Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmmt10c10
         (675 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-526|AAF47697.2|  420|Drosophila melanogaster CG9969-PA ...    31   1.4  
AE014134-1389|AAF52597.3| 2898|Drosophila melanogaster CG7466-PA...    29   4.4  

>AE014296-526|AAF47697.2|  420|Drosophila melanogaster CG9969-PA
           protein.
          Length = 420

 Score = 31.1 bits (67), Expect = 1.4
 Identities = 15/51 (29%), Positives = 27/51 (52%)
 Frame = -1

Query: 513 FTNFSMSVCCLVALICTMSIGVTRLMSISLSKYTLYSIGVHCTFVLYVYDG 361
           FT F +S+      +  MS+G+    SI++ + T+Y +      V+Y Y+G
Sbjct: 294 FTQFLLSLFNWGLALFQMSVGLGNNSSITMIRMTMYLVAAGYQIVVYCYNG 344


>AE014134-1389|AAF52597.3| 2898|Drosophila melanogaster CG7466-PA
           protein.
          Length = 2898

 Score = 29.5 bits (63), Expect = 4.4
 Identities = 11/23 (47%), Positives = 17/23 (73%), Gaps = 1/23 (4%)
 Frame = -1

Query: 414 TLYSIGVHCTF-VLYVYDGDTHN 349
           T +S+G  C++  +YVYDGD+ N
Sbjct: 75  TFHSMGTECSYDYIYVYDGDSFN 97


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,975,245
Number of Sequences: 53049
Number of extensions: 522637
Number of successful extensions: 1137
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1091
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1131
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2930645700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)