Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmmt10b06
         (659 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

K03195-1|AAA52571.1|  492|Homo sapiens SGLT1 protein.                  31   4.8  
BC121804-1|AAI21805.1|  492|Homo sapiens solute carrier family 2...    31   4.8  
BC118590-1|AAI18591.1|  492|Homo sapiens solute carrier family 2...    31   4.8  
AF070544-1|AAC28635.1|  343|Homo sapiens glucose transporter gly...    31   4.8  
AB208987-1|BAD92224.1|  517|Homo sapiens solute carrier family 2...    31   4.8  

>K03195-1|AAA52571.1|  492|Homo sapiens SGLT1 protein.
          Length = 492

 Score = 30.7 bits (66), Expect = 4.8
 Identities = 28/114 (24%), Positives = 45/114 (39%)
 Frame = -3

Query: 459 YISITLLTGFTMAISSGPMILSLAISGELISLRFRSFSLCVTVLIFKSLNGTVMKFSPFT 280
           Y+SI  + GF      GP  +   I  EL S   R  ++ V      + N  V     + 
Sbjct: 366 YLSIVAIFGFVAFFEVGPGPIPWFIVAELFSQGPRPAAIAVAGFSNWTSNFIVGMCFQYV 425

Query: 279 FRYFGLHGVFFIYGXXXXXXXXXXXXXLPETKDRSLQEIADSMNEKKRNVAEET 118
            +  G + VF I+              +PETK R+  EIA    +   + +++T
Sbjct: 426 EQLCGPY-VFIIFTVLLVLFFIFTYFKVPETKGRTFDEIASGFRQGGASQSDKT 478


>BC121804-1|AAI21805.1|  492|Homo sapiens solute carrier family 2
           (facilitated glucose transporter), member 1 protein.
          Length = 492

 Score = 30.7 bits (66), Expect = 4.8
 Identities = 28/114 (24%), Positives = 45/114 (39%)
 Frame = -3

Query: 459 YISITLLTGFTMAISSGPMILSLAISGELISLRFRSFSLCVTVLIFKSLNGTVMKFSPFT 280
           Y+SI  + GF      GP  +   I  EL S   R  ++ V      + N  V     + 
Sbjct: 366 YLSIVAIFGFVAFFEVGPGPIPWFIVAELFSQGPRPAAIAVAGFSNWTSNFIVGMCFQYV 425

Query: 279 FRYFGLHGVFFIYGXXXXXXXXXXXXXLPETKDRSLQEIADSMNEKKRNVAEET 118
            +  G + VF I+              +PETK R+  EIA    +   + +++T
Sbjct: 426 EQLCGPY-VFIIFTVLLVLFFIFTYFKVPETKGRTFDEIASGFRQGGASQSDKT 478


>BC118590-1|AAI18591.1|  492|Homo sapiens solute carrier family 2
           (facilitated glucose transporter), member 1 protein.
          Length = 492

 Score = 30.7 bits (66), Expect = 4.8
 Identities = 28/114 (24%), Positives = 45/114 (39%)
 Frame = -3

Query: 459 YISITLLTGFTMAISSGPMILSLAISGELISLRFRSFSLCVTVLIFKSLNGTVMKFSPFT 280
           Y+SI  + GF      GP  +   I  EL S   R  ++ V      + N  V     + 
Sbjct: 366 YLSIVAIFGFVAFFEVGPGPIPWFIVAELFSQGPRPAAIAVAGFSNWTSNFIVGMCFQYV 425

Query: 279 FRYFGLHGVFFIYGXXXXXXXXXXXXXLPETKDRSLQEIADSMNEKKRNVAEET 118
            +  G + VF I+              +PETK R+  EIA    +   + +++T
Sbjct: 426 EQLCGPY-VFIIFTVLLVLFFIFTYFKVPETKGRTFDEIASGFRQGGASQSDKT 478


>AF070544-1|AAC28635.1|  343|Homo sapiens glucose transporter
           glycoprotein protein.
          Length = 343

 Score = 30.7 bits (66), Expect = 4.8
 Identities = 28/114 (24%), Positives = 45/114 (39%)
 Frame = -3

Query: 459 YISITLLTGFTMAISSGPMILSLAISGELISLRFRSFSLCVTVLIFKSLNGTVMKFSPFT 280
           Y+SI  + GF      GP  +   I  EL S   R  ++ V      + N  V     + 
Sbjct: 217 YLSIVAIFGFVAFFEVGPGPIPWFIVAELFSQGPRPAAIAVAGFSNWTSNFIVGMCFQYV 276

Query: 279 FRYFGLHGVFFIYGXXXXXXXXXXXXXLPETKDRSLQEIADSMNEKKRNVAEET 118
            +  G + VF I+              +PETK R+  EIA    +   + +++T
Sbjct: 277 EQLCGPY-VFIIFTVLLVLFFIFTYFKVPETKGRTFDEIASGFRQGGASQSDKT 329


>AB208987-1|BAD92224.1|  517|Homo sapiens solute carrier family 2
           (facilitated glucose transporter), member 1 variant
           protein.
          Length = 517

 Score = 30.7 bits (66), Expect = 4.8
 Identities = 28/114 (24%), Positives = 45/114 (39%)
 Frame = -3

Query: 459 YISITLLTGFTMAISSGPMILSLAISGELISLRFRSFSLCVTVLIFKSLNGTVMKFSPFT 280
           Y+SI  + GF      GP  +   I  EL S   R  ++ V      + N  V     + 
Sbjct: 391 YLSIVAIFGFVAFFEVGPGPIPWFIVAELFSQGPRPAAIAVAGFSNWTSNFIVGMCFQYV 450

Query: 279 FRYFGLHGVFFIYGXXXXXXXXXXXXXLPETKDRSLQEIADSMNEKKRNVAEET 118
            +  G + VF I+              +PETK R+  EIA    +   + +++T
Sbjct: 451 EQLCGPY-VFIIFTVLLVLFFIFTYFKVPETKGRTFDEIASGFRQGGASQSDKT 503


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,289,605
Number of Sequences: 237096
Number of extensions: 1345470
Number of successful extensions: 2197
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2122
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2187
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7422585720
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)