Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt10b15
(676 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC150181-1|AAI50182.1| 1024|Homo sapiens thyrotropin-releasing h... 34 0.53
BC142706-1|AAI42707.1| 1024|Homo sapiens thyrotropin-releasing h... 34 0.53
AY358765-1|AAQ89125.1| 1024|Homo sapiens TRHDE protein. 34 0.53
AF126372-1|AAF13141.1| 1024|Homo sapiens thyrotropin-releasing h... 34 0.53
BC036522-1|AAH36522.1| 780|Homo sapiens cation channel, sperm a... 33 1.2
BC032950-1|AAH32950.1| 780|Homo sapiens cation channel, sperm a... 33 1.2
AF407333-1|AAL14105.1| 780|Homo sapiens sperm ion channel protein. 33 1.2
BC109023-1|AAI09024.1| 990|Homo sapiens laeverin protein. 30 6.5
BC109022-1|AAI09023.1| 990|Homo sapiens laeverin protein. 30 6.5
BC060869-1|AAH60869.1| 979|Homo sapiens FLJ90650 protein protein. 30 6.5
AY560010-1|AAS66719.1| 990|Homo sapiens laeverin protein. 30 6.5
AK075131-1|BAC11422.1| 507|Homo sapiens protein ( Homo sapiens ... 30 6.5
>BC150181-1|AAI50182.1| 1024|Homo sapiens thyrotropin-releasing
hormone degrading enzyme protein.
Length = 1024
Score = 33.9 bits (74), Expect = 0.53
Identities = 29/129 (22%), Positives = 57/129 (44%), Gaps = 4/129 (3%)
Frame = -2
Query: 660 SEKVVMLNVAGCTTDQASLNRFLDAIVSGNDDIRPQDYNAALTSAITSNEINTLRAFQWL 481
SEK ++L C+ D+ LNR L+ +S N ++ + + N A+++
Sbjct: 883 SEKKILLEALTCSDDRNLLNRLLN--LSLNSEVVLDQDAIDVIIHVARNPHGRDLAWKFF 940
Query: 480 RNNVDQATRTLGSV----STILNTIIGRLLNEEQINEVSNWLTANQNTLGATYSTALRAI 313
R+ G S +++ + L E ++ E+ N++ A++S RA+
Sbjct: 941 RDKWKILNTRYGEALFMNSKLISGVTEFLNTEGELKELKNFMKNYDGVAAASFS---RAV 997
Query: 312 ETTRSNLVW 286
ET +N+ W
Sbjct: 998 ETVEANVRW 1006
>BC142706-1|AAI42707.1| 1024|Homo sapiens thyrotropin-releasing
hormone degrading enzyme protein.
Length = 1024
Score = 33.9 bits (74), Expect = 0.53
Identities = 29/129 (22%), Positives = 57/129 (44%), Gaps = 4/129 (3%)
Frame = -2
Query: 660 SEKVVMLNVAGCTTDQASLNRFLDAIVSGNDDIRPQDYNAALTSAITSNEINTLRAFQWL 481
SEK ++L C+ D+ LNR L+ +S N ++ + + N A+++
Sbjct: 883 SEKKILLEALTCSDDRNLLNRLLN--LSLNSEVVLDQDAIDVIIHVARNPHGRDLAWKFF 940
Query: 480 RNNVDQATRTLGSV----STILNTIIGRLLNEEQINEVSNWLTANQNTLGATYSTALRAI 313
R+ G S +++ + L E ++ E+ N++ A++S RA+
Sbjct: 941 RDKWKILNTRYGEALFMNSKLISGVTEFLNTEGELKELKNFMKNYDGVAAASFS---RAV 997
Query: 312 ETTRSNLVW 286
ET +N+ W
Sbjct: 998 ETVEANVRW 1006
>AY358765-1|AAQ89125.1| 1024|Homo sapiens TRHDE protein.
Length = 1024
Score = 33.9 bits (74), Expect = 0.53
Identities = 29/129 (22%), Positives = 57/129 (44%), Gaps = 4/129 (3%)
Frame = -2
Query: 660 SEKVVMLNVAGCTTDQASLNRFLDAIVSGNDDIRPQDYNAALTSAITSNEINTLRAFQWL 481
SEK ++L C+ D+ LNR L+ +S N ++ + + N A+++
Sbjct: 883 SEKKILLEALTCSDDRNLLNRLLN--LSLNSEVVLDQDAIDVIIHVARNPHGRDLAWKFF 940
Query: 480 RNNVDQATRTLGSV----STILNTIIGRLLNEEQINEVSNWLTANQNTLGATYSTALRAI 313
R+ G S +++ + L E ++ E+ N++ A++S RA+
Sbjct: 941 RDKWKILNTRYGEALFMYSKLISGVTEFLNTEGELKELKNFMKNYDGVAAASFS---RAV 997
Query: 312 ETTRSNLVW 286
ET +N+ W
Sbjct: 998 ETVEANVRW 1006
>AF126372-1|AAF13141.1| 1024|Homo sapiens thyrotropin-releasing
hormone degrading ectoenzyme protein.
Length = 1024
Score = 33.9 bits (74), Expect = 0.53
Identities = 29/129 (22%), Positives = 57/129 (44%), Gaps = 4/129 (3%)
Frame = -2
Query: 660 SEKVVMLNVAGCTTDQASLNRFLDAIVSGNDDIRPQDYNAALTSAITSNEINTLRAFQWL 481
SEK ++L C+ D+ LNR L+ +S N ++ + + N A+++
Sbjct: 883 SEKKILLEALTCSDDRNLLNRLLN--LSLNSEVVLDQDAIDVIIHVARNPHGRDLAWKFF 940
Query: 480 RNNVDQATRTLGSV----STILNTIIGRLLNEEQINEVSNWLTANQNTLGATYSTALRAI 313
R+ G S +++ + L E ++ E+ N++ A++S RA+
Sbjct: 941 RDKWKILNTRYGEALFMNSKLISGVTEFLNTEGELKELKNFMKNYDGVAAASFS---RAV 997
Query: 312 ETTRSNLVW 286
ET +N+ W
Sbjct: 998 ETVEANVRW 1006
>BC036522-1|AAH36522.1| 780|Homo sapiens cation channel, sperm
associated 1 protein.
Length = 780
Score = 32.7 bits (71), Expect = 1.2
Identities = 31/143 (21%), Positives = 51/143 (35%), Gaps = 1/143 (0%)
Frame = -1
Query: 505 HSESFPMAQEQR*PGDQNPRQRFHDLEHNNWTSPQRGTDK*GFELVDGQPKHPGSHIQHG 326
+SESF ++ G Q+ + H + H W + G+ +H +H QHG
Sbjct: 187 YSESFHHSEASHLSGLQHDESQHHQVPHRGWPHHHQVHHH-------GRSRHHEAH-QHG 238
Query: 325 ATSYRDHAVEPRLVTAENFR-IHELLRVRLRGGCH*GDHRGTAYCSPDRPTNRSSSCHPC 149
+ + + P R I + H GDH + Y D P + H
Sbjct: 239 KSPHHGETISPHSSVGSYQRGISDY-----HSEYHQGDHHPSEYHHGDHPHHTQHHYHQT 293
Query: 148 TRFSERRSPKLYHTDHHFSCQFG 80
R + + +H +H S G
Sbjct: 294 HRHRDYHQHQDHHGAYHSSYLHG 316
>BC032950-1|AAH32950.1| 780|Homo sapiens cation channel, sperm
associated 1 protein.
Length = 780
Score = 32.7 bits (71), Expect = 1.2
Identities = 31/143 (21%), Positives = 51/143 (35%), Gaps = 1/143 (0%)
Frame = -1
Query: 505 HSESFPMAQEQR*PGDQNPRQRFHDLEHNNWTSPQRGTDK*GFELVDGQPKHPGSHIQHG 326
+SESF ++ G Q+ + H + H W + G+ +H +H QHG
Sbjct: 187 YSESFHHSEASHLSGLQHDESQHHQVPHRGWPHHHQVHHH-------GRSRHHEAH-QHG 238
Query: 325 ATSYRDHAVEPRLVTAENFR-IHELLRVRLRGGCH*GDHRGTAYCSPDRPTNRSSSCHPC 149
+ + + P R I + H GDH + Y D P + H
Sbjct: 239 KSPHHGETISPHSSVGSYQRGISDY-----HSEYHQGDHHPSEYHHGDHPHHTQHHYHQT 293
Query: 148 TRFSERRSPKLYHTDHHFSCQFG 80
R + + +H +H S G
Sbjct: 294 HRHRDYHQHQDHHGAYHSSYLHG 316
>AF407333-1|AAL14105.1| 780|Homo sapiens sperm ion channel protein.
Length = 780
Score = 32.7 bits (71), Expect = 1.2
Identities = 31/143 (21%), Positives = 51/143 (35%), Gaps = 1/143 (0%)
Frame = -1
Query: 505 HSESFPMAQEQR*PGDQNPRQRFHDLEHNNWTSPQRGTDK*GFELVDGQPKHPGSHIQHG 326
+SESF ++ G Q+ + H + H W + G+ +H +H QHG
Sbjct: 187 YSESFHHSEASHLSGLQHDESQHHQVPHRGWPHHHQVHHH-------GRSRHHEAH-QHG 238
Query: 325 ATSYRDHAVEPRLVTAENFR-IHELLRVRLRGGCH*GDHRGTAYCSPDRPTNRSSSCHPC 149
+ + + P R I + H GDH + Y D P + H
Sbjct: 239 KSPHHGETISPHSSVGSYQRGISDY-----HSEYHQGDHHPSEYHHGDHPHHTQHHYHQT 293
Query: 148 TRFSERRSPKLYHTDHHFSCQFG 80
R + + +H +H S G
Sbjct: 294 HRHRDYHQHQDHHGAYHSSYLHG 316
>BC109023-1|AAI09024.1| 990|Homo sapiens laeverin protein.
Length = 990
Score = 30.3 bits (65), Expect = 6.5
Identities = 25/100 (25%), Positives = 46/100 (46%), Gaps = 2/100 (2%)
Frame = -2
Query: 657 EKVVMLNVAGCTTDQASLNRFLDAIVSGNDDIRPQDYNAALTSAITSNEINTLRAFQWLR 478
EK+ + C+ D LNR+++ +S + N + + S+E+ A +L
Sbjct: 854 EKIQLAYAMSCSKDPWILNRYMEYAIS-TSPFTSNETN--IIEVVASSEVGRYVAKDFLV 910
Query: 477 NNVDQATRTLGSVSTI-LNTIIGRLLNEE-QINEVSNWLT 364
NN ++ G+ S I L IGR + + QI E+ + +
Sbjct: 911 NNWQAVSKRYGTQSLINLIYTIGRTVTTDLQIVELQQFFS 950
>BC109022-1|AAI09023.1| 990|Homo sapiens laeverin protein.
Length = 990
Score = 30.3 bits (65), Expect = 6.5
Identities = 25/100 (25%), Positives = 46/100 (46%), Gaps = 2/100 (2%)
Frame = -2
Query: 657 EKVVMLNVAGCTTDQASLNRFLDAIVSGNDDIRPQDYNAALTSAITSNEINTLRAFQWLR 478
EK+ + C+ D LNR+++ +S + N + + S+E+ A +L
Sbjct: 854 EKIQLAYAMSCSKDPWILNRYMEYAIS-TSPFTSNETN--IIEVVASSEVGRYVAKDFLV 910
Query: 477 NNVDQATRTLGSVSTI-LNTIIGRLLNEE-QINEVSNWLT 364
NN ++ G+ S I L IGR + + QI E+ + +
Sbjct: 911 NNWQAVSKRYGTQSLINLIYTIGRTVTTDLQIVELQQFFS 950
>BC060869-1|AAH60869.1| 979|Homo sapiens FLJ90650 protein protein.
Length = 979
Score = 30.3 bits (65), Expect = 6.5
Identities = 25/100 (25%), Positives = 46/100 (46%), Gaps = 2/100 (2%)
Frame = -2
Query: 657 EKVVMLNVAGCTTDQASLNRFLDAIVSGNDDIRPQDYNAALTSAITSNEINTLRAFQWLR 478
EK+ + C+ D LNR+++ +S + N + + S+E+ A +L
Sbjct: 843 EKIQLAYAMSCSKDPWILNRYMEYAIS-TSPFTSNETN--IIEVVASSEVGRYVAKDFLV 899
Query: 477 NNVDQATRTLGSVSTI-LNTIIGRLLNEE-QINEVSNWLT 364
NN ++ G+ S I L IGR + + QI E+ + +
Sbjct: 900 NNWQAVSKRYGTQSLINLIYTIGRTVTTDLQIVELQQFFS 939
>AY560010-1|AAS66719.1| 990|Homo sapiens laeverin protein.
Length = 990
Score = 30.3 bits (65), Expect = 6.5
Identities = 25/100 (25%), Positives = 46/100 (46%), Gaps = 2/100 (2%)
Frame = -2
Query: 657 EKVVMLNVAGCTTDQASLNRFLDAIVSGNDDIRPQDYNAALTSAITSNEINTLRAFQWLR 478
EK+ + C+ D LNR+++ +S + N + + S+E+ A +L
Sbjct: 854 EKIQLAYAMSCSKDPWILNRYMEYAIS-TSPFTSNETN--IIEVVASSEVGRYVAKDFLV 910
Query: 477 NNVDQATRTLGSVSTI-LNTIIGRLLNEE-QINEVSNWLT 364
NN ++ G+ S I L IGR + + QI E+ + +
Sbjct: 911 NNWQAVSKRYGTQSLINLIYTIGRTVTTDLQIVELQQFFS 950
>AK075131-1|BAC11422.1| 507|Homo sapiens protein ( Homo sapiens
cDNA FLJ90650 fis, clone PLACE1004450, weakly similar to
AMINOPEPTIDASE N (EC 3.4.11.2). ).
Length = 507
Score = 30.3 bits (65), Expect = 6.5
Identities = 25/100 (25%), Positives = 46/100 (46%), Gaps = 2/100 (2%)
Frame = -2
Query: 657 EKVVMLNVAGCTTDQASLNRFLDAIVSGNDDIRPQDYNAALTSAITSNEINTLRAFQWLR 478
EK+ + C+ D LNR+++ +S + N + + S+E+ A +L
Sbjct: 371 EKIQLAYAMSCSKDPWILNRYMEYAIS-TSPFTSNETN--IIEVVASSEVGRYVAKDFLV 427
Query: 477 NNVDQATRTLGSVSTI-LNTIIGRLLNEE-QINEVSNWLT 364
NN ++ G+ S I L IGR + + QI E+ + +
Sbjct: 428 NNWQAVSKRYGTQSLINLIYTIGRTVTTDLQIVELQQFFS 467
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,009,926
Number of Sequences: 237096
Number of extensions: 1801695
Number of successful extensions: 4365
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 4195
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4359
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7615267504
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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