Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmmt10d07
         (297 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BX537919-1|CAD97902.1|  621|Homo sapiens hypothetical protein pr...    28   6.2  
BC131733-1|AAI31734.1| 1509|Homo sapiens ADAMTS12 protein protein.     27   8.2  
AJ250725-1|CAC20419.1| 1593|Homo sapiens a disintegrin-like and ...    27   8.2  

>BX537919-1|CAD97902.1|  621|Homo sapiens hypothetical protein
           protein.
          Length = 621

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 14/41 (34%), Positives = 19/41 (46%)
 Frame = +3

Query: 87  RPLNSRNTTGLKLQCFPPLFPMR*SRAEVPRLGSKTLPCKE 209
           +P+NS+  TG   Q  PP+   R      P   SKT+   E
Sbjct: 121 KPINSKAVTGQTTQVSPPVIAGRVLSQSTPGTPSKTITISE 161


>BC131733-1|AAI31734.1| 1509|Homo sapiens ADAMTS12 protein protein.
          Length = 1509

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 12/33 (36%), Positives = 16/33 (48%)
 Frame = +2

Query: 155  LKPSRGATIGIKNPPMQRTAPPTMLTIRAVKNP 253
            LKP++G     KNPP  +  PP     R +  P
Sbjct: 918  LKPNKGTISNGKNPPTLKPVPPPTSRPRMLTTP 950


>AJ250725-1|CAC20419.1| 1593|Homo sapiens a disintegrin-like and
            metalloprotease (reprolysin type) with thrombospondin ty
            protein.
          Length = 1593

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 12/33 (36%), Positives = 16/33 (48%)
 Frame = +2

Query: 155  LKPSRGATIGIKNPPMQRTAPPTMLTIRAVKNP 253
            LKP++G     KNPP  +  PP     R +  P
Sbjct: 1002 LKPNKGTISNGKNPPTLKPVPPPTSRPRMLTTP 1034


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 45,073,189
Number of Sequences: 237096
Number of extensions: 896100
Number of successful extensions: 1426
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1402
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1425
length of database: 76,859,062
effective HSP length: 75
effective length of database: 59,076,862
effective search space used: 1358767826
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)