Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt10b02
(587 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z19153-2|CAA79549.1| 493|Caenorhabditis elegans Hypothetical pr... 79 2e-15
Z48055-10|CAA88135.1| 573|Caenorhabditis elegans Hypothetical p... 71 5e-13
Z36282-3|CAA85289.1| 573|Caenorhabditis elegans Hypothetical pr... 71 5e-13
U58737-2|AAM69081.1| 479|Caenorhabditis elegans Hypothetical pr... 71 8e-13
U58737-1|ABC48238.1| 474|Caenorhabditis elegans Hypothetical pr... 71 8e-13
Z48055-1|CAA88134.1| 544|Caenorhabditis elegans Hypothetical pr... 69 2e-12
Z22177-5|CAA80150.1| 576|Caenorhabditis elegans Hypothetical pr... 61 5e-10
AF095787-1|AAC64972.1| 563|Caenorhabditis elegans EAT-4 protein. 61 5e-10
Z82285-3|CAD56246.1| 573|Caenorhabditis elegans Hypothetical pr... 59 2e-09
AF022973-2|AAC25800.2| 527|Caenorhabditis elegans Hypothetical ... 58 5e-09
AF022973-1|AAT81194.1| 513|Caenorhabditis elegans Hypothetical ... 58 5e-09
AF003138-5|AAL77178.1| 488|Caenorhabditis elegans Hypothetical ... 56 1e-08
AF003138-3|AAM15568.1| 504|Caenorhabditis elegans Hypothetical ... 56 1e-08
AF003138-2|AAM15567.1| 546|Caenorhabditis elegans Hypothetical ... 56 1e-08
U58737-3|AAM69082.2| 189|Caenorhabditis elegans Hypothetical pr... 55 4e-08
Z81109-1|CAB03245.1| 485|Caenorhabditis elegans Hypothetical pr... 52 4e-07
L23649-1|AAA27912.1| 568|Caenorhabditis elegans Hypothetical pr... 50 1e-06
Z70037-1|CAA93878.1| 493|Caenorhabditis elegans Hypothetical pr... 46 3e-05
Z83236-1|CAB05777.1| 445|Caenorhabditis elegans Hypothetical pr... 42 3e-04
U41110-1|AAA82415.1| 506|Caenorhabditis elegans Hypothetical pr... 39 0.003
AF022979-9|AAB69904.1| 466|Caenorhabditis elegans Hypothetical ... 39 0.003
Z81470-2|CAB03882.2| 422|Caenorhabditis elegans Hypothetical pr... 38 0.004
AL023845-4|CAA19541.1| 516|Caenorhabditis elegans Hypothetical ... 38 0.005
Z70307-7|CAA94336.2| 531|Caenorhabditis elegans Hypothetical pr... 38 0.007
Z82278-4|CAB05257.2| 487|Caenorhabditis elegans Hypothetical pr... 36 0.028
Z47070-1|CAA87340.1| 516|Caenorhabditis elegans Hypothetical pr... 35 0.037
U64609-8|AAB04605.2| 465|Caenorhabditis elegans Hypothetical pr... 35 0.037
U23521-9|AAC46809.2| 499|Caenorhabditis elegans Hypothetical pr... 33 0.11
AF125971-2|AAN73291.1| 458|Caenorhabditis elegans Hypothetical ... 33 0.15
U64844-11|AAB18311.1| 482|Caenorhabditis elegans Hypothetical p... 33 0.20
Z68317-3|CAA92687.1| 599|Caenorhabditis elegans Hypothetical pr... 32 0.26
AY077615-1|AAL79359.1| 510|Caenorhabditis elegans KSR-2b protein. 30 1.1
AY077614-1|AAL79358.1| 550|Caenorhabditis elegans KSR-2a protein. 30 1.1
AL137227-5|CAB70240.2| 510|Caenorhabditis elegans Hypothetical ... 30 1.1
AL137227-4|CAB70239.2| 550|Caenorhabditis elegans Hypothetical ... 30 1.1
U35250-2|AAB41910.1| 492|Caenorhabditis elegans CeGlt-1 protein. 29 2.4
U35250-1|AAB41909.1| 503|Caenorhabditis elegans CeGlt-2 protein. 29 2.4
Z70310-2|CAA94367.1| 462|Caenorhabditis elegans Hypothetical pr... 28 5.7
AF039710-4|AAD32273.1| 347|Caenorhabditis elegans Serpentine re... 28 5.7
Z73912-1|CAA98145.1| 465|Caenorhabditis elegans Hypothetical pr... 27 7.5
Z14067-1|CAA78450.1| 465|Caenorhabditis elegans putative integr... 27 7.5
Z14066-1|CAA78449.1| 465|Caenorhabditis elegans putative integr... 27 7.5
U64844-10|AAB18310.1| 448|Caenorhabditis elegans Hypothetical p... 27 9.9
AF067942-8|AAG45575.1| 349|Caenorhabditis elegans Serpentine re... 27 9.9
>Z19153-2|CAA79549.1| 493|Caenorhabditis elegans Hypothetical
protein C38C10.2 protein.
Length = 493
Score = 79.4 bits (187), Expect = 2e-15
Identities = 37/135 (27%), Positives = 69/135 (51%), Gaps = 2/135 (1%)
Frame = -1
Query: 530 TKKIMTVANIRRTANTIGMVLSGFFLI--GFCYVDKAWLAVLLLMISFGMHSAVHTGFHI 357
+K I++ N RR A + ++ G FL+ G+C + L ++ + + + GF +
Sbjct: 336 SKGILSTLNTRRAAMLVALIGQGIFLVASGYCGCGQDVLVIIFITCGMAISGLQYAGFVV 395
Query: 356 NQIDLSPNFAGPIMSLGNMVANLTSLLVPVIVSNIVKDDLKNPSRWQIVFLITVSFQFIT 177
N ++++P F+G +M GN ++ L ++ P + S + + + WQ+V +T I
Sbjct: 396 NYLEIAPPFSGTVMGTGNTISALAGIISPAVSSYLTPNGTQ--EEWQMVLWLTAGILTIG 453
Query: 176 NAVFVIFVKGSVQPW 132
+F IF G VQPW
Sbjct: 454 ALLFSIFASGEVQPW 468
>Z48055-10|CAA88135.1| 573|Caenorhabditis elegans Hypothetical
protein K10G9.1 protein.
Length = 573
Score = 71.3 bits (167), Expect = 5e-13
Identities = 41/129 (31%), Positives = 65/129 (50%)
Frame = -1
Query: 518 MTVANIRRTANTIGMVLSGFFLIGFCYVDKAWLAVLLLMISFGMHSAVHTGFHINQIDLS 339
M+ +R++ NT G + L +V +AV L+I+ AV +GF++N D++
Sbjct: 354 MSTEAVRKSVNTFGFTVEAVMLGCLAFVRDPVIAVTFLIIACSGAGAVLSGFNVNHFDIA 413
Query: 338 PNFAGPIMSLGNMVANLTSLLVPVIVSNIVKDDLKNPSRWQIVFLITVSFQFITNAVFVI 159
P A +M + N + + V IV+N + +NP WQ VFL+ +S F+I
Sbjct: 414 PRHAPILMGIANGLGAIAG--VGGIVTNSLT--YQNPDGWQWVFLLAMSIDIFGIIFFLI 469
Query: 158 FVKGSVQPW 132
F KG V PW
Sbjct: 470 FAKGDVLPW 478
>Z36282-3|CAA85289.1| 573|Caenorhabditis elegans Hypothetical
protein K10G9.1 protein.
Length = 573
Score = 71.3 bits (167), Expect = 5e-13
Identities = 41/129 (31%), Positives = 65/129 (50%)
Frame = -1
Query: 518 MTVANIRRTANTIGMVLSGFFLIGFCYVDKAWLAVLLLMISFGMHSAVHTGFHINQIDLS 339
M+ +R++ NT G + L +V +AV L+I+ AV +GF++N D++
Sbjct: 354 MSTEAVRKSVNTFGFTVEAVMLGCLAFVRDPVIAVTFLIIACSGAGAVLSGFNVNHFDIA 413
Query: 338 PNFAGPIMSLGNMVANLTSLLVPVIVSNIVKDDLKNPSRWQIVFLITVSFQFITNAVFVI 159
P A +M + N + + V IV+N + +NP WQ VFL+ +S F+I
Sbjct: 414 PRHAPILMGIANGLGAIAG--VGGIVTNSLT--YQNPDGWQWVFLLAMSIDIFGIIFFLI 469
Query: 158 FVKGSVQPW 132
F KG V PW
Sbjct: 470 FAKGDVLPW 478
>U58737-2|AAM69081.1| 479|Caenorhabditis elegans Hypothetical
protein ZK54.1a protein.
Length = 479
Score = 70.5 bits (165), Expect = 8e-13
Identities = 35/124 (28%), Positives = 60/124 (48%)
Frame = -1
Query: 503 IRRTANTIGMVLSGFFLIGFCYVDKAWLAVLLLMISFGMHSAVHTGFHINQIDLSPNFAG 324
+R+ A +G + FL + L VL IS G+ GF +N +DL+P +AG
Sbjct: 346 VRKMACALGFIGQSVFLFLVMTTSNSLLLVLFFSISIGLGGICWCGFSVNHLDLAPQYAG 405
Query: 323 PIMSLGNMVANLTSLLVPVIVSNIVKDDLKNPSRWQIVFLITVSFQFITNAVFVIFVKGS 144
+M+ N A + + P++V IV++ W ++ I +S + A+F F +
Sbjct: 406 HLMATSNTFATIPGIFGPLLVGAIVQNG--TIGEWNVIMYIIISAYLLGAAIFWKFADAT 463
Query: 143 VQPW 132
+QPW
Sbjct: 464 LQPW 467
>U58737-1|ABC48238.1| 474|Caenorhabditis elegans Hypothetical
protein ZK54.1b protein.
Length = 474
Score = 70.5 bits (165), Expect = 8e-13
Identities = 35/124 (28%), Positives = 60/124 (48%)
Frame = -1
Query: 503 IRRTANTIGMVLSGFFLIGFCYVDKAWLAVLLLMISFGMHSAVHTGFHINQIDLSPNFAG 324
+R+ A +G + FL + L VL IS G+ GF +N +DL+P +AG
Sbjct: 341 VRKMACALGFIGQSVFLFLVMTTSNSLLLVLFFSISIGLGGICWCGFSVNHLDLAPQYAG 400
Query: 323 PIMSLGNMVANLTSLLVPVIVSNIVKDDLKNPSRWQIVFLITVSFQFITNAVFVIFVKGS 144
+M+ N A + + P++V IV++ W ++ I +S + A+F F +
Sbjct: 401 HLMATSNTFATIPGIFGPLLVGAIVQNG--TIGEWNVIMYIIISAYLLGAAIFWKFADAT 458
Query: 143 VQPW 132
+QPW
Sbjct: 459 LQPW 462
>Z48055-1|CAA88134.1| 544|Caenorhabditis elegans Hypothetical
protein T07A5.3 protein.
Length = 544
Score = 69.3 bits (162), Expect = 2e-12
Identities = 43/159 (27%), Positives = 79/159 (49%)
Frame = -1
Query: 518 MTVANIRRTANTIGMVLSGFFLIGFCYVDKAWLAVLLLMISFGMHSAVHTGFHINQIDLS 339
M+ +R++ NT G + L +V +AV L+I+ +V +GF++N D++
Sbjct: 354 MSTEAVRKSVNTFGFTVEAMMLGCLAFVRDPVIAVTCLVIACTGSGSVLSGFNVNHFDIA 413
Query: 338 PNFAGPIMSLGNMVANLTSLLVPVIVSNIVKDDLKNPSRWQIVFLITVSFQFITNAVFVI 159
P +A +M + N + + V +V+N V +NP W+ VFL+ ++ F+I
Sbjct: 414 PRYAPILMGIANGLGAVAG--VGGMVTNTVT--YQNPDGWKWVFLLAMAIDIFGVIFFLI 469
Query: 158 FVKGSVQPWNFHDEERIGTGVEELKSLNDHKNSIKEKEK 42
F KG V PW + E+ T E ++ ++ S+ K +
Sbjct: 470 FAKGDVLPW-AREPEKEETFNEFVRRMSIKVRSLSRKTR 507
>Z22177-5|CAA80150.1| 576|Caenorhabditis elegans Hypothetical
protein ZK512.6 protein.
Length = 576
Score = 61.3 bits (142), Expect = 5e-10
Identities = 32/139 (23%), Positives = 58/139 (41%)
Frame = -1
Query: 530 TKKIMTVANIRRTANTIGMVLSGFFLIGFCYVDKAWLAVLLLMISFGMHSAVHTGFHINQ 351
+ KI++ +R+ N G F++ Y A++ L+ + GM +GF++N
Sbjct: 370 SNKILSTTAVRKIFNCGGFGGEAAFMLIVAYTTSDTTAIMALIAAVGMSGFAISGFNVNH 429
Query: 350 IDLSPNFAGPIMSLGNMVANLTSLLVPVIVSNIVKDDLKNPSRWQIVFLITVSFQFITNA 171
+D++P +A +M N + L L P + W VFL+ F
Sbjct: 430 LDIAPRYAAILMGFSNGIGTLAGLTCPFVTEAFTAHSKHG---WTSVFLLASLIHFTGVT 486
Query: 170 VFVIFVKGSVQPWNFHDEE 114
+ ++ G +Q W EE
Sbjct: 487 FYAVYASGELQEWAEPKEE 505
>AF095787-1|AAC64972.1| 563|Caenorhabditis elegans EAT-4 protein.
Length = 563
Score = 61.3 bits (142), Expect = 5e-10
Identities = 32/139 (23%), Positives = 58/139 (41%)
Frame = -1
Query: 530 TKKIMTVANIRRTANTIGMVLSGFFLIGFCYVDKAWLAVLLLMISFGMHSAVHTGFHINQ 351
+ KI++ +R+ N G F++ Y A++ L+ + GM +GF++N
Sbjct: 357 SNKILSTTAVRKIFNCGGFGGEAAFMLIVAYTTSDTTAIMALIAAVGMSGFAISGFNVNH 416
Query: 350 IDLSPNFAGPIMSLGNMVANLTSLLVPVIVSNIVKDDLKNPSRWQIVFLITVSFQFITNA 171
+D++P +A +M N + L L P + W VFL+ F
Sbjct: 417 LDIAPRYAAILMGFSNGIGTLAGLTCPFVTEAFTAHSKHG---WTSVFLLASLIHFTGVT 473
Query: 170 VFVIFVKGSVQPWNFHDEE 114
+ ++ G +Q W EE
Sbjct: 474 FYAVYASGELQEWAEPKEE 492
>Z82285-3|CAD56246.1| 573|Caenorhabditis elegans Hypothetical
protein T28F3.4a protein.
Length = 573
Score = 59.3 bits (137), Expect = 2e-09
Identities = 39/142 (27%), Positives = 65/142 (45%), Gaps = 3/142 (2%)
Frame = -1
Query: 527 KKIMTVANIRRTANTIGMVLSGFFLIGFCY-VD--KAWLAVLLLMISFGMHSAVHTGFHI 357
KKI++ + + +I FLI Y VD L + + +G + +GF+
Sbjct: 370 KKIISGTFGVKLSQSIANFGGALFLILITYFVDCTNPTLGFVFFCMMYGCMGTLVSGFYT 429
Query: 356 NQIDLSPNFAGPIMSLGNMVANLTSLLVPVIVSNIVKDDLKNPSRWQIVFLITVSFQFIT 177
+ + L+P + + S+ A + L P IV I K + S WQ +FL+ + I
Sbjct: 430 SLLSLAPKYTATMSSISVFCAMMGRLATPAIVGLIKKQNTL--SEWQTLFLVCAAANIIC 487
Query: 176 NAVFVIFVKGSVQPWNFHDEER 111
AVF++F G +Q W DE +
Sbjct: 488 GAVFLVFGSGELQEWGLEDEAK 509
>AF022973-2|AAC25800.2| 527|Caenorhabditis elegans Hypothetical
protein F25G6.7a protein.
Length = 527
Score = 58.0 bits (134), Expect = 5e-09
Identities = 34/127 (26%), Positives = 63/127 (49%), Gaps = 3/127 (2%)
Frame = -1
Query: 503 IRRTANTIGMVLSGFFLIGFCYVDK--AWLAVLLLMISFGMHSAVHT-GFHINQIDLSPN 333
I + N+IG + G FL+ ++D AW+AVL L +S + +HT G + + ++P
Sbjct: 370 ICKVLNSIGSIGLGVFLLAATFLDNEHAWMAVLFLCLSMA-SAGLHTPGCQLALVSVAPA 428
Query: 332 FAGPIMSLGNMVANLTSLLVPVIVSNIVKDDLKNPSRWQIVFLITVSFQFITNAVFVIFV 153
++G + ++ ++ P+I IVKD + + W +VF I+ +F ++
Sbjct: 429 YSGAVTGFTFFFVAVSGIIHPIITKMIVKD--RTAAEWNLVFYISTVIAIFPIIIFNVWG 486
Query: 152 KGSVQPW 132
VQ W
Sbjct: 487 STEVQWW 493
>AF022973-1|AAT81194.1| 513|Caenorhabditis elegans Hypothetical
protein F25G6.7b protein.
Length = 513
Score = 58.0 bits (134), Expect = 5e-09
Identities = 34/127 (26%), Positives = 63/127 (49%), Gaps = 3/127 (2%)
Frame = -1
Query: 503 IRRTANTIGMVLSGFFLIGFCYVDK--AWLAVLLLMISFGMHSAVHT-GFHINQIDLSPN 333
I + N+IG + G FL+ ++D AW+AVL L +S + +HT G + + ++P
Sbjct: 356 ICKVLNSIGSIGLGVFLLAATFLDNEHAWMAVLFLCLSMA-SAGLHTPGCQLALVSVAPA 414
Query: 332 FAGPIMSLGNMVANLTSLLVPVIVSNIVKDDLKNPSRWQIVFLITVSFQFITNAVFVIFV 153
++G + ++ ++ P+I IVKD + + W +VF I+ +F ++
Sbjct: 415 YSGAVTGFTFFFVAVSGIIHPIITKMIVKD--RTAAEWNLVFYISTVIAIFPIIIFNVWG 472
Query: 152 KGSVQPW 132
VQ W
Sbjct: 473 STEVQWW 479
>AF003138-5|AAL77178.1| 488|Caenorhabditis elegans Hypothetical
protein F12B6.2b protein.
Length = 488
Score = 56.4 bits (130), Expect = 1e-08
Identities = 33/134 (24%), Positives = 58/134 (43%), Gaps = 2/134 (1%)
Frame = -1
Query: 527 KKIMTVANIRRTANTIGMVLSGFFLIGFCY--VDKAWLAVLLLMISFGMHSAVHTGFHIN 354
+K+ A + + +N I S F++ Y D A L L +++S SA G++ +
Sbjct: 288 RKVNATA-VTKVSNAIASFASAIFIVIAAYGPFDSAELVQLSIIVSMAAFSAYVPGYNTS 346
Query: 353 QIDLSPNFAGPIMSLGNMVANLTSLLVPVIVSNIVKDDLKNPSRWQIVFLITVSFQFITN 174
+ ++P F I S + A + S L P+++ I W+ F +T
Sbjct: 347 IVTVAPQFTAFISSYAQLYAQIASTLAPIVIGRITSHG--TIYEWKCAFYSLAGVLAVTG 404
Query: 173 AVFVIFVKGSVQPW 132
+F IF G +PW
Sbjct: 405 LIFQIFGHGRTEPW 418
>AF003138-3|AAM15568.1| 504|Caenorhabditis elegans Hypothetical
protein F12B6.2c protein.
Length = 504
Score = 56.4 bits (130), Expect = 1e-08
Identities = 33/134 (24%), Positives = 58/134 (43%), Gaps = 2/134 (1%)
Frame = -1
Query: 527 KKIMTVANIRRTANTIGMVLSGFFLIGFCY--VDKAWLAVLLLMISFGMHSAVHTGFHIN 354
+K+ A + + +N I S F++ Y D A L L +++S SA G++ +
Sbjct: 288 RKVNATA-VTKVSNAIASFASAIFIVIAAYGPFDSAELVQLSIIVSMAAFSAYVPGYNTS 346
Query: 353 QIDLSPNFAGPIMSLGNMVANLTSLLVPVIVSNIVKDDLKNPSRWQIVFLITVSFQFITN 174
+ ++P F I S + A + S L P+++ I W+ F +T
Sbjct: 347 IVTVAPQFTAFISSYAQLYAQIASTLAPIVIGRITSHG--TIYEWKCAFYSLAGVLAVTG 404
Query: 173 AVFVIFVKGSVQPW 132
+F IF G +PW
Sbjct: 405 LIFQIFGHGRTEPW 418
>AF003138-2|AAM15567.1| 546|Caenorhabditis elegans Hypothetical
protein F12B6.2a protein.
Length = 546
Score = 56.4 bits (130), Expect = 1e-08
Identities = 33/134 (24%), Positives = 58/134 (43%), Gaps = 2/134 (1%)
Frame = -1
Query: 527 KKIMTVANIRRTANTIGMVLSGFFLIGFCY--VDKAWLAVLLLMISFGMHSAVHTGFHIN 354
+K+ A + + +N I S F++ Y D A L L +++S SA G++ +
Sbjct: 330 RKVNATA-VTKVSNAIASFASAIFIVIAAYGPFDSAELVQLSIIVSMAAFSAYVPGYNTS 388
Query: 353 QIDLSPNFAGPIMSLGNMVANLTSLLVPVIVSNIVKDDLKNPSRWQIVFLITVSFQFITN 174
+ ++P F I S + A + S L P+++ I W+ F +T
Sbjct: 389 IVTVAPQFTAFISSYAQLYAQIASTLAPIVIGRITSHG--TIYEWKCAFYSLAGVLAVTG 446
Query: 173 AVFVIFVKGSVQPW 132
+F IF G +PW
Sbjct: 447 LIFQIFGHGRTEPW 460
>U58737-3|AAM69082.2| 189|Caenorhabditis elegans Hypothetical
protein ZK54.3 protein.
Length = 189
Score = 54.8 bits (126), Expect = 4e-08
Identities = 29/124 (23%), Positives = 56/124 (45%)
Frame = -1
Query: 503 IRRTANTIGMVLSGFFLIGFCYVDKAWLAVLLLMISFGMHSAVHTGFHINQIDLSPNFAG 324
+ +T + + FL + L V L IS G +GF +N +DL+P +AG
Sbjct: 60 VNKTKIPVKFIGQAVFLFLVTTTSNSILLVTLFSISSGFGGICWSGFLVNHLDLAPQYAG 119
Query: 323 PIMSLGNMVANLTSLLVPVIVSNIVKDDLKNPSRWQIVFLITVSFQFITNAVFVIFVKGS 144
+++L + +A + ++ P ++ IVK W ++ + ++F F +
Sbjct: 120 HLIALSHTLATIPAIFGPSLIKAIVKHG--TIDEWNVIMYGGIIAYLFGASIFWKFADAN 177
Query: 143 VQPW 132
+QPW
Sbjct: 178 IQPW 181
>Z81109-1|CAB03245.1| 485|Caenorhabditis elegans Hypothetical
protein R10D12.1 protein.
Length = 485
Score = 51.6 bits (118), Expect = 4e-07
Identities = 33/124 (26%), Positives = 59/124 (47%), Gaps = 2/124 (1%)
Frame = -1
Query: 497 RTANTIGMVLSGFFLI--GFCYVDKAWLAVLLLMISFGMHSAVHTGFHINQIDLSPNFAG 324
R NTI + S FL+ GF + L ++L+ ++ GM GF +S +
Sbjct: 344 RIYNTIALGASAIFLVSLGFVKQGQGVLGLVLMTLATGMFGFNGGGFSKCAALVSRQYNH 403
Query: 323 PIMSLGNMVANLTSLLVPVIVSNIVKDDLKNPSRWQIVFLITVSFQFITNAVFVIFVKGS 144
+M++ ++ L+ ++ P+IVS I++ + W+IVF + + I NA+F
Sbjct: 404 FVMAIQQILVCLSMIVCPIIVSTILQHG--TTAEWRIVFFVHAAILLICNAIFCWLATAK 461
Query: 143 VQPW 132
PW
Sbjct: 462 PAPW 465
>L23649-1|AAA27912.1| 568|Caenorhabditis elegans Hypothetical
protein C02C2.4 protein.
Length = 568
Score = 50.0 bits (114), Expect = 1e-06
Identities = 34/153 (22%), Positives = 71/153 (46%)
Frame = -1
Query: 530 TKKIMTVANIRRTANTIGMVLSGFFLIGFCYVDKAWLAVLLLMISFGMHSAVHTGFHINQ 351
TK + + ++ ++L FF+ C L LM S M + V +GF+ +
Sbjct: 396 TKAVKVSHGVASFGSSFSLILLAFFVD--CSNPTTGLIFFCLMYS-SMGTFV-SGFYTSL 451
Query: 350 IDLSPNFAGPIMSLGNMVANLTSLLVPVIVSNIVKDDLKNPSRWQIVFLITVSFQFITNA 171
+ L+P + + ++ VA + L P ++S KD + WQ +F+ + +
Sbjct: 452 LSLAPQYTATMSAISMFVAMIGRLTTPAVMSMFRKDG--TAAEWQNIFIGCSLAHIFSGS 509
Query: 170 VFVIFVKGSVQPWNFHDEERIGTGVEELKSLND 72
+F++F G +Q W ++++ E+LK++ +
Sbjct: 510 IFLLFGSGELQDWAKVEDDQEMNEKEKLKTIEN 542
>Z70037-1|CAA93878.1| 493|Caenorhabditis elegans Hypothetical
protein T27D12.1 protein.
Length = 493
Score = 45.6 bits (103), Expect = 3e-05
Identities = 36/124 (29%), Positives = 58/124 (46%), Gaps = 2/124 (1%)
Frame = -1
Query: 497 RTANTIGMVLSGFFL--IGFCYVDKAWLAVLLLMISFGMHSAVHTGFHINQIDLSPNFAG 324
R NT+ V S FL + F + +++L + M A GF LS ++
Sbjct: 334 RLFNTLAFVGSAGFLCVLAFMGDEHKRNNMIVLGCAAAMLGATTGGFFKAGPVLSKQYSH 393
Query: 323 PIMSLGNMVANLTSLLVPVIVSNIVKDDLKNPSRWQIVFLITVSFQFITNAVFVIFVKGS 144
+ ++ +T L+VP V+ + ++ + W+ VFLIT + ITN FVIFV+G
Sbjct: 394 FVTGNISLGITITMLIVPFFVNALTPNNTQE--EWKYVFLITGAVMVITNIFFVIFVRGD 451
Query: 143 VQPW 132
W
Sbjct: 452 PCEW 455
>Z83236-1|CAB05777.1| 445|Caenorhabditis elegans Hypothetical
protein K10H10.1 protein.
Length = 445
Score = 41.9 bits (94), Expect = 3e-04
Identities = 25/123 (20%), Positives = 51/123 (41%)
Frame = -1
Query: 515 TVANIRRTANTIGMVLSGFFLIGFCYVDKAWLAVLLLMISFGMHSAVHTGFHINQIDLSP 336
TV R+ ++ F L+ W+++++ ++ H G +N D +P
Sbjct: 322 TVTYTRKLMEGASLLGIAFCLMLVPMTSSFWISLIIFTMAMAARGLHHGGVSVNPHDFAP 381
Query: 335 NFAGPIMSLGNMVANLTSLLVPVIVSNIVKDDLKNPSRWQIVFLITVSFQFITNAVFVIF 156
N AG + + N +T + I +I++ N W VF++T + + V+ +
Sbjct: 382 NHAGSVFGVFNACGAITGFVGVYIAGHILEATNNN---WSYVFVVTAAQCVVGAMVYTLL 438
Query: 155 VKG 147
G
Sbjct: 439 GTG 441
>U41110-1|AAA82415.1| 506|Caenorhabditis elegans Hypothetical
protein ZK682.2 protein.
Length = 506
Score = 38.7 bits (86), Expect = 0.003
Identities = 26/126 (20%), Positives = 50/126 (39%), Gaps = 1/126 (0%)
Frame = -1
Query: 461 FFLIGFCYVDKAWLAVLLLMISFGMHSAVHTGFHINQIDLSPNFAGPIMSLGNMVANLTS 282
F L+ C + A+ L+ ++ S G++ + + ++P I + + S
Sbjct: 367 FGLLCLCDCSQRGAAIFLICLAMCFVSGYIPGYNTSAVTIAPGQTAAIAAFSRFWGQIAS 426
Query: 281 LLVPVIVSNIVKDDLKNPSRWQIVFLITVSFQFITNAVFVIFVKGSVQPW-NFHDEERIG 105
+ P + K + W+IVF + + +T F S+Q W + H + I
Sbjct: 427 SVAPYHIGAYTKQGTAD--EWKIVFAVIAAICVVTGIFFQCCGTASLQDWDSTHSKAPIE 484
Query: 104 TGVEEL 87
EEL
Sbjct: 485 VAREEL 490
>AF022979-9|AAB69904.1| 466|Caenorhabditis elegans Hypothetical
protein T02B11.6 protein.
Length = 466
Score = 38.7 bits (86), Expect = 0.003
Identities = 30/107 (28%), Positives = 48/107 (44%), Gaps = 2/107 (1%)
Frame = -1
Query: 488 NTI--GMVLSGFFLIGFCYVDKAWLAVLLLMISFGMHSAVHTGFHINQIDLSPNFAGPIM 315
NTI G+V F +GF D+ W+A+ LL+ + S GF+ +S FA ++
Sbjct: 328 NTISCGIVSILFGGLGFISKDQKWVAMFLLIAVNCLMSTNCAGFYQCGRHVSQQFADVVI 387
Query: 314 SLGNMVANLTSLLVPVIVSNIVKDDLKNPSRWQIVFLITVSFQFITN 174
+ L VP IV+ V D+ + +W FL+ + N
Sbjct: 388 AAIQFCKCLALFFVPAIVAATVTDE-SDRGQWSHAFLVMSGLLLVAN 433
>Z81470-2|CAB03882.2| 422|Caenorhabditis elegans Hypothetical
protein C14A6.2 protein.
Length = 422
Score = 38.3 bits (85), Expect = 0.004
Identities = 28/124 (22%), Positives = 53/124 (42%), Gaps = 2/124 (1%)
Frame = -1
Query: 497 RTANTIGMVLSGFFL--IGFCYVDKAWLAVLLLMISFGMHSAVHTGFHINQIDLSPNFAG 324
R NTI + S FL +GF + ++L+ ++ M GF +S
Sbjct: 281 RIYNTIALGASAVFLAALGFVKEGQGLTGLILMTVATAMFGFNGGGFIKCAALVSRQHNH 340
Query: 323 PIMSLGNMVANLTSLLVPVIVSNIVKDDLKNPSRWQIVFLITVSFQFITNAVFVIFVKGS 144
+M+ + L+ LL P++VS +++ + W++VF + + N +F +
Sbjct: 341 FVMANVQFLLCLSMLLCPILVSFLLRHG--TIAEWRLVFFVHAGILAVCNLIFCLLATAK 398
Query: 143 VQPW 132
PW
Sbjct: 399 PAPW 402
>AL023845-4|CAA19541.1| 516|Caenorhabditis elegans Hypothetical
protein Y51B9A.6 protein.
Length = 516
Score = 37.9 bits (84), Expect = 0.005
Identities = 24/97 (24%), Positives = 46/97 (47%)
Frame = -1
Query: 422 LAVLLLMISFGMHSAVHTGFHINQIDLSPNFAGPIMSLGNMVANLTSLLVPVIVSNIVKD 243
L V+LL I + G+ + +S ++ +MS+ ++A + + +V +
Sbjct: 386 LDVILLSIPMALLGFSSGGYSKCAVMVSGQYSPFVMSIVQIIACSSLMAGSFLVPALTPS 445
Query: 242 DLKNPSRWQIVFLITVSFQFITNAVFVIFVKGSVQPW 132
D + S WQ VF+I + ITN +F++F + W
Sbjct: 446 D--SFSEWQRVFMIYGAVLAITNTIFIVFARAEPAKW 480
>Z70307-7|CAA94336.2| 531|Caenorhabditis elegans Hypothetical
protein C39E9.7 protein.
Length = 531
Score = 37.5 bits (83), Expect = 0.007
Identities = 26/128 (20%), Positives = 54/128 (42%), Gaps = 3/128 (2%)
Frame = -1
Query: 506 NIRRTANTIGMVLSGFFL--IGFCY-VDKAWLAVLLLMISFGMHSAVHTGFHINQIDLSP 336
N R NTI G FL +GF V+ ++ ++ +++ + + G H+ L
Sbjct: 383 NKMRFFNTIAFGTCGIFLFTLGFFNPVNHKYIVTVMYILASSLLGCSYAG-HLRMNQLRS 441
Query: 335 NFAGPIMSLGNMVANLTSLLVPVIVSNIVKDDLKNPSRWQIVFLITVSFQFITNAVFVIF 156
+ + + N T++ +++ ++ + + S W +F++ F I N +F F
Sbjct: 442 GHLHLFLLVNIFIVNSTAMFFSSLLNVLIAKNT-DYSSWSTLFIVHAIFLIIANIIFFFF 500
Query: 155 VKGSVQPW 132
PW
Sbjct: 501 CSSERAPW 508
>Z82278-4|CAB05257.2| 487|Caenorhabditis elegans Hypothetical
protein M162.5 protein.
Length = 487
Score = 35.5 bits (78), Expect = 0.028
Identities = 28/124 (22%), Positives = 51/124 (41%), Gaps = 2/124 (1%)
Frame = -1
Query: 497 RTANTIGMVLSGFFL--IGFCYVDKAWLAVLLLMISFGMHSAVHTGFHINQIDLSPNFAG 324
R NTI + S FL +GF + + L+ ++ M GF +S
Sbjct: 346 RIYNTIALGASAVFLAALGFVKEGQGLTGLTLMTVATAMFGFNGGGFIKCAALVSRQHNH 405
Query: 323 PIMSLGNMVANLTSLLVPVIVSNIVKDDLKNPSRWQIVFLITVSFQFITNAVFVIFVKGS 144
+M+ + L+ LL P++VS +++ + W++VF + N +F +
Sbjct: 406 FVMANVQFLLCLSMLLCPILVSFLLRHG--TITEWRLVFFVHAGILAACNLIFCLLATAK 463
Query: 143 VQPW 132
PW
Sbjct: 464 PAPW 467
>Z47070-1|CAA87340.1| 516|Caenorhabditis elegans Hypothetical
protein T09B9.2 protein.
Length = 516
Score = 35.1 bits (77), Expect = 0.037
Identities = 24/97 (24%), Positives = 46/97 (47%), Gaps = 1/97 (1%)
Frame = -1
Query: 419 AVLLLMISFGMHSAVHT-GFHINQIDLSPNFAGPIMSLGNMVANLTSLLVPVIVSNIVKD 243
A+++L ++ + +HT G + L+P F+G I L VA+ S+ +++S I++
Sbjct: 379 AIIILCLA-NAFAGLHTPGVLTAIVQLAPAFSGIITGLAFAVASCFSIFNKLLISQILRT 437
Query: 242 DLKNPSRWQIVFLITVSFQFITNAVFVIFVKGSVQPW 132
K+ W IVF I+ + F ++ W
Sbjct: 438 GSKH--EWTIVFEISAFVAILPTIFFTLWGSAERTEW 472
>U64609-8|AAB04605.2| 465|Caenorhabditis elegans Hypothetical
protein T28H11.8 protein.
Length = 465
Score = 35.1 bits (77), Expect = 0.037
Identities = 25/109 (22%), Positives = 51/109 (46%)
Frame = -1
Query: 458 FLIGFCYVDKAWLAVLLLMISFGMHSAVHTGFHINQIDLSPNFAGPIMSLGNMVANLTSL 279
FL GF D+ W +++ +MI +H V + + ++L ++A + +
Sbjct: 328 FLTGFLD-DRVW-SLIFMMIFASLHFFVPVICSRTIQIRAGQHSHFALNLNMVIAGIAQI 385
Query: 278 LVPVIVSNIVKDDLKNPSRWQIVFLITVSFQFITNAVFVIFVKGSVQPW 132
L+P+ V V ++ + S+W VF V IT+ ++ +F + + W
Sbjct: 386 LIPLGVQAAVPENTR--SQWSFVFYFLVITVVITSILYTLFSRATPAEW 432
>U23521-9|AAC46809.2| 499|Caenorhabditis elegans Hypothetical
protein F41C3.2 protein.
Length = 499
Score = 33.5 bits (73), Expect = 0.11
Identities = 16/77 (20%), Positives = 34/77 (44%)
Frame = -1
Query: 281 LLVPVIVSNIVKDDLKNPSRWQIVFLITVSFQFITNAVFVIFVKGSVQPWNFHDEERIGT 102
L +P++V+ + +D N W +FLI F++N +F+ F W E
Sbjct: 424 LFLPLLVNFVAPNDTHN--EWTRLFLIIFCIVFVSNLIFIAFSSTEPAQWTIGTSEVDNR 481
Query: 101 GVEELKSLNDHKNSIKE 51
++L+ ++++
Sbjct: 482 SEQDLEDQKSTSTTVEK 498
>AF125971-2|AAN73291.1| 458|Caenorhabditis elegans Hypothetical
protein Y4C6B.4a protein.
Length = 458
Score = 33.1 bits (72), Expect = 0.15
Identities = 26/102 (25%), Positives = 40/102 (39%), Gaps = 1/102 (0%)
Frame = -1
Query: 422 LAVLLLMISFGMHSAVHTG-FHINQIDLSPNFAGPIMSLGNMVANLTSLLVPVIVSNIVK 246
LA+L ISF G H Q F+ ++S ++ P +V+ V
Sbjct: 350 LAILECFISFNSGGFYKCGTLHARQ------FSSIVISAIQFTKCISLFSGPALVAFFVT 403
Query: 245 DDLKNPSRWQIVFLITVSFQFITNAVFVIFVKGSVQPWNFHD 120
D+ N ++W VF+ F F+ N + IF W D
Sbjct: 404 DE-SNQTQWSHVFMTLAGFSFVANILSFIFFTDKPAKWTEDD 444
>U64844-11|AAB18311.1| 482|Caenorhabditis elegans Hypothetical
protein T22F3.8 protein.
Length = 482
Score = 32.7 bits (71), Expect = 0.20
Identities = 31/126 (24%), Positives = 51/126 (40%), Gaps = 2/126 (1%)
Frame = -1
Query: 488 NTIGMVLSGFFL--IGFCYVDKAWLAVLLLMISFGMHSAVHTGFHINQIDLSPNFAGPIM 315
NTI + SG F IG ++ +V +++ GF+ + S FA ++
Sbjct: 353 NTISVGGSGLFFASIGLIPMEYRGWSVFSCIMTMSCIGVNPGGFYKVAVLHSRQFAHVVL 412
Query: 314 SLGNMVANLTSLLVPVIVSNIVKDDLKNPSRWQIVFLITVSFQFITNAVFVIFVKGSVQP 135
+ + L + P +VS V ++ +W VFLI ITN + F+
Sbjct: 413 TAIQWIKCLALFVAPALVSIFVTNESIR-QQWIWVFLIVGGGMVITNILGFFFLTDKPAE 471
Query: 134 WNFHDE 117
W DE
Sbjct: 472 WTDTDE 477
>Z68317-3|CAA92687.1| 599|Caenorhabditis elegans Hypothetical
protein T01H3.3 protein.
Length = 599
Score = 32.3 bits (70), Expect = 0.26
Identities = 38/150 (25%), Positives = 71/150 (47%), Gaps = 5/150 (3%)
Frame = -1
Query: 566 LYFSATYLITY*TKKIMTVANIRRTANTIGMVLSGFFLIGFCYVDKAWLAVLLL--MISF 393
+ FS+ ++ + KI+ + N TA IG +L ++ KA L LLL M+ F
Sbjct: 437 IIFSSLNVLFKPSTKIVRILNF--TAFAIGAILMIAIVLVASLQTKAGLFSLLLISMLPF 494
Query: 392 GMHSAVHTGFHINQIDLSPNFAGPIMSLGNMVANLTSLLVPVIVSNIVKDDLKNPSRWQI 213
G+ A+ GF + + FA I+++ + L ++P++V+ V ++ + W
Sbjct: 495 GL--AIVAGFVRSLTVVGRVFAEQIVAMCAVPFGLAFSILPMVVTYSVTEN--KLAEW-- 548
Query: 212 VFLITVSFQFITNAV---FVIFVKGSVQPW 132
+T+ F+ +AV F +F +G W
Sbjct: 549 -MKVTMFLFFVLSAVAIEFAVFGRGKSASW 577
>AY077615-1|AAL79359.1| 510|Caenorhabditis elegans KSR-2b protein.
Length = 510
Score = 30.3 bits (65), Expect = 1.1
Identities = 12/31 (38%), Positives = 21/31 (67%)
Frame = -3
Query: 570 MAIFFGYISDYLLNKKDYDSSQHQKNSEYHR 478
+A+F+GY+SD + N ++ +Q N+ YHR
Sbjct: 267 IALFYGYVSDPVTNTYAIVTNFYQHNTLYHR 297
>AY077614-1|AAL79358.1| 550|Caenorhabditis elegans KSR-2a protein.
Length = 550
Score = 30.3 bits (65), Expect = 1.1
Identities = 12/31 (38%), Positives = 21/31 (67%)
Frame = -3
Query: 570 MAIFFGYISDYLLNKKDYDSSQHQKNSEYHR 478
+A+F+GY+SD + N ++ +Q N+ YHR
Sbjct: 307 IALFYGYVSDPVTNTYAIVTNFYQHNTLYHR 337
>AL137227-5|CAB70240.2| 510|Caenorhabditis elegans Hypothetical
protein F58D5.4b protein.
Length = 510
Score = 30.3 bits (65), Expect = 1.1
Identities = 12/31 (38%), Positives = 21/31 (67%)
Frame = -3
Query: 570 MAIFFGYISDYLLNKKDYDSSQHQKNSEYHR 478
+A+F+GY+SD + N ++ +Q N+ YHR
Sbjct: 267 IALFYGYVSDPVTNTYAIVTNFYQHNTLYHR 297
>AL137227-4|CAB70239.2| 550|Caenorhabditis elegans Hypothetical
protein F58D5.4a protein.
Length = 550
Score = 30.3 bits (65), Expect = 1.1
Identities = 12/31 (38%), Positives = 21/31 (67%)
Frame = -3
Query: 570 MAIFFGYISDYLLNKKDYDSSQHQKNSEYHR 478
+A+F+GY+SD + N ++ +Q N+ YHR
Sbjct: 307 IALFYGYVSDPVTNTYAIVTNFYQHNTLYHR 337
>U35250-2|AAB41910.1| 492|Caenorhabditis elegans CeGlt-1 protein.
Length = 492
Score = 29.1 bits (62), Expect = 2.4
Identities = 28/113 (24%), Positives = 58/113 (51%), Gaps = 5/113 (4%)
Frame = -1
Query: 416 VLLLMISFGMHSAVHTGFHINQIDLSPNFAGPIMSLGNMVANLTSLLV-PVIVSNIVKDD 240
+L+L +S + A+ GF + + LSP I G ++ ++ +++ P+I+S+++
Sbjct: 10 LLVLTVSSVVLGAL-CGFLLRGLQLSPQNIMYISFPGELLMHMLKMMIPPLIMSSLISGL 68
Query: 239 LKNPSRWQ-IVFLITVSFQFITNAVFV---IFVKGSVQPWNFHDEERIGTGVE 93
+ +R + + V++ T AV V IF+ + P + ++ IGTG E
Sbjct: 69 AQLDARQSGKLGSLAVTYYMFTTAVAVVTGIFLVLVIHPGDPTIKKEIGTGTE 121
>U35250-1|AAB41909.1| 503|Caenorhabditis elegans CeGlt-2 protein.
Length = 503
Score = 29.1 bits (62), Expect = 2.4
Identities = 28/113 (24%), Positives = 58/113 (51%), Gaps = 5/113 (4%)
Frame = -1
Query: 416 VLLLMISFGMHSAVHTGFHINQIDLSPNFAGPIMSLGNMVANLTSLLV-PVIVSNIVKDD 240
+L+L +S + A+ GF + + LSP I G ++ ++ +++ P+I+S+++
Sbjct: 21 LLVLTVSSVVLGAL-CGFLLRGLQLSPQNIMYISFPGELLMHMLKMMIPPLIMSSLISGL 79
Query: 239 LKNPSRWQ-IVFLITVSFQFITNAVFV---IFVKGSVQPWNFHDEERIGTGVE 93
+ +R + + V++ T AV V IF+ + P + ++ IGTG E
Sbjct: 80 AQLDARQSGKLGSLAVTYYMFTTAVAVVTGIFLVLVIHPGDPTIKKEIGTGTE 132
>Z70310-2|CAA94367.1| 462|Caenorhabditis elegans Hypothetical
protein R11A8.2 protein.
Length = 462
Score = 27.9 bits (59), Expect = 5.7
Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Frame = -3
Query: 528 KKDYDSSQHQKNS-EYHRNGTIWVFLDWIL 442
K SS+H KNS EY RN +W D ++
Sbjct: 321 KSKSSSSKHDKNSSEYERNDKMWARTDLLV 350
>AF039710-4|AAD32273.1| 347|Caenorhabditis elegans Serpentine
receptor, class h protein99 protein.
Length = 347
Score = 27.9 bits (59), Expect = 5.7
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = -1
Query: 218 QIVFLITVSFQFITNAVFVIFVKGSVQPWNFHDEERIGTGVE 93
Q FL V QF ++F++F G + F+ +E + GV+
Sbjct: 254 QKTFLRNVILQFSIPSIFILFSIGIIFTSRFYSQEMMNLGVD 295
>Z73912-1|CAA98145.1| 465|Caenorhabditis elegans Hypothetical
protein ZK524.1 protein.
Length = 465
Score = 27.5 bits (58), Expect = 7.5
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = -1
Query: 482 IGMVLSGFFLIGFCYVDKAWLAVLLLMISFGM 387
+ ++ F L F + KAWL + L+I FG+
Sbjct: 82 VSFIMLAFVLFDFRRIVKAWLTLSCLLILFGV 113
>Z14067-1|CAA78450.1| 465|Caenorhabditis elegans putative integral
membrane protein protein.
Length = 465
Score = 27.5 bits (58), Expect = 7.5
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = -1
Query: 482 IGMVLSGFFLIGFCYVDKAWLAVLLLMISFGM 387
+ ++ F L F + KAWL + L+I FG+
Sbjct: 82 VSFIMLAFVLFDFRRIVKAWLTLSCLLILFGV 113
>Z14066-1|CAA78449.1| 465|Caenorhabditis elegans putative integral
membrane protein protein.
Length = 465
Score = 27.5 bits (58), Expect = 7.5
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = -1
Query: 482 IGMVLSGFFLIGFCYVDKAWLAVLLLMISFGM 387
+ ++ F L F + KAWL + L+I FG+
Sbjct: 82 VSFIMLAFVLFDFRRIVKAWLTLSCLLILFGV 113
>U64844-10|AAB18310.1| 448|Caenorhabditis elegans Hypothetical
protein T22F3.7 protein.
Length = 448
Score = 27.1 bits (57), Expect = 9.9
Identities = 16/53 (30%), Positives = 22/53 (41%)
Frame = -1
Query: 290 LTSLLVPVIVSNIVKDDLKNPSRWQIVFLITVSFQFITNAVFVIFVKGSVQPW 132
L + P +VS V ++ N +W VFLI ITN V + W
Sbjct: 384 LALFVAPALVSIFVHEE-SNRLQWIWVFLIVGGLMIITNIVAFFILTDKPASW 435
>AF067942-8|AAG45575.1| 349|Caenorhabditis elegans Serpentine
receptor, class h protein62 protein.
Length = 349
Score = 27.1 bits (57), Expect = 9.9
Identities = 19/84 (22%), Positives = 40/84 (47%), Gaps = 1/84 (1%)
Frame = -1
Query: 503 IRRTANTIGMVLSGFFLIGFCY-VDKAWLAVLLLMISFGMHSAVHTGFHINQIDLSPNFA 327
+R+T ++ V G + FCY + + A L++ I + +A +T +N +++ P F
Sbjct: 55 LRKTPESMKSVQLGLLNLNFCYTISQFTQAFLIVPIFYLPFAAFNTVGLVNYLNIPPVFQ 114
Query: 326 GPIMSLGNMVANLTSLLVPVIVSN 255
M + N T + + ++ N
Sbjct: 115 ---MYFSITMINATLVSITILFEN 135
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,415,631
Number of Sequences: 27780
Number of extensions: 280194
Number of successful extensions: 895
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 859
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 885
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1237082886
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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