Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt10d08
(259 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB022907-1|BAA86908.1| 615|Apis mellifera glucose oxidase protein. 23 0.60
DQ201783-1|ABB05503.1| 381|Apis mellifera capa receptor-like GP... 23 0.80
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 22 1.1
DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor pr... 22 1.4
DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like recept... 21 3.2
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 20 5.6
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 20 5.6
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 20 5.6
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 20 5.6
Y13429-1|CAA73841.1| 402|Apis mellifera dopamine receptor, D1 p... 19 7.4
AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein ... 19 7.4
DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein. 19 9.8
>AB022907-1|BAA86908.1| 615|Apis mellifera glucose oxidase protein.
Length = 615
Score = 23.0 bits (47), Expect = 0.60
Identities = 8/25 (32%), Positives = 14/25 (56%)
Frame = -3
Query: 77 VCHPSLGVGQYQALPRQAIKLSQKN 3
+C P L + A +QA+++S N
Sbjct: 429 ICKPKLKIADLSAHDKQAVRMSALN 453
>DQ201783-1|ABB05503.1| 381|Apis mellifera capa receptor-like GPCR
protein.
Length = 381
Score = 22.6 bits (46), Expect = 0.80
Identities = 9/28 (32%), Positives = 15/28 (53%)
Frame = +3
Query: 99 ARKIISPLETLFLGGVQITLMFLCWATF 182
+R+I S + + + L F+CWA F
Sbjct: 259 SRQIQSRKSVIKMLSAVVILFFICWAPF 286
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 22.2 bits (45), Expect = 1.1
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = -3
Query: 104 PRRPDGGGLVCHPSLGVGQYQALPRQAIKLSQKN 3
PRR + L C P L GQ Q+ P+ + + N
Sbjct: 341 PRRKNNCPLHCKPEL--GQSQSSPKFVARREESN 372
>DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor
protein.
Length = 459
Score = 21.8 bits (44), Expect = 1.4
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +3
Query: 126 TLFLGGVQITLMFLCWATF 182
T L V IT F+CWA F
Sbjct: 259 TRMLSAVVITF-FICWAPF 276
>DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like receptor
2 protein.
Length = 581
Score = 20.6 bits (41), Expect = 3.2
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = +3
Query: 150 ITLMFLCWATFLKIWLLA 203
+ F+CWA F LLA
Sbjct: 291 VVAFFICWAPFHAQRLLA 308
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 19.8 bits (39), Expect = 5.6
Identities = 5/12 (41%), Positives = 10/12 (83%)
Frame = -1
Query: 79 WSAIPAWVLVNI 44
W+A+PA V++ +
Sbjct: 326 WNAVPARVMIGV 337
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 19.8 bits (39), Expect = 5.6
Identities = 5/12 (41%), Positives = 10/12 (83%)
Frame = -1
Query: 79 WSAIPAWVLVNI 44
W+A+PA V++ +
Sbjct: 295 WNAVPARVMIGV 306
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 19.8 bits (39), Expect = 5.6
Identities = 5/12 (41%), Positives = 10/12 (83%)
Frame = -1
Query: 79 WSAIPAWVLVNI 44
W+A+PA V++ +
Sbjct: 346 WNAVPARVMIGV 357
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 19.8 bits (39), Expect = 5.6
Identities = 5/12 (41%), Positives = 10/12 (83%)
Frame = -1
Query: 79 WSAIPAWVLVNI 44
W+A+PA V++ +
Sbjct: 295 WNAVPARVMIGV 306
>Y13429-1|CAA73841.1| 402|Apis mellifera dopamine receptor, D1
protein.
Length = 402
Score = 19.4 bits (38), Expect = 7.4
Identities = 9/27 (33%), Positives = 15/27 (55%)
Frame = +2
Query: 125 NLVSWRSADNAHVPLLGDILKDLVVSA 205
N+ SAD+ V ++ +D +VSA
Sbjct: 375 NISPRSSADSCQVGIMAQRHRDTIVSA 401
>AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein
protein.
Length = 352
Score = 19.4 bits (38), Expect = 7.4
Identities = 6/21 (28%), Positives = 9/21 (42%)
Frame = +2
Query: 53 QHPGWDGRPAHHHQAGEEDHL 115
QHP + H ++ HL
Sbjct: 175 QHPHMQPQQGQHQSQAQQQHL 195
>DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein.
Length = 828
Score = 19.0 bits (37), Expect = 9.8
Identities = 11/35 (31%), Positives = 14/35 (40%)
Frame = +2
Query: 68 DGRPAHHHQAGEEDHLTSGNLVSWRSADNAHVPLL 172
D RP HQ T G++ R + PLL
Sbjct: 112 DERPNSIHQRASFSLNTDGDIAGLRKKKHKVNPLL 146
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,872
Number of Sequences: 438
Number of extensions: 1449
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 48
effective length of database: 125,319
effective search space used: 4636803
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)
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