Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt10d02
(517 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X63454-1|CAA45054.1| 198|Homo sapiens hst-2 (FGF-6) protein. 34 0.34
X57075-3|CAA40360.1| 82|Homo sapiens FGF6 protein. 34 0.34
X57075-2|CAA40359.1| 105|Homo sapiens FGF6 protein. 34 0.34
X57075-1|CAA40358.1| 115|Homo sapiens FGF6 protein. 34 0.34
BC121098-1|AAI21099.1| 208|Homo sapiens fibroblast growth facto... 34 0.34
BC121097-1|AAI21098.1| 208|Homo sapiens fibroblast growth facto... 34 0.34
AY581424-1|AAS79318.1| 208|Homo sapiens fibroblast growth facto... 34 0.34
S83341-1|AAB50777.1| 81|Homo sapiens prion protein protein. 32 1.4
S80539-1|AAB21334.1| 97|Homo sapiens PrP amyloid protein. 32 1.4
S79978-1|AAB35416.1| 89|Homo sapiens prion protein protein. 32 1.4
AY458651-1|AAR21603.1| 277|Homo sapiens prion protein protein. 32 1.4
AF085477-1|AAC62750.2| 285|Homo sapiens prion protein precursor... 32 1.4
Y13247-1|CAA73697.1| 940|Homo sapiens FB19 protein protein. 31 3.2
BX248507-1|CAI18567.1| 940|Homo sapiens protein phosphatase 1, ... 30 5.5
BX119957-5|CAM25909.1| 940|Homo sapiens protein phosphatase 1 r... 30 5.5
BA000025-74|BAB63324.1| 940|Homo sapiens FB19 protein. 30 5.5
AL662825-9|CAI17838.1| 940|Homo sapiens protein phosphatase 1, ... 30 5.5
AL662800-9|CAI18160.1| 940|Homo sapiens protein phosphatase 1, ... 30 5.5
AJ544537-1|CAD67521.1| 940|Homo sapiens protein phospahatase nu... 30 5.5
AB202094-1|BAE78613.1| 940|Homo sapiens protein phosphatase 1, ... 30 5.5
AB103603-1|BAF31264.1| 940|Homo sapiens FB19 protein protein. 30 5.5
AB088097-1|BAC54929.1| 940|Homo sapiens protein phosphatase 1, ... 30 5.5
AY083269-1|AAL89527.1| 352|Homo sapiens transcription factor ma... 29 7.3
AK128621-1|BAC87535.1| 136|Homo sapiens protein ( Homo sapiens ... 29 7.3
AB086960-1|BAC20389.1| 352|Homo sapiens pancreatic beta-cell sp... 29 7.3
BC060860-1|AAH60860.2| 518|Homo sapiens family with sequence si... 29 9.7
AK074867-1|BAC11255.1| 519|Homo sapiens protein ( Homo sapiens ... 29 9.7
>X63454-1|CAA45054.1| 198|Homo sapiens hst-2 (FGF-6) protein.
Length = 198
Score = 33.9 bits (74), Expect = 0.34
Identities = 19/64 (29%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Frame = +1
Query: 322 ARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRGYTRSLGNNYRARYY-DGRISND 498
+RG +S G G + V+W G+ G+ R Y ++G + + DGRIS
Sbjct: 41 SRGWGTLLSRSRAGLAGEIAGVNWESGYLVGIKRQRRLYC-NVGIGFHLQVLPDGRISGT 99
Query: 499 HGRN 510
H N
Sbjct: 100 HEEN 103
>X57075-3|CAA40360.1| 82|Homo sapiens FGF6 protein.
Length = 82
Score = 33.9 bits (74), Expect = 0.34
Identities = 19/64 (29%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Frame = +1
Query: 322 ARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRGYTRSLGNNYRARYY-DGRISND 498
+RG +S G G + V+W G+ G+ R Y ++G + + DGRIS
Sbjct: 18 SRGWGTLLSRSRAGLAGEIAGVNWESGYLVGIKRQRRLYC-NVGIGFHLQVLPDGRISGT 76
Query: 499 HGRN 510
H N
Sbjct: 77 HEEN 80
>X57075-2|CAA40359.1| 105|Homo sapiens FGF6 protein.
Length = 105
Score = 33.9 bits (74), Expect = 0.34
Identities = 19/64 (29%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Frame = +1
Query: 322 ARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRGYTRSLGNNYRARYY-DGRISND 498
+RG +S G G + V+W G+ G+ R Y ++G + + DGRIS
Sbjct: 41 SRGWGTLLSRSRAGLAGEIAGVNWESGYLVGIKRQRRLYC-NVGIGFHLQVLPDGRISGT 99
Query: 499 HGRN 510
H N
Sbjct: 100 HEEN 103
>X57075-1|CAA40358.1| 115|Homo sapiens FGF6 protein.
Length = 115
Score = 33.9 bits (74), Expect = 0.34
Identities = 19/64 (29%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Frame = +1
Query: 322 ARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRGYTRSLGNNYRARYY-DGRISND 498
+RG +S G G + V+W G+ G+ R Y ++G + + DGRIS
Sbjct: 51 SRGWGTLLSRSRAGLAGEIAGVNWESGYLVGIKRQRRLYC-NVGIGFHLQVLPDGRISGT 109
Query: 499 HGRN 510
H N
Sbjct: 110 HEEN 113
>BC121098-1|AAI21099.1| 208|Homo sapiens fibroblast growth factor 6
protein.
Length = 208
Score = 33.9 bits (74), Expect = 0.34
Identities = 19/64 (29%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Frame = +1
Query: 322 ARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRGYTRSLGNNYRARYY-DGRISND 498
+RG +S G G + V+W G+ G+ R Y ++G + + DGRIS
Sbjct: 51 SRGWGTLLSRSRAGLAGEIAGVNWESGYLVGIKRQRRLYC-NVGIGFHLQVLPDGRISGT 109
Query: 499 HGRN 510
H N
Sbjct: 110 HEEN 113
>BC121097-1|AAI21098.1| 208|Homo sapiens fibroblast growth factor 6
protein.
Length = 208
Score = 33.9 bits (74), Expect = 0.34
Identities = 19/64 (29%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Frame = +1
Query: 322 ARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRGYTRSLGNNYRARYY-DGRISND 498
+RG +S G G + V+W G+ G+ R Y ++G + + DGRIS
Sbjct: 51 SRGWGTLLSRSRAGLAGEIAGVNWESGYLVGIKRQRRLYC-NVGIGFHLQVLPDGRISGT 109
Query: 499 HGRN 510
H N
Sbjct: 110 HEEN 113
>AY581424-1|AAS79318.1| 208|Homo sapiens fibroblast growth factor 6
protein.
Length = 208
Score = 33.9 bits (74), Expect = 0.34
Identities = 19/64 (29%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Frame = +1
Query: 322 ARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRGYTRSLGNNYRARYY-DGRISND 498
+RG +S G G + V+W G+ G+ R Y ++G + + DGRIS
Sbjct: 51 SRGWGTLLSRSRAGLAGEIAGVNWESGYLVGIKRQRRLYC-NVGIGFHLQVLPDGRISGT 109
Query: 499 HGRN 510
H N
Sbjct: 110 HEEN 113
>S83341-1|AAB50777.1| 81|Homo sapiens prion protein protein.
Length = 81
Score = 31.9 bits (69), Expect = 1.4
Identities = 13/39 (33%), Positives = 15/39 (38%)
Frame = +1
Query: 319 WARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRG 435
W + H G HGG G W + H GG H G
Sbjct: 7 WGQPHGGGWGQPHGGGWGQPHGGGWGQPHGGGWGQPHGG 45
Score = 31.9 bits (69), Expect = 1.4
Identities = 13/39 (33%), Positives = 15/39 (38%)
Frame = +1
Query: 319 WARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRG 435
W + H G HGG G W + H GG H G
Sbjct: 15 WGQPHGGGWGQPHGGGWGQPHGGGWGQPHGGGWGQPHGG 53
Score = 31.9 bits (69), Expect = 1.4
Identities = 13/39 (33%), Positives = 15/39 (38%)
Frame = +1
Query: 319 WARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRG 435
W + H G HGG G W + H GG H G
Sbjct: 23 WGQPHGGGWGQPHGGGWGQPHGGGWGQPHGGGWGQPHGG 61
Score = 31.9 bits (69), Expect = 1.4
Identities = 13/39 (33%), Positives = 15/39 (38%)
Frame = +1
Query: 319 WARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRG 435
W + H G HGG G W + H GG H G
Sbjct: 31 WGQPHGGGWGQPHGGGWGQPHGGGWGQPHGGGWGQPHGG 69
Score = 31.9 bits (69), Expect = 1.4
Identities = 13/39 (33%), Positives = 15/39 (38%)
Frame = +1
Query: 319 WARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRG 435
W + H G HGG G W + H GG H G
Sbjct: 39 WGQPHGGGWGQPHGGGWGQPHGGGWGQPHGGGWGQPHGG 77
>S80539-1|AAB21334.1| 97|Homo sapiens PrP amyloid protein.
Length = 97
Score = 31.9 bits (69), Expect = 1.4
Identities = 13/39 (33%), Positives = 15/39 (38%)
Frame = +1
Query: 319 WARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRG 435
W + H G HGG G W + H GG H G
Sbjct: 7 WGQPHGGGWGQPHGGGWGQPHGGGWGQPHGGGWGQPHGG 45
Score = 31.9 bits (69), Expect = 1.4
Identities = 13/39 (33%), Positives = 15/39 (38%)
Frame = +1
Query: 319 WARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRG 435
W + H G HGG G W + H GG H G
Sbjct: 15 WGQPHGGGWGQPHGGGWGQPHGGGWGQPHGGGWGQPHGG 53
Score = 31.9 bits (69), Expect = 1.4
Identities = 13/39 (33%), Positives = 15/39 (38%)
Frame = +1
Query: 319 WARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRG 435
W + H G HGG G W + H GG H G
Sbjct: 23 WGQPHGGGWGQPHGGGWGQPHGGGWGQPHGGGWGQPHGG 61
Score = 31.9 bits (69), Expect = 1.4
Identities = 13/39 (33%), Positives = 15/39 (38%)
Frame = +1
Query: 319 WARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRG 435
W + H G HGG G W + H GG H G
Sbjct: 31 WGQPHGGGWGQPHGGGWGQPHGGGWGQPHGGGWGQPHGG 69
Score = 31.9 bits (69), Expect = 1.4
Identities = 13/39 (33%), Positives = 15/39 (38%)
Frame = +1
Query: 319 WARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRG 435
W + H G HGG G W + H GG H G
Sbjct: 39 WGQPHGGGWGQPHGGGWGQPHGGGWGQPHGGGWGQPHGG 77
Score = 31.9 bits (69), Expect = 1.4
Identities = 13/39 (33%), Positives = 15/39 (38%)
Frame = +1
Query: 319 WARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRG 435
W + H G HGG G W + H GG H G
Sbjct: 47 WGQPHGGGWGQPHGGGWGQPHGGGWGQPHGGGWGQPHGG 85
Score = 31.9 bits (69), Expect = 1.4
Identities = 13/39 (33%), Positives = 15/39 (38%)
Frame = +1
Query: 319 WARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRG 435
W + H G HGG G W + H GG H G
Sbjct: 55 WGQPHGGGWGQPHGGGWGQPHGGGWGQPHGGGWGQPHGG 93
>S79978-1|AAB35416.1| 89|Homo sapiens prion protein protein.
Length = 89
Score = 31.9 bits (69), Expect = 1.4
Identities = 13/39 (33%), Positives = 15/39 (38%)
Frame = +1
Query: 319 WARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRG 435
W + H G HGG G W + H GG H G
Sbjct: 7 WGQPHGGGWGQPHGGGWGQPHGGGWGQPHGGGWGQPHGG 45
Score = 31.9 bits (69), Expect = 1.4
Identities = 13/39 (33%), Positives = 15/39 (38%)
Frame = +1
Query: 319 WARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRG 435
W + H G HGG G W + H GG H G
Sbjct: 15 WGQPHGGGWGQPHGGGWGQPHGGGWGQPHGGGWGQPHGG 53
Score = 31.9 bits (69), Expect = 1.4
Identities = 13/39 (33%), Positives = 15/39 (38%)
Frame = +1
Query: 319 WARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRG 435
W + H G HGG G W + H GG H G
Sbjct: 23 WGQPHGGGWGQPHGGGWGQPHGGGWGQPHGGGWGQPHGG 61
Score = 31.9 bits (69), Expect = 1.4
Identities = 13/39 (33%), Positives = 15/39 (38%)
Frame = +1
Query: 319 WARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRG 435
W + H G HGG G W + H GG H G
Sbjct: 31 WGQPHGGGWGQPHGGGWGQPHGGGWGQPHGGGWGQPHGG 69
Score = 31.9 bits (69), Expect = 1.4
Identities = 13/39 (33%), Positives = 15/39 (38%)
Frame = +1
Query: 319 WARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRG 435
W + H G HGG G W + H GG H G
Sbjct: 39 WGQPHGGGWGQPHGGGWGQPHGGGWGQPHGGGWGQPHGG 77
Score = 31.9 bits (69), Expect = 1.4
Identities = 13/39 (33%), Positives = 15/39 (38%)
Frame = +1
Query: 319 WARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRG 435
W + H G HGG G W + H GG H G
Sbjct: 47 WGQPHGGGWGQPHGGGWGQPHGGGWGQPHGGGWGQPHGG 85
>AY458651-1|AAR21603.1| 277|Homo sapiens prion protein protein.
Length = 277
Score = 31.9 bits (69), Expect = 1.4
Identities = 13/39 (33%), Positives = 15/39 (38%)
Frame = +1
Query: 319 WARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRG 435
W + H G HGG G W + H GG H G
Sbjct: 57 WGQPHGGGWGQPHGGGWGQPHGGGWGQPHGGGWGQPHGG 95
Score = 31.9 bits (69), Expect = 1.4
Identities = 13/39 (33%), Positives = 15/39 (38%)
Frame = +1
Query: 319 WARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRG 435
W + H G HGG G W + H GG H G
Sbjct: 65 WGQPHGGGWGQPHGGGWGQPHGGGWGQPHGGGWGQPHGG 103
Score = 31.9 bits (69), Expect = 1.4
Identities = 13/39 (33%), Positives = 15/39 (38%)
Frame = +1
Query: 319 WARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRG 435
W + H G HGG G W + H GG H G
Sbjct: 73 WGQPHGGGWGQPHGGGWGQPHGGGWGQPHGGGWGQPHGG 111
>AF085477-1|AAC62750.2| 285|Homo sapiens prion protein precursor
protein.
Length = 285
Score = 31.9 bits (69), Expect = 1.4
Identities = 13/39 (33%), Positives = 15/39 (38%)
Frame = +1
Query: 319 WARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRG 435
W + H G HGG G W + H GG H G
Sbjct: 57 WGQPHGGGWGQPHGGGWGQPHGGGWGQPHGGGWGQPHGG 95
Score = 31.9 bits (69), Expect = 1.4
Identities = 13/39 (33%), Positives = 15/39 (38%)
Frame = +1
Query: 319 WARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRG 435
W + H G HGG G W + H GG H G
Sbjct: 65 WGQPHGGGWGQPHGGGWGQPHGGGWGQPHGGGWGQPHGG 103
Score = 31.9 bits (69), Expect = 1.4
Identities = 13/39 (33%), Positives = 15/39 (38%)
Frame = +1
Query: 319 WARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRG 435
W + H G HGG G W + H GG H G
Sbjct: 73 WGQPHGGGWGQPHGGGWGQPHGGGWGQPHGGGWGQPHGG 111
Score = 31.9 bits (69), Expect = 1.4
Identities = 13/39 (33%), Positives = 15/39 (38%)
Frame = +1
Query: 319 WARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRG 435
W + H G HGG G W + H GG H G
Sbjct: 81 WGQPHGGGWGQPHGGGWGQPHGGGWGQPHGGGWGQPHGG 119
>Y13247-1|CAA73697.1| 940|Homo sapiens FB19 protein protein.
Length = 940
Score = 30.7 bits (66), Expect = 3.2
Identities = 21/62 (33%), Positives = 28/62 (45%), Gaps = 3/62 (4%)
Frame = +1
Query: 328 GHNGRVSHDHGGHQGH-VTNVHWARGHN--GGVSHDHRGYTRSLGNNYRARYYDGRISND 498
GH HGG GH + +V RGH+ G H+HRG+ R +DG +
Sbjct: 844 GHRPHEGPGHGGPHGHRLHDVPGHRGHDHRGQPPHEHRGHDGPGHGGGGHRGHDG--GHS 901
Query: 499 HG 504
HG
Sbjct: 902 HG 903
>BX248507-1|CAI18567.1| 940|Homo sapiens protein phosphatase 1,
regulatory subunit 10 protein.
Length = 940
Score = 29.9 bits (64), Expect = 5.5
Identities = 19/62 (30%), Positives = 24/62 (38%), Gaps = 3/62 (4%)
Frame = +1
Query: 328 GHNGRVSHDHGG---HQGHVTNVHWARGHNGGVSHDHRGYTRSLGNNYRARYYDGRISND 498
GH HGG H+ H H H G H+HRG+ R +DG +
Sbjct: 844 GHRPHEGPGHGGPHGHRPHDVPGHRGHDHRGPPPHEHRGHDGPGHGGGGHRGHDG--GHS 901
Query: 499 HG 504
HG
Sbjct: 902 HG 903
>BX119957-5|CAM25909.1| 940|Homo sapiens protein phosphatase 1
regulatory subunit 10 protein.
Length = 940
Score = 29.9 bits (64), Expect = 5.5
Identities = 19/62 (30%), Positives = 24/62 (38%), Gaps = 3/62 (4%)
Frame = +1
Query: 328 GHNGRVSHDHGG---HQGHVTNVHWARGHNGGVSHDHRGYTRSLGNNYRARYYDGRISND 498
GH HGG H+ H H H G H+HRG+ R +DG +
Sbjct: 844 GHRPHEGPGHGGPHGHRPHDVPGHRGHDHRGPPPHEHRGHDGPGHGGGGHRGHDG--GHS 901
Query: 499 HG 504
HG
Sbjct: 902 HG 903
>BA000025-74|BAB63324.1| 940|Homo sapiens FB19 protein.
Length = 940
Score = 29.9 bits (64), Expect = 5.5
Identities = 19/62 (30%), Positives = 24/62 (38%), Gaps = 3/62 (4%)
Frame = +1
Query: 328 GHNGRVSHDHGG---HQGHVTNVHWARGHNGGVSHDHRGYTRSLGNNYRARYYDGRISND 498
GH HGG H+ H H H G H+HRG+ R +DG +
Sbjct: 844 GHRPHEGPGHGGPHGHRPHDVPGHRGHDHRGPPPHEHRGHDGPGHGGGGHRGHDG--GHS 901
Query: 499 HG 504
HG
Sbjct: 902 HG 903
>AL662825-9|CAI17838.1| 940|Homo sapiens protein phosphatase 1,
regulatory subunit 10 protein.
Length = 940
Score = 29.9 bits (64), Expect = 5.5
Identities = 19/62 (30%), Positives = 24/62 (38%), Gaps = 3/62 (4%)
Frame = +1
Query: 328 GHNGRVSHDHGG---HQGHVTNVHWARGHNGGVSHDHRGYTRSLGNNYRARYYDGRISND 498
GH HGG H+ H H H G H+HRG+ R +DG +
Sbjct: 844 GHRPHEGPGHGGPHGHRPHDVPGHRGHDHRGPPPHEHRGHDGPGHGGGGHRGHDG--GHS 901
Query: 499 HG 504
HG
Sbjct: 902 HG 903
>AL662800-9|CAI18160.1| 940|Homo sapiens protein phosphatase 1,
regulatory subunit 10 protein.
Length = 940
Score = 29.9 bits (64), Expect = 5.5
Identities = 19/62 (30%), Positives = 24/62 (38%), Gaps = 3/62 (4%)
Frame = +1
Query: 328 GHNGRVSHDHGG---HQGHVTNVHWARGHNGGVSHDHRGYTRSLGNNYRARYYDGRISND 498
GH HGG H+ H H H G H+HRG+ R +DG +
Sbjct: 844 GHRPHEGPGHGGPHGHRPHDVPGHRGHDHRGPPPHEHRGHDGPGHGGGGHRGHDG--GHS 901
Query: 499 HG 504
HG
Sbjct: 902 HG 903
>AJ544537-1|CAD67521.1| 940|Homo sapiens protein phospahatase nuclear
targeting subunit protein.
Length = 940
Score = 29.9 bits (64), Expect = 5.5
Identities = 19/62 (30%), Positives = 24/62 (38%), Gaps = 3/62 (4%)
Frame = +1
Query: 328 GHNGRVSHDHGG---HQGHVTNVHWARGHNGGVSHDHRGYTRSLGNNYRARYYDGRISND 498
GH HGG H+ H H H G H+HRG+ R +DG +
Sbjct: 844 GHRPHEGPGHGGPHGHRPHDVPGHRGHDHRGPPPHEHRGHDGPGHGGGGHRGHDG--GHS 901
Query: 499 HG 504
HG
Sbjct: 902 HG 903
>AB202094-1|BAE78613.1| 940|Homo sapiens protein phosphatase 1,
regulatory subunit 10 protein.
Length = 940
Score = 29.9 bits (64), Expect = 5.5
Identities = 19/62 (30%), Positives = 24/62 (38%), Gaps = 3/62 (4%)
Frame = +1
Query: 328 GHNGRVSHDHGG---HQGHVTNVHWARGHNGGVSHDHRGYTRSLGNNYRARYYDGRISND 498
GH HGG H+ H H H G H+HRG+ R +DG +
Sbjct: 844 GHRPHEGPGHGGPHGHRPHDVPGHRGHDHRGPPPHEHRGHDGPGHGGGGHRGHDG--GHS 901
Query: 499 HG 504
HG
Sbjct: 902 HG 903
>AB103603-1|BAF31264.1| 940|Homo sapiens FB19 protein protein.
Length = 940
Score = 29.9 bits (64), Expect = 5.5
Identities = 19/62 (30%), Positives = 24/62 (38%), Gaps = 3/62 (4%)
Frame = +1
Query: 328 GHNGRVSHDHGG---HQGHVTNVHWARGHNGGVSHDHRGYTRSLGNNYRARYYDGRISND 498
GH HGG H+ H H H G H+HRG+ R +DG +
Sbjct: 844 GHRPHEGPGHGGPHGHRPHDVPGHRGHDHRGPPPHEHRGHDGPGHGGGGHRGHDG--GHS 901
Query: 499 HG 504
HG
Sbjct: 902 HG 903
>AB088097-1|BAC54929.1| 940|Homo sapiens protein phosphatase 1,
regulatory subunit 10 protein.
Length = 940
Score = 29.9 bits (64), Expect = 5.5
Identities = 19/62 (30%), Positives = 24/62 (38%), Gaps = 3/62 (4%)
Frame = +1
Query: 328 GHNGRVSHDHGG---HQGHVTNVHWARGHNGGVSHDHRGYTRSLGNNYRARYYDGRISND 498
GH HGG H+ H H H G H+HRG+ R +DG +
Sbjct: 844 GHRPHEGPGHGGPHGHRPHDVPGHRGHDHRGPPPHEHRGHDGPGHGGGGHRGHDG--GHS 901
Query: 499 HG 504
HG
Sbjct: 902 HG 903
>AY083269-1|AAL89527.1| 352|Homo sapiens transcription factor
mammalian MafA protein.
Length = 352
Score = 29.5 bits (63), Expect = 7.3
Identities = 12/35 (34%), Positives = 14/35 (40%)
Frame = +1
Query: 328 GHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHR 432
G + H H H H + H GH GG H R
Sbjct: 187 GAHHAAHHHHAAHHHHHHHHHGGAGHGGGAGHHVR 221
>AK128621-1|BAC87535.1| 136|Homo sapiens protein ( Homo sapiens
cDNA FLJ46780 fis, clone TRACH3027681. ).
Length = 136
Score = 29.5 bits (63), Expect = 7.3
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +1
Query: 25 LLMTLVNLVNYISM*NPHVEDVIWLFFYIL 114
+++TL NL N I +PH + +I++ FY L
Sbjct: 16 MIITLHNLTNLIYAADPHGDGIIFILFYYL 45
>AB086960-1|BAC20389.1| 352|Homo sapiens pancreatic beta-cell
specific transcriptional activator protein.
Length = 352
Score = 29.5 bits (63), Expect = 7.3
Identities = 12/35 (34%), Positives = 14/35 (40%)
Frame = +1
Query: 328 GHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHR 432
G + H H H H + H GH GG H R
Sbjct: 187 GAHHAAHHHHAAHHHHHHHHHGGAGHGGGAGHHVR 221
>BC060860-1|AAH60860.2| 518|Homo sapiens family with sequence
similarity 98, member A protein.
Length = 518
Score = 29.1 bits (62), Expect = 9.7
Identities = 18/52 (34%), Positives = 22/52 (42%)
Frame = +1
Query: 328 GHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRGYTRSLGNNYRARYYDG 483
G G +GG GH RG GG H RG R GN ++ + DG
Sbjct: 339 GRGGYEHSSYGGRGGHEQG--GGRGGRGGYDHGGRGGGR--GNKHQGGWTDG 386
Score = 29.1 bits (62), Expect = 9.7
Identities = 14/32 (43%), Positives = 16/32 (50%), Gaps = 3/32 (9%)
Frame = +1
Query: 328 GHNGRVSHDHGGHQGHVTNVH---WARGHNGG 414
G GR +DHGG G N H W G +GG
Sbjct: 359 GRGGRGGYDHGGRGGGRGNKHQGGWTDGGSGG 390
>AK074867-1|BAC11255.1| 519|Homo sapiens protein ( Homo sapiens
cDNA FLJ90386 fis, clone NT2RP2005378, weakly similar to
GLYCINE-RICH CELL WALL STRUCTURAL PROTEIN 1.8 PRECURSOR.
).
Length = 519
Score = 29.1 bits (62), Expect = 9.7
Identities = 18/52 (34%), Positives = 22/52 (42%)
Frame = +1
Query: 328 GHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRGYTRSLGNNYRARYYDG 483
G G +GG GH RG GG H RG R GN ++ + DG
Sbjct: 340 GRGGYEHSSYGGRGGHEQG--GGRGGRGGYDHGGRGGGR--GNKHQGGWTDG 387
Score = 29.1 bits (62), Expect = 9.7
Identities = 14/32 (43%), Positives = 16/32 (50%), Gaps = 3/32 (9%)
Frame = +1
Query: 328 GHNGRVSHDHGGHQGHVTNVH---WARGHNGG 414
G GR +DHGG G N H W G +GG
Sbjct: 360 GRGGRGGYDHGGRGGGRGNKHQGGWTDGGSGG 391
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 44,104,269
Number of Sequences: 237096
Number of extensions: 708600
Number of successful extensions: 6137
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 5700
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6081
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4876707572
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -