Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmmt10c04
         (263 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118386-1|AAM48415.1|  361|Drosophila melanogaster RE31658p pro...    26   8.3  
AL138972-9|CAB72292.1|  361|Drosophila melanogaster EG:BACR25B3....    26   8.3  
AF233288-1|AAF43418.1|  361|Drosophila melanogaster WDS protein.       26   8.3  
AE014298-414|AAF45791.1|  361|Drosophila melanogaster CG17437-PA...    26   8.3  

>AY118386-1|AAM48415.1|  361|Drosophila melanogaster RE31658p
           protein.
          Length = 361

 Score = 25.8 bits (54), Expect = 8.3
 Identities = 10/16 (62%), Positives = 13/16 (81%), Gaps = 2/16 (12%)
 Frame = +1

Query: 160 NYIGCCNYN--SNLVV 201
           NY+ CCN+N  SNL+V
Sbjct: 157 NYVFCCNFNPQSNLIV 172


>AL138972-9|CAB72292.1|  361|Drosophila melanogaster EG:BACR25B3.7
           protein.
          Length = 361

 Score = 25.8 bits (54), Expect = 8.3
 Identities = 10/16 (62%), Positives = 13/16 (81%), Gaps = 2/16 (12%)
 Frame = +1

Query: 160 NYIGCCNYN--SNLVV 201
           NY+ CCN+N  SNL+V
Sbjct: 157 NYVFCCNFNPQSNLIV 172


>AF233288-1|AAF43418.1|  361|Drosophila melanogaster WDS protein.
          Length = 361

 Score = 25.8 bits (54), Expect = 8.3
 Identities = 10/16 (62%), Positives = 13/16 (81%), Gaps = 2/16 (12%)
 Frame = +1

Query: 160 NYIGCCNYN--SNLVV 201
           NY+ CCN+N  SNL+V
Sbjct: 157 NYVFCCNFNPQSNLIV 172


>AE014298-414|AAF45791.1|  361|Drosophila melanogaster CG17437-PA
           protein.
          Length = 361

 Score = 25.8 bits (54), Expect = 8.3
 Identities = 10/16 (62%), Positives = 13/16 (81%), Gaps = 2/16 (12%)
 Frame = +1

Query: 160 NYIGCCNYN--SNLVV 201
           NY+ CCN+N  SNL+V
Sbjct: 157 NYVFCCNFNPQSNLIV 172


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,591,192
Number of Sequences: 53049
Number of extensions: 150164
Number of successful extensions: 231
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 231
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 231
length of database: 24,988,368
effective HSP length: 66
effective length of database: 21,487,134
effective search space used: 451229814
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)