.49
Identities = 15/30 (50%), Positives = 17/30 (56%)
Frame = +1
Query: 82 HPIRSFEPKPPHIHRSHLPSFSHHTPLEHP 171
HP + P PPHI S PSF HT +E P
Sbjct: 71 HPKIKYGPPPPHIRYSK-PSFPAHTHIEEP 99
>AJ011925-1|CAA09870.1| 2285|Drosophila melanogaster Kakapo protein.
Length = 2285
Score = 32.7 bits (71), Expect = 0.49
Identities = 24/81 (29%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Frame = -1
Query: 415 TSLRAANMQDLDRLRDLGC-NELVIRRARHVIGEIQRTVEAAIKLT--EKNYKRVGELFY 245
T++R A D D+L G N+ +RR R + E+ R + K E+ K+ +F
Sbjct: 919 TAIRRALNDDADKLLSEGDPNDPQLRRLRREMDEVNRLFDEFEKRARAEEESKQASRIFT 978
Query: 244 QSHDSLSKLMEVSCVELDQIV 182
+ S+ +E ELDQI+
Sbjct: 979 EECLSIKSKLEDMARELDQII 999
>AJ011924-1|CAA09869.1| 2396|Drosophila melanogaster Kakapo protein.
Length = 2396
Score = 32.7 bits (71), Expect = 0.49
Identities = 24/81 (29%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Frame = -1
Query: 415 TSLRAANMQDLDRLRDLGC-NELVIRRARHVIGEIQRTVEAAIKLT--EKNYKRVGELFY 245
T++R A D D+L G N+ +RR R + E+ R + K E+ K+ +F
Sbjct: 1030 TAIRRALNDDADKLLSEGDPNDPQLRRLRREMDEVNRLFDEFEKRARAEEESKQASRIFT 1089
Query: 244 QSHDSLSKLMEVSCVELDQIV 182
+ S+ +E ELDQI+
Sbjct: 1090 EECLSIKSKLEDMARELDQII 1110
>AE014296-790|AAF47859.2| 750|Drosophila melanogaster CG15005-PA
protein.
Length = 750
Score = 32.7 bits (71), Expect = 0.49
Identities = 15/30 (50%), Positives = 17/30 (56%)
Frame = +1
Query: 82 HPIRSFEPKPPHIHRSHLPSFSHHTPLEHP 171
HP + P PPHI S PSF HT +E P
Sbjct: 71 HPKIKYGPPPPHIRYSK-PSFPAHTHIEEP 99
>AE014298-1714|AAF48114.1| 1373|Drosophila melanogaster CG15737-PA
protein.
Length = 1373
Score = 31.5 bits (68), Expect = 1.1
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +1
Query: 118 IHRSHLPSFSHHTPLEHPGGCPLSDRAPRRIPP 216
+H+ H PS + H P GG +S P R PP
Sbjct: 882 LHQQHPPSHASHRPHGQMGGHAMSSYVPHRPPP 914
>BT024389-1|ABC86451.1| 122|Drosophila melanogaster IP05464p
protein.
Length = 122
Score = 31.1 bits (67), Expect = 1.5
Identities = 12/29 (41%), Positives = 14/29 (48%), Gaps = 1/29 (3%)
Frame = +1
Query: 85 PIRSFEPKPP-HIHRSHLPSFSHHTPLEH 168
P+ + P PP H H H P HH P H
Sbjct: 54 PVHHYHPPPPVHHHHHHGPPMHHHGPPPH 82
>AE014296-2379|AAF49745.1| 102|Drosophila melanogaster CG13482-PA
protein.
Length = 102
Score = 31.1 bits (67), Expect = 1.5
Identities = 12/29 (41%), Positives = 14/29 (48%), Gaps = 1/29 (3%)
Frame = +1
Query: 85 PIRSFEPKPP-HIHRSHLPSFSHHTPLEH 168
P+ + P PP H H H P HH P H
Sbjct: 34 PVHHYHPPPPVHHHHHHGPPMHHHGPPPH 62
>AY113372-1|AAM29377.1| 526|Drosophila melanogaster LP02990p
protein.
Length = 526
Score = 29.1 bits (62), Expect = 6.0
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +1
Query: 118 IHRSHLPSFSHHTPLEHPGGCPLSDRAPRRIPPS 219
I + +P+ + HTPL+H RA RRI PS
Sbjct: 247 IGNTSVPAKAQHTPLKHKSKTSYFLRAQRRISPS 280
>AY069512-1|AAL39657.1| 857|Drosophila melanogaster LD23217p
protein.
Length = 857
Score = 29.1 bits (62), Expect = 6.0
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = +1
Query: 67 SAVSKHPIRSFEPKPPHIHRSHLPSFSHHTPL 162
S VS+ P PH H H P HH PL
Sbjct: 82 SPVSRSPPHGNSKSHPHAHPHHPPHSLHHPPL 113
>AE014298-1231|AAS65293.1| 1006|Drosophila melanogaster CG12075-PB,
isoform B protein.
Length = 1006
Score = 29.1 bits (62), Expect = 6.0
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = +1
Query: 67 SAVSKHPIRSFEPKPPHIHRSHLPSFSHHTPL 162
S VS+ P PH H H P HH PL
Sbjct: 231 SPVSRSPPHGNSKSHPHAHPHHPPHSLHHPPL 262
>AE014298-1230|AAF46414.3| 1006|Drosophila melanogaster CG12075-PA,
isoform A protein.
Length = 1006
Score = 29.1 bits (62), Expect = 6.0
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = +1
Query: 67 SAVSKHPIRSFEPKPPHIHRSHLPSFSHHTPL 162
S VS+ P PH H H P HH PL
Sbjct: 231 SPVSRSPPHGNSKSHPHAHPHHPPHSLHHPPL 262
>AE014134-48|AAF51541.1| 953|Drosophila melanogaster CG4648-PA
protein.
Length = 953
Score = 29.1 bits (62), Expect = 6.0
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +1
Query: 118 IHRSHLPSFSHHTPLEHPGGCPLSDRAPRRIPPS 219
I + +P+ + HTPL+H RA RRI PS
Sbjct: 674 IGNTSVPAKAQHTPLKHKSKTSYFLRAQRRISPS 707
>BT012441-1|AAS93712.1| 1423|Drosophila melanogaster RH07858p
protein.
Length = 1423
Score = 28.7 bits (61), Expect = 8.0
Identities = 13/48 (27%), Positives = 21/48 (43%)
Frame = +2
Query: 74 FQSIQFALLNQSHRTSTEATSRHSRTIHPWSIPEDVHYLIELHAGYLH 217
F ++F NQ+ R + R + HP I H + ++ G LH
Sbjct: 453 FYGVKFEAPNQTIRVEQSQSDRSKKAFHPVPIDLQKHIVSKITVGRLH 500
>AE014296-102|ABC66119.1| 110|Drosophila melanogaster CG13885-PA
protein.
Length = 110
Score = 28.7 bits (61), Expect = 8.0
Identities = 17/46 (36%), Positives = 19/46 (41%), Gaps = 2/46 (4%)
Frame = +1
Query: 82 HPIRSFEPKPPHIH-RSHLPSFSHHTP-LEHPGGCPLSDRAPRRIP 213
HPI S H H H S HH P L GG P+ P+ P
Sbjct: 44 HPIHSHHHHHSHSHPHPHPHSHPHHHPHLGTAGGMPMDLHVPQGFP 89
>AE013599-3832|AAF47176.3| 1423|Drosophila melanogaster CG3328-PA
protein.
Length = 1423
Score = 28.7 bits (61), Expect = 8.0
Identities = 13/48 (27%), Positives = 21/48 (43%)
Frame = +2
Query: 74 FQSIQFALLNQSHRTSTEATSRHSRTIHPWSIPEDVHYLIELHAGYLH 217
F ++F NQ+ R + R + HP I H + ++ G LH
Sbjct: 453 FYGVKFEAPNQTIRVEQSQSDRSKKAFHPVPIDLQKHIVSKITVGRLH 500
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,125,265
Number of Sequences: 53049
Number of extensions: 796634
Number of successful extensions: 2796
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 2578
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2778
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3046624548
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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