Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV31056.Seq
(428 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9GP16 Cluster: 60S ribosomal protein L31; n=27; Coelom... 150 1e-35
UniRef50_P62899 Cluster: 60S ribosomal protein L31; n=48; Metazo... 126 2e-28
UniRef50_Q9V597 Cluster: 60S ribosomal protein L31; n=173; Eukar... 114 6e-25
UniRef50_Q9GN74 Cluster: 60S ribosomal protein L31; n=20; Coelom... 114 8e-25
UniRef50_UPI00005A08CD Cluster: PREDICTED: similar to ribosomal ... 103 1e-21
UniRef50_Q4PI65 Cluster: Putative uncharacterized protein; n=1; ... 100 3e-20
UniRef50_P51420 Cluster: 60S ribosomal protein L31-3; n=12; Euka... 99 4e-20
UniRef50_UPI0000DA1BEE Cluster: PREDICTED: similar to ribosomal ... 89 5e-17
UniRef50_UPI0001505641 Cluster: 60S ribosomal protein L31 (RPL31... 85 4e-16
UniRef50_UPI0000D9FB71 Cluster: PREDICTED: similar to ribosomal ... 82 5e-15
UniRef50_Q22DH9 Cluster: 60S ribosomal protein L31, putative; n=... 77 2e-13
UniRef50_Q7RSL1 Cluster: Ribosomal protein L31e, putative; n=7; ... 68 1e-10
UniRef50_UPI000049A444 Cluster: 60S ribosomal protein L31; n=2; ... 66 2e-10
UniRef50_Q6Y207 Cluster: Ribosomal protein L31; n=9; Euteleostom... 62 4e-09
UniRef50_UPI00005A10F5 Cluster: PREDICTED: similar to ribosomal ... 61 1e-08
UniRef50_Q06740 Cluster: Putative uncharacterized protein; n=1; ... 60 3e-08
UniRef50_Q1X7K2 Cluster: Ribosomal protein L31; n=7; Trypanosoma... 51 9e-06
UniRef50_Q7QSE2 Cluster: GLP_426_16236_15916; n=1; Giardia lambl... 49 4e-05
UniRef50_UPI00005A550D Cluster: PREDICTED: similar to ribosomal ... 48 1e-04
UniRef50_P54009 Cluster: 50S ribosomal protein L31e; n=7; Euryar... 45 6e-04
UniRef50_Q98RR6 Cluster: 60S ribosomal protein L31; n=1; Guillar... 45 8e-04
UniRef50_Q74MC9 Cluster: NEQ364; n=1; Nanoarchaeum equitans|Rep:... 43 0.002
UniRef50_Q9YD25 Cluster: 50S ribosomal protein L31e; n=1; Aeropy... 42 0.004
UniRef50_UPI00015BAD97 Cluster: LSU ribosomal protein L31E; n=1;... 42 0.007
UniRef50_Q8U3S7 Cluster: 50S ribosomal protein L31e; n=5; Thermo... 41 0.013
UniRef50_A2X8Z3 Cluster: Putative uncharacterized protein; n=1; ... 40 0.017
UniRef50_Q8PYQ4 Cluster: 50S ribosomal protein L31e; n=11; Eurya... 40 0.017
UniRef50_O28213 Cluster: 50S ribosomal protein L31e; n=1; Archae... 40 0.029
UniRef50_A3DNH4 Cluster: 50S ribosomal protein L31e; n=2; Desulf... 36 0.47
UniRef50_A0CQV2 Cluster: Chromosome undetermined scaffold_24, wh... 35 0.82
UniRef50_A0RW54 Cluster: Ribosomal protein L31E; n=2; Thermoprot... 35 0.82
UniRef50_A2EKX9 Cluster: Ribosomal protein L31e, putative; n=6; ... 33 2.5
UniRef50_Q02B40 Cluster: HAD-superfamily hydrolase, subfamily IA... 33 3.3
UniRef50_Q820F4 Cluster: Holliday junction ATP-dependent DNA hel... 31 7.7
>UniRef50_Q9GP16 Cluster: 60S ribosomal protein L31; n=27;
Coelomata|Rep: 60S ribosomal protein L31 - Heliothis
virescens (Noctuid moth) (Owlet moth)
Length = 124
Score = 150 bits (363), Expect = 1e-35
Identities = 69/72 (95%), Positives = 71/72 (98%)
Frame = +3
Query: 42 MAKPXGERKGKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIR 221
MAKP GERKGKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPD+R
Sbjct: 1 MAKPKGERKGKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDVR 60
Query: 222 VDTRLNKFLWSR 257
VDTRLNKFLWS+
Sbjct: 61 VDTRLNKFLWSK 72
Score = 86.2 bits (204), Expect = 3e-16
Identities = 42/52 (80%), Positives = 42/52 (80%)
Frame = +2
Query: 257 GVRNVPFXXXXXXXXXXNDDEDSAHKLFTLVTYVPVASIKGLQTENVDASQE 412
GVRNVPF NDDEDSAHKLFTLVTYVPVASIKGLQTENVDASQE
Sbjct: 73 GVRNVPFRVRVRLSRRRNDDEDSAHKLFTLVTYVPVASIKGLQTENVDASQE 124
>UniRef50_P62899 Cluster: 60S ribosomal protein L31; n=48;
Metazoa|Rep: 60S ribosomal protein L31 - Homo sapiens
(Human)
Length = 125
Score = 126 bits (304), Expect = 2e-28
Identities = 56/75 (74%), Positives = 68/75 (90%), Gaps = 1/75 (1%)
Frame = +3
Query: 36 MTMAKPXGERK-GKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTP 212
M AK GE+K G+SAINEVVTREYT+N+HKR+HGVGFKKRAPRA+KEIRKFA K+MGTP
Sbjct: 1 MAPAKKGGEKKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTP 60
Query: 213 DIRVDTRLNKFLWSR 257
D+R+DTRLNK +W++
Sbjct: 61 DVRIDTRLNKAVWAK 75
Score = 60.1 bits (139), Expect = 2e-08
Identities = 27/48 (56%), Positives = 33/48 (68%)
Frame = +2
Query: 257 GVRNVPFXXXXXXXXXXNDDEDSAHKLFTLVTYVPVASIKGLQTENVD 400
G+RNVP+ N+DEDS +KL+TLVTYVPV + K LQT NVD
Sbjct: 76 GIRNVPYRIRVRLSRKRNEDEDSPNKLYTLVTYVPVTTFKNLQTVNVD 123
>UniRef50_Q9V597 Cluster: 60S ribosomal protein L31; n=173;
Eukaryota|Rep: 60S ribosomal protein L31 - Drosophila
melanogaster (Fruit fly)
Length = 124
Score = 114 bits (275), Expect = 6e-25
Identities = 51/72 (70%), Positives = 62/72 (86%)
Frame = +3
Query: 42 MAKPXGERKGKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIR 221
M K GE+ KSAINEVVTRE T++L KR+H +GFKKRAPRAIKEIRKFAE++MGT D+R
Sbjct: 1 MTKTKGEKINKSAINEVVTRECTIHLAKRVHNIGFKKRAPRAIKEIRKFAEREMGTTDVR 60
Query: 222 VDTRLNKFLWSR 257
+DTRLNK +WS+
Sbjct: 61 IDTRLNKHIWSK 72
Score = 61.7 bits (143), Expect = 6e-09
Identities = 27/52 (51%), Positives = 36/52 (69%)
Frame = +2
Query: 257 GVRNVPFXXXXXXXXXXNDDEDSAHKLFTLVTYVPVASIKGLQTENVDASQE 412
G+R+ PF NDDEDS +KL+T VTYVPV++ K LQTENV++S +
Sbjct: 73 GIRSTPFRIRVRLARRRNDDEDSPNKLYTYVTYVPVSTFKNLQTENVESSDD 124
>UniRef50_Q9GN74 Cluster: 60S ribosomal protein L31; n=20;
Coelomata|Rep: 60S ribosomal protein L31 - Aedes aegypti
(Yellowfever mosquito)
Length = 124
Score = 114 bits (274), Expect = 8e-25
Identities = 52/72 (72%), Positives = 62/72 (86%)
Frame = +3
Query: 42 MAKPXGERKGKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIR 221
MAK E+K KSAINEVVTRE T+NL++RLH VG+KKRAPRA+K +RKFAEK+MGT D+R
Sbjct: 1 MAKTKTEKKAKSAINEVVTRECTINLNRRLHKVGYKKRAPRAVKIVRKFAEKEMGTNDVR 60
Query: 222 VDTRLNKFLWSR 257
+DTRLNK LW R
Sbjct: 61 IDTRLNKALWHR 72
Score = 63.7 bits (148), Expect = 2e-09
Identities = 28/52 (53%), Positives = 38/52 (73%)
Frame = +2
Query: 257 GVRNVPFXXXXXXXXXXNDDEDSAHKLFTLVTYVPVASIKGLQTENVDASQE 412
G+RN PF NDDEDS +KL+TLVTYVPV++ K LQTENV+++++
Sbjct: 73 GIRNPPFRIRVRLSRRRNDDEDSPNKLYTLVTYVPVSTFKELQTENVESTED 124
>UniRef50_UPI00005A08CD Cluster: PREDICTED: similar to ribosomal
protein L31; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L31 - Canis familiaris
Length = 130
Score = 103 bits (248), Expect = 1e-21
Identities = 42/54 (77%), Positives = 52/54 (96%)
Frame = +3
Query: 96 TREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFLWSR 257
TREYT+N+HKR+HGVGFKKRAPRA+KEIRKFA K+MGTPD+R+DTRLNK +W++
Sbjct: 60 TREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRLNKAVWAK 113
>UniRef50_Q4PI65 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 175
Score = 99.5 bits (237), Expect = 3e-20
Identities = 44/71 (61%), Positives = 57/71 (80%)
Frame = +3
Query: 63 RKGKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNK 242
+K +SA+N+VVTREYTVNLHKR+H V FKKRAPRAIKE+ FA+K MGT D+R+D +LN+
Sbjct: 60 KKTRSALNDVVTREYTVNLHKRVHDVAFKKRAPRAIKEVVAFAQKAMGTKDVRLDPKLNQ 119
Query: 243 FLWSRESEMFP 275
+W + FP
Sbjct: 120 EVWKYGVKNFP 130
Score = 32.3 bits (70), Expect = 4.4
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = +2
Query: 257 GVRNVPFXXXXXXXXXXNDDEDSAHKLFT-LVTYVPVASIKGLQTENVD 400
GV+N P NDDE + KL+T V + + + KGLQT +D
Sbjct: 125 GVKNFPRRLRVRLERKRNDDEGAKEKLYTYAVPVLGLGTAKGLQTTVID 173
>UniRef50_P51420 Cluster: 60S ribosomal protein L31-3; n=12;
Eukaryota|Rep: 60S ribosomal protein L31-3 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 119
Score = 98.7 bits (235), Expect = 4e-20
Identities = 44/66 (66%), Positives = 55/66 (83%)
Frame = +3
Query: 60 ERKGKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLN 239
E+KG+ EV+TREYT+NLH+RLH FKK+AP+AIKEIRKFAEK MGT D+RVD +LN
Sbjct: 3 EKKGRK--EEVITREYTINLHRRLHKCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLN 60
Query: 240 KFLWSR 257
K +WS+
Sbjct: 61 KQIWSK 66
Score = 31.9 bits (69), Expect = 5.8
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Frame = +2
Query: 257 GVRNVPFXXXXXXXXXXNDDEDSAHKLFTLVTY--VPVASIKGLQTENVD 400
G+R P NDDED+ + F+LVT +P + GL T+ ++
Sbjct: 67 GIRGPPRRIRVRVARKRNDDEDAKEEFFSLVTVAEIPAEGLSGLGTKVIE 116
>UniRef50_UPI0000DA1BEE Cluster: PREDICTED: similar to ribosomal
protein L31; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to ribosomal protein L31 - Rattus norvegicus
Length = 163
Score = 88.6 bits (210), Expect = 5e-17
Identities = 46/76 (60%), Positives = 56/76 (73%)
Frame = +3
Query: 36 MTMAKPXGERKGKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPD 215
M AK G++KG SAINE+VTREYT+N+HKR+H VGFK AP A+KEI KFA K MGTP+
Sbjct: 1 MAPAKKGGKKKGHSAINEMVTREYTINIHKRIHEVGFKMHAPWALKEIWKFAIKAMGTPE 60
Query: 216 IRVDTRLNKFLWSRES 263
+ T LN L+ R S
Sbjct: 61 FVICT-LNS-LFHRSS 74
>UniRef50_UPI0001505641 Cluster: 60S ribosomal protein L31 (RPL31C);
n=1; Arabidopsis thaliana|Rep: 60S ribosomal protein L31
(RPL31C) - Arabidopsis thaliana
Length = 85
Score = 85.4 bits (202), Expect = 4e-16
Identities = 39/56 (69%), Positives = 47/56 (83%)
Frame = +3
Query: 60 ERKGKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVD 227
E+KG+ EV+TREYT+NLH+RLH FKK+AP+AIKEIRKFAEK MGT D+RVD
Sbjct: 3 EKKGRK--EEVITREYTINLHRRLHKCTFKKKAPKAIKEIRKFAEKAMGTKDVRVD 56
>UniRef50_UPI0000D9FB71 Cluster: PREDICTED: similar to ribosomal
protein L31, partial; n=1; Macaca mulatta|Rep:
PREDICTED: similar to ribosomal protein L31, partial -
Macaca mulatta
Length = 129
Score = 81.8 bits (193), Expect = 5e-15
Identities = 39/77 (50%), Positives = 55/77 (71%)
Frame = +3
Query: 93 VTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFLWSRESEMF 272
VTR YT N+ K + GVGFKKR P+A+KEI+KFA K+M T D+R+DTR NK +W++ +
Sbjct: 25 VTRGYTSNIQKHIRGVGFKKRGPQALKEIQKFAMKEMRTLDVRLDTRQNKAVWNKGTSNV 84
Query: 273 PSVSV*GFHEDVMMMKI 323
V + GF E++M + I
Sbjct: 85 SWVPICGF-ENMMKLNI 100
Score = 31.9 bits (69), Expect = 5.8
Identities = 12/18 (66%), Positives = 15/18 (83%)
Frame = +2
Query: 329 HKLFTLVTYVPVASIKGL 382
HKL+TL+TYVPV + K L
Sbjct: 101 HKLYTLITYVPVTTFKNL 118
>UniRef50_Q22DH9 Cluster: 60S ribosomal protein L31, putative; n=1;
Tetrahymena thermophila SB210|Rep: 60S ribosomal protein
L31, putative - Tetrahymena thermophila SB210
Length = 111
Score = 77.0 bits (181), Expect = 2e-13
Identities = 33/56 (58%), Positives = 41/56 (73%)
Frame = +3
Query: 108 TVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFLWSRESEMFP 275
TVNLHK+ H + FKK+APRAI+EI A+K MGT D+R+DT LNKF+WS P
Sbjct: 12 TVNLHKQCHKISFKKKAPRAIREIVAIAKKTMGTDDVRIDTELNKFIWSNGIRNIP 67
Score = 33.5 bits (73), Expect = 1.9
Identities = 16/49 (32%), Positives = 25/49 (51%)
Frame = +2
Query: 257 GVRNVPFXXXXXXXXXXNDDEDSAHKLFTLVTYVPVASIKGLQTENVDA 403
G+RN+P N++E + + +TLV ++ V S GL TE A
Sbjct: 62 GIRNIPRRVRVRLCKRKNEEEGAQSQFYTLVQHLQVDSYHGLLTEKTKA 110
>UniRef50_Q7RSL1 Cluster: Ribosomal protein L31e, putative; n=7;
Apicomplexa|Rep: Ribosomal protein L31e, putative -
Plasmodium yoelii yoelii
Length = 142
Score = 67.7 bits (158), Expect = 1e-10
Identities = 29/54 (53%), Positives = 40/54 (74%)
Frame = +3
Query: 96 TREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFLWSR 257
T+ T+NL K H V +K++APRAIKEI+ A K M T D+R+D +LNKF+WS+
Sbjct: 39 TKVITINLSKLTHDVCYKRKAPRAIKEIKNIAGKLMHTKDVRLDVKLNKFIWSK 92
Score = 38.7 bits (86), Expect = 0.051
Identities = 19/45 (42%), Positives = 25/45 (55%)
Frame = +2
Query: 257 GVRNVPFXXXXXXXXXXNDDEDSAHKLFTLVTYVPVASIKGLQTE 391
G+RN P N+DEDS +++TLV +V V S KGL E
Sbjct: 93 GIRNPPKRVRVKIERVRNEDEDSKERMYTLVQHVMVDSYKGLVNE 137
>UniRef50_UPI000049A444 Cluster: 60S ribosomal protein L31; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L31 - Entamoeba histolytica HM-1:IMSS
Length = 150
Score = 66.5 bits (155), Expect = 2e-10
Identities = 34/70 (48%), Positives = 45/70 (64%)
Frame = +3
Query: 48 KPXGERKGKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVD 227
KP E K K +TRE T+++HK LH FKKRAP+AIK IR A K M T +++ D
Sbjct: 33 KPSKEIKAKEMAP--ITREMTIHMHKYLHKESFKKRAPKAIKIIRFLAIKTMKTHNVKFD 90
Query: 228 TRLNKFLWSR 257
LN+F+WS+
Sbjct: 91 MGLNQFIWSQ 100
Score = 36.3 bits (80), Expect = 0.27
Identities = 16/31 (51%), Positives = 22/31 (70%)
Frame = +2
Query: 317 EDSAHKLFTLVTYVPVASIKGLQTENVDASQ 409
E K +TLV+YVPVAS KGL T+ V+ ++
Sbjct: 119 EGEEGKFYTLVSYVPVASFKGLVTKTVEETE 149
>UniRef50_Q6Y207 Cluster: Ribosomal protein L31; n=9;
Euteleostomi|Rep: Ribosomal protein L31 - Pagrus major
(Red sea bream) (Chrysophrys major)
Length = 91
Score = 62.5 bits (145), Expect = 4e-09
Identities = 29/48 (60%), Positives = 34/48 (70%)
Frame = +2
Query: 257 GVRNVPFXXXXXXXXXXNDDEDSAHKLFTLVTYVPVASIKGLQTENVD 400
GVRNVP+ N+DEDS +KL+TLVTYVPV + KGLQT NVD
Sbjct: 42 GVRNVPYRMRVRLSRKRNEDEDSPNKLYTLVTYVPVTTCKGLQTVNVD 89
Score = 50.4 bits (115), Expect = 2e-05
Identities = 21/31 (67%), Positives = 26/31 (83%)
Frame = +3
Query: 165 AIKEIRKFAEKQMGTPDIRVDTRLNKFLWSR 257
A IRKFA K+MGTPD+R+DTRLNK +WS+
Sbjct: 11 APSRIRKFAVKEMGTPDVRMDTRLNKAVWSK 41
>UniRef50_UPI00005A10F5 Cluster: PREDICTED: similar to ribosomal
protein L31; n=2; Eutheria|Rep: PREDICTED: similar to
ribosomal protein L31 - Canis familiaris
Length = 175
Score = 60.9 bits (141), Expect = 1e-08
Identities = 27/48 (56%), Positives = 34/48 (70%)
Frame = +2
Query: 257 GVRNVPFXXXXXXXXXXNDDEDSAHKLFTLVTYVPVASIKGLQTENVD 400
G+RNVP+ N+DEDS +KL+TLVTYVPV ++K LQT NVD
Sbjct: 126 GIRNVPYRIRVRLSRKRNEDEDSPNKLYTLVTYVPVTTLKNLQTVNVD 173
Score = 57.2 bits (132), Expect = 1e-07
Identities = 22/37 (59%), Positives = 32/37 (86%)
Frame = +3
Query: 147 KKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFLWSR 257
+K RA+K+IRKFA K++GTPD+R+DTRLNK +W++
Sbjct: 89 RKERRRALKDIRKFAMKELGTPDVRIDTRLNKAVWAK 125
>UniRef50_Q06740 Cluster: Putative uncharacterized protein; n=1;
Saccharomyces cerevisiae|Rep: Putative uncharacterized
protein - Saccharomyces cerevisiae (Baker's yeast)
Length = 77
Score = 59.7 bits (138), Expect = 3e-08
Identities = 31/50 (62%), Positives = 34/50 (68%)
Frame = -2
Query: 238 FKRVSTRMSGVPICFSANFRISLIALGARFLNPTP*SRLCKLTVYSRVTT 89
F + R S VP+C ANF ISL ALGA FL TP + LCKL VYSRVTT
Sbjct: 28 FNSGARRTSSVPMCNLANFLISLTALGALFLKETPCNLLCKLMVYSRVTT 77
>UniRef50_Q1X7K2 Cluster: Ribosomal protein L31; n=7;
Trypanosomatidae|Rep: Ribosomal protein L31 - Leishmania
major
Length = 188
Score = 51.2 bits (117), Expect = 9e-06
Identities = 24/57 (42%), Positives = 34/57 (59%)
Frame = +3
Query: 87 EVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFLWSR 257
+ V+ E T++L K L F KRAP AIK I+ F + M T D R+D LN ++W +
Sbjct: 82 DAVSMEATIHLSKLLKKKTFSKRAPLAIKRIKAFVGRLMKTKDNRIDASLNTYIWHK 138
Score = 33.9 bits (74), Expect = 1.4
Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +2
Query: 257 GVRNVPFXXXXXXXXXXNDDEDSAHKLF-TLVTYVPVASIKGLQTENVD 400
GV+ VP E + HK F T+++ VPVAS KGL T+ V+
Sbjct: 139 GVKGVPGRVRVLIQRKSETTEGNKHKHFYTVISNVPVASFKGLTTKTVE 187
>UniRef50_Q7QSE2 Cluster: GLP_426_16236_15916; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_426_16236_15916 - Giardia lamblia
ATCC 50803
Length = 106
Score = 49.2 bits (112), Expect = 4e-05
Identities = 23/55 (41%), Positives = 33/55 (60%)
Frame = +3
Query: 93 VTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFLWSR 257
+ E+T+ L+K + G KK AP AI+ IR EK D+R+D +N F+WSR
Sbjct: 3 IVYEHTIRLNKAVRGKPSKKAAPIAIRAIRAQVEKLAKVEDVRLDPSVNVFVWSR 57
>UniRef50_UPI00005A550D Cluster: PREDICTED: similar to ribosomal
protein L31; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L31 - Canis familiaris
Length = 141
Score = 47.6 bits (108), Expect = 1e-04
Identities = 19/34 (55%), Positives = 25/34 (73%)
Frame = +3
Query: 141 GFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNK 242
GF++ P +KEIRKFA K+MGTPD+ +D NK
Sbjct: 49 GFREACPSGLKEIRKFAMKEMGTPDVHMDPGFNK 82
Score = 32.7 bits (71), Expect = 3.3
Identities = 23/75 (30%), Positives = 31/75 (41%), Gaps = 1/75 (1%)
Frame = +2
Query: 149 KACPKSNQRNPKVR*KTDGNSGHSSRHSLKQIPLV*GVRN-VPFXXXXXXXXXXNDDEDS 325
+ACP + K K G + G+RN VP +DEDS
Sbjct: 52 EACPSGLKEIRKFAMKEMGTPDVHMDPGFNKAVQAEGIRNNVPHRIPVRLSRKCKEDEDS 111
Query: 326 AHKLFTLVTYVPVAS 370
+KL+ LVT VPV +
Sbjct: 112 PNKLYRLVTCVPVTT 126
>UniRef50_P54009 Cluster: 50S ribosomal protein L31e; n=7;
Euryarchaeota|Rep: 50S ribosomal protein L31e -
Methanococcus jannaschii
Length = 87
Score = 45.2 bits (102), Expect = 6e-04
Identities = 21/60 (35%), Positives = 36/60 (60%)
Frame = +3
Query: 99 REYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFLWSRESEMFPS 278
R YT+ L ++ KRAPRAIK+I++F ++ M +++D LN+ +W R + P+
Sbjct: 9 RIYTIPLRDVINKSVRTKRAPRAIKKIKQFLKRHMKAEIVKIDNELNEKIWERGIQKPPA 68
>UniRef50_Q98RR6 Cluster: 60S ribosomal protein L31; n=1; Guillardia
theta|Rep: 60S ribosomal protein L31 - Guillardia theta
(Cryptomonas phi)
Length = 97
Score = 44.8 bits (101), Expect = 8e-04
Identities = 24/55 (43%), Positives = 32/55 (58%)
Frame = +3
Query: 114 NLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFLWSRESEMFPS 278
N+HKR+ G F KR AIKEI+KFA K +IR++ LN + S S P+
Sbjct: 15 NIHKRVFGKKFNKRVSIAIKEIKKFAWKLTKCNNIRIEPELNMQICSNGSSNPPN 69
>UniRef50_Q74MC9 Cluster: NEQ364; n=1; Nanoarchaeum equitans|Rep:
NEQ364 - Nanoarchaeum equitans
Length = 79
Score = 43.2 bits (97), Expect = 0.002
Identities = 19/59 (32%), Positives = 31/59 (52%)
Frame = +3
Query: 102 EYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFLWSRESEMFPS 278
EYTVNL K + KR +A+K +++F + +++ LNKF+W R P+
Sbjct: 2 EYTVNLRKAVLVTSRFKRTKKAVKALKEFVMRHTKAKIVKISQELNKFIWKRGGRKPPT 60
>UniRef50_Q9YD25 Cluster: 50S ribosomal protein L31e; n=1; Aeropyrum
pernix|Rep: 50S ribosomal protein L31e - Aeropyrum
pernix
Length = 104
Score = 42.3 bits (95), Expect = 0.004
Identities = 19/58 (32%), Positives = 34/58 (58%)
Frame = +3
Query: 105 YTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFLWSRESEMFPS 278
Y VNL +R++ +RA RA++ +R+F + ++ +D LN ++WSR E P+
Sbjct: 9 YVVNL-RRVYWGRRTRRAIRAVRMVREFVRRHTKADEVVIDNELNNYIWSRSREKPPA 65
>UniRef50_UPI00015BAD97 Cluster: LSU ribosomal protein L31E; n=1;
Ignicoccus hospitalis KIN4/I|Rep: LSU ribosomal protein
L31E - Ignicoccus hospitalis KIN4/I
Length = 101
Score = 41.5 bits (93), Expect = 0.007
Identities = 19/52 (36%), Positives = 32/52 (61%), Gaps = 2/52 (3%)
Frame = +3
Query: 105 YTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGT--PDIRVDTRLNKFLWS 254
YT+NL +RL+ RA RA++ +R+F + G D+++D +N +LWS
Sbjct: 10 YTINL-RRLYWGRRSNRAKRAVRMVREFVARHFGVEPEDVKIDNTVNNYLWS 60
>UniRef50_Q8U3S7 Cluster: 50S ribosomal protein L31e; n=5;
Thermococcaceae|Rep: 50S ribosomal protein L31e -
Pyrococcus furiosus
Length = 95
Score = 40.7 bits (91), Expect = 0.013
Identities = 20/58 (34%), Positives = 33/58 (56%)
Frame = +3
Query: 105 YTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFLWSRESEMFPS 278
+TV + K V KRAPRA+K +R+F + ++ +D ++N+ +W R E PS
Sbjct: 11 FTVPIKKIKKIVPRWKRAPRAVKFVREFVARHAKAQEVIIDPKVNEKIWERGIEKPPS 68
>UniRef50_A2X8Z3 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (indica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. indica
(Rice)
Length = 93
Score = 40.3 bits (90), Expect = 0.017
Identities = 16/18 (88%), Positives = 18/18 (100%)
Frame = +3
Query: 84 NEVVTREYTVNLHKRLHG 137
+EVVTREYT+NLHKRLHG
Sbjct: 13 DEVVTREYTINLHKRLHG 30
>UniRef50_Q8PYQ4 Cluster: 50S ribosomal protein L31e; n=11;
Euryarchaeota|Rep: 50S ribosomal protein L31e -
Methanosarcina mazei (Methanosarcina frisia)
Length = 93
Score = 40.3 bits (90), Expect = 0.017
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Frame = +3
Query: 69 GKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGT--PDIRVDTRLNK 242
GK A + V + YT+ L + + V KRA RA+KE+R F + M T +++D +N+
Sbjct: 3 GKMADDMVKEQIYTIPL-REVRKVPAWKRAGRAVKEVRGFLVRHMKTEAEQVKLDKTINE 61
Query: 243 FLWSRESEMFP 275
LW + E P
Sbjct: 62 CLWEKGCEKPP 72
>UniRef50_O28213 Cluster: 50S ribosomal protein L31e; n=1;
Archaeoglobus fulgidus|Rep: 50S ribosomal protein L31e -
Archaeoglobus fulgidus
Length = 88
Score = 39.5 bits (88), Expect = 0.029
Identities = 20/65 (30%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Frame = +3
Query: 90 VVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTP--DIRVDTRLNKFLWSRES 263
VV R Y++ L ++ RA +A K +RKF + M ++++DT +N+ +W R +
Sbjct: 5 VVERVYSIRLRHKMKRYPRWLRAKKAAKYVRKFLSRHMKVEPENVKIDTAVNEKIWERGA 64
Query: 264 EMFPS 278
E P+
Sbjct: 65 EKPPT 69
>UniRef50_A3DNH4 Cluster: 50S ribosomal protein L31e; n=2;
Desulfurococcales|Rep: 50S ribosomal protein L31e -
Staphylothermus marinus (strain ATCC 43588 / DSM 3639 /
F1)
Length = 102
Score = 35.5 bits (78), Expect = 0.47
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Frame = +3
Query: 93 VTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPD-IRVDTRLNKFLWSRESEM 269
+TR V KR++ RA RA++ IRK+ + + I +D +N+++WSR E
Sbjct: 7 ITRSIHVIPLKRVYWGRRTNRADRAVRLIRKYVRRHFKEAEKIIIDPAVNEYVWSRSREK 66
Query: 270 FP 275
P
Sbjct: 67 PP 68
>UniRef50_A0CQV2 Cluster: Chromosome undetermined scaffold_24, whole
genome shotgun sequence; n=9; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_24,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 372
Score = 34.7 bits (76), Expect = 0.82
Identities = 17/54 (31%), Positives = 27/54 (50%)
Frame = +2
Query: 230 SLKQIPLV*GVRNVPFXXXXXXXXXXNDDEDSAHKLFTLVTYVPVASIKGLQTE 391
SL + G+RN+P +++D K +TL +VPV + GL+TE
Sbjct: 314 SLNEAVWARGIRNLPRRIRVRLQRKKKEEDDGKGKYYTLAQHVPVDTFDGLKTE 367
>UniRef50_A0RW54 Cluster: Ribosomal protein L31E; n=2;
Thermoprotei|Rep: Ribosomal protein L31E - Cenarchaeum
symbiosum
Length = 217
Score = 34.7 bits (76), Expect = 0.82
Identities = 20/53 (37%), Positives = 29/53 (54%)
Frame = +3
Query: 99 REYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFLWSR 257
R YT+ L K L +RA RAI I++FA M +IR+D ++ +W R
Sbjct: 7 RVYTIPLGKVLLSPD-NRRAMRAINMIKEFATHHMKNANIRIDEEVSHQIWLR 58
>UniRef50_A2EKX9 Cluster: Ribosomal protein L31e, putative; n=6;
Trichomonas vaginalis G3|Rep: Ribosomal protein L31e,
putative - Trichomonas vaginalis G3
Length = 133
Score = 33.1 bits (72), Expect = 2.5
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = +2
Query: 314 DEDSAHKLFTLVTYVPVASIKGLQTENV 397
DE+ A K+ T+ +Y VAS GLQT+ V
Sbjct: 103 DEEDAEKMVTIASYKNVASFNGLQTQKV 130
>UniRef50_Q02B40 Cluster: HAD-superfamily hydrolase, subfamily IA,
variant 3; n=1; Solibacter usitatus Ellin6076|Rep:
HAD-superfamily hydrolase, subfamily IA, variant 3 -
Solibacter usitatus (strain Ellin6076)
Length = 202
Score = 32.7 bits (71), Expect = 3.3
Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +3
Query: 105 YTV-NLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFLWS 254
YT + KRL G G +R + E R F E+ T D+RVD +WS
Sbjct: 31 YTAAEIPKRLAGTGLVERFETGLMEPRDFVEEMSRTLDLRVDYDQFSQIWS 81
>UniRef50_Q820F4 Cluster: Holliday junction ATP-dependent DNA
helicase ruvA; n=6; Actinomycetales|Rep: Holliday
junction ATP-dependent DNA helicase ruvA - Streptomyces
avermitilis
Length = 203
Score = 31.5 bits (68), Expect = 7.7
Identities = 22/67 (32%), Positives = 30/67 (44%), Gaps = 3/67 (4%)
Frame = +3
Query: 27 KLXMTMAKPXGERKGKS--AINEVVTREYTVNLHKRLHGVGFKKR-APRAIKEIRKFAEK 197
KL + + GE G AI VT + LH L G+G+ R A A+ + AE
Sbjct: 122 KLLLELKDRLGEPLGTGGPAIGRAVTTGWREQLHAALIGLGYATREADEAVAAVAPQAEA 181
Query: 198 QMGTPDI 218
GTP +
Sbjct: 182 AGGTPQV 188
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 380,714,217
Number of Sequences: 1657284
Number of extensions: 6574527
Number of successful extensions: 12381
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 12150
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12377
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 20653970351
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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