Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV31053.Seq
(668 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q3UA25 Cluster: Bone marrow macrophage cDNA, RIKEN full... 142 5e-33
UniRef50_P62241 Cluster: 40S ribosomal protein S8; n=93; Eukaryo... 142 5e-33
UniRef50_Q5JR95 Cluster: Ribosomal protein S8; n=8; Euteleostomi... 141 2e-32
UniRef50_Q8MLY8 Cluster: 40S ribosomal protein S8; n=82; Eukaryo... 128 1e-28
UniRef50_A6RAQ0 Cluster: Ribosomal protein S8; n=1; Ajellomyces ... 110 3e-23
UniRef50_Q08069 Cluster: 40S ribosomal protein S8; n=21; Eukaryo... 110 3e-23
UniRef50_Q4N3P0 Cluster: 40S ribosomal protein S8; n=4; Eukaryot... 109 4e-23
UniRef50_P25204 Cluster: 40S ribosomal protein S8; n=19; Eukaryo... 96 8e-19
UniRef50_UPI000049933B Cluster: conserved hypothetical protein; ... 93 4e-18
UniRef50_Q6QP50 Cluster: Putative 40S ribosomal protein S8; n=1;... 82 1e-14
UniRef50_Q5C1R4 Cluster: SJCHGC03085 protein; n=1; Schistosoma j... 78 2e-13
UniRef50_Q4SV68 Cluster: Chromosome undetermined SCAF13783, whol... 75 1e-12
UniRef50_Q7R1W8 Cluster: Ribosomal protein S8; n=1; Giardia lamb... 71 3e-11
UniRef50_Q8SWC9 Cluster: Ribosomal protein S8; n=1; Encephalitoz... 68 2e-10
UniRef50_Q9AW20 Cluster: 40S ribosomal protein S8; n=1; Guillard... 68 2e-10
UniRef50_Q6L0D3 Cluster: 30S ribosomal protein S8e; n=7; Archaea... 60 4e-08
UniRef50_Q3LVX9 Cluster: Ribosomal protein S8; n=1; Bigelowiella... 49 1e-04
UniRef50_A3CSQ2 Cluster: 30S ribosomal protein S8e; n=5; Archaea... 48 2e-04
UniRef50_Q9HJD0 Cluster: 30S ribosomal protein S8e; n=5; Euryarc... 48 2e-04
UniRef50_Q8TV55 Cluster: 30S ribosomal protein S8e; n=1; Methano... 46 8e-04
UniRef50_Q0W1L5 Cluster: 30S ribosomal protein S8e; n=3; Euryarc... 42 0.010
UniRef50_O58830 Cluster: 30S ribosomal protein S8e; n=6; Archaea... 41 0.024
UniRef50_Q980W3 Cluster: 30S ribosomal protein S8e; n=4; Archaea... 41 0.031
UniRef50_A0RXG5 Cluster: Ribosomal protein S8E; n=2; Thermoprote... 38 0.29
UniRef50_A7Q5T2 Cluster: Chromosome chr14 scaffold_54, whole gen... 37 0.38
UniRef50_P61300 Cluster: 30S ribosomal protein S8e; n=5; Methano... 37 0.38
UniRef50_Q2W531 Cluster: TPR repeat; n=3; Magnetospirillum|Rep: ... 37 0.51
UniRef50_Q9VL72 Cluster: CG5899-PA, isoform A; n=5; Diptera|Rep:... 36 0.67
UniRef50_Q9YDY0 Cluster: 30S ribosomal protein S8e; n=3; Desulfu... 36 0.67
UniRef50_Q1Q3S6 Cluster: Putative uncharacterized protein; n=1; ... 35 2.0
UniRef50_Q2NEU6 Cluster: 30S ribosomal protein S8e; n=1; Methano... 33 4.7
UniRef50_Q387A6 Cluster: Phosphatidylinositol (3,5) kinase, puta... 33 6.2
UniRef50_UPI0000F32D0C Cluster: Zinc finger CCCH domain-containi... 33 8.2
UniRef50_Q89D60 Cluster: Blr7583 protein; n=1; Bradyrhizobium ja... 33 8.2
UniRef50_A5V4W5 Cluster: TonB-dependent receptor precursor; n=1;... 33 8.2
UniRef50_A5E7M6 Cluster: Putative uncharacterized protein; n=1; ... 33 8.2
UniRef50_Q92347 Cluster: Pumilio domain-containing protein C6G9.... 33 8.2
UniRef50_O60706 Cluster: ATP-binding cassette transporter sub-fa... 33 8.2
>UniRef50_Q3UA25 Cluster: Bone marrow macrophage cDNA, RIKEN
full-length enriched library, clone:I830031J02
product:ribosomal protein S8, full insert sequence; n=9;
Deuterostomia|Rep: Bone marrow macrophage cDNA, RIKEN
full-length enriched library, clone:I830031J02
product:ribosomal protein S8, full insert sequence - Mus
musculus (Mouse)
Length = 152
Score = 142 bits (345), Expect = 5e-33
Identities = 62/75 (82%), Positives = 67/75 (89%)
Frame = +1
Query: 31 MGISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRL 210
MGISRD+WHKRR TGGKR P KKRKYELGRPAANT++GP+RIH+VR RGGN KYRALRL
Sbjct: 1 MGISRDNWHKRRKTGGKRKPYHKKRKYELGRPAANTKIGPRRIHTVRVRGGNKKYRALRL 60
Query: 211 DTGNFSWGSECSTRK 255
D GNFSWGSEC TRK
Sbjct: 61 DVGNFSWGSECCTRK 75
Score = 132 bits (320), Expect = 6e-30
Identities = 60/75 (80%), Positives = 68/75 (90%)
Frame = +3
Query: 252 QTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEE 431
+TRIIDVVYNASNNELVRTKTLVKN IV++D+TP+RQWYESHY LPLGRKKGAKLT EE
Sbjct: 75 KTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQWYESHYALPLGRKKGAKLTPEEE 134
Query: 432 AIINKKRSQKTARKY 476
I+NKKRS+K +KY
Sbjct: 135 EILNKKRSKKIQKKY 149
>UniRef50_P62241 Cluster: 40S ribosomal protein S8; n=93;
Eukaryota|Rep: 40S ribosomal protein S8 - Homo sapiens
(Human)
Length = 208
Score = 142 bits (345), Expect = 5e-33
Identities = 62/75 (82%), Positives = 67/75 (89%)
Frame = +1
Query: 31 MGISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRL 210
MGISRD+WHKRR TGGKR P KKRKYELGRPAANT++GP+RIH+VR RGGN KYRALRL
Sbjct: 1 MGISRDNWHKRRKTGGKRKPYHKKRKYELGRPAANTKIGPRRIHTVRVRGGNKKYRALRL 60
Query: 211 DTGNFSWGSECSTRK 255
D GNFSWGSEC TRK
Sbjct: 61 DVGNFSWGSECCTRK 75
Score = 141 bits (341), Expect = 2e-32
Identities = 66/95 (69%), Positives = 78/95 (82%)
Frame = +3
Query: 252 QTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEE 431
+TRIIDVVYNASNNELVRTKTLVKN IV++D+TP+RQWYESHY LPLGRKKGAKLT EE
Sbjct: 75 KTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQWYESHYALPLGRKKGAKLTPEEE 134
Query: 432 AIINKKRSQKTARKYLARQRLAKVEGL*KSNSTQG 536
I+NKKRS+K +KY R++ AK+ L + QG
Sbjct: 135 EILNKKRSKKIQKKYDERKKNAKISSLLEEQFQQG 169
Score = 90.2 bits (214), Expect = 4e-17
Identities = 43/68 (63%), Positives = 52/68 (76%)
Frame = +2
Query: 449 EKSKDSKKILGKATSC*G*GALEEQFHTGRLLACVASRPGQCGRADGYILEGKELEFYLR 628
+K D +K K +S LEEQF G+LLAC+ASRPGQCGRADGY+LEGKELEFYLR
Sbjct: 146 QKKYDERKKNAKISSL-----LEEQFQQGKLLACIASRPGQCGRADGYVLEGKELEFYLR 200
Query: 629 KIKSKRAK 652
KIK+++ K
Sbjct: 201 KIKARKGK 208
>UniRef50_Q5JR95 Cluster: Ribosomal protein S8; n=8;
Euteleostomi|Rep: Ribosomal protein S8 - Homo sapiens
(Human)
Length = 188
Score = 141 bits (341), Expect = 2e-32
Identities = 66/95 (69%), Positives = 78/95 (82%)
Frame = +3
Query: 252 QTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEE 431
+TRIIDVVYNASNNELVRTKTLVKN IV++D+TP+RQWYESHY LPLGRKKGAKLT EE
Sbjct: 55 KTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQWYESHYALPLGRKKGAKLTPEEE 114
Query: 432 AIINKKRSQKTARKYLARQRLAKVEGL*KSNSTQG 536
I+NKKRS+K +KY R++ AK+ L + QG
Sbjct: 115 EILNKKRSKKIQKKYDERKKNAKISSLLEEQFQQG 149
Score = 97.9 bits (233), Expect = 2e-19
Identities = 42/54 (77%), Positives = 48/54 (88%)
Frame = +1
Query: 31 MGISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTK 192
MGISRD+WHKRR TGGKR P KKRKYELGRPAANT++GP+RIH+VR RGG T+
Sbjct: 1 MGISRDNWHKRRKTGGKRKPYHKKRKYELGRPAANTKIGPRRIHTVRVRGGCTR 54
Score = 90.2 bits (214), Expect = 4e-17
Identities = 43/68 (63%), Positives = 52/68 (76%)
Frame = +2
Query: 449 EKSKDSKKILGKATSC*G*GALEEQFHTGRLLACVASRPGQCGRADGYILEGKELEFYLR 628
+K D +K K +S LEEQF G+LLAC+ASRPGQCGRADGY+LEGKELEFYLR
Sbjct: 126 QKKYDERKKNAKISSL-----LEEQFQQGKLLACIASRPGQCGRADGYVLEGKELEFYLR 180
Query: 629 KIKSKRAK 652
KIK+++ K
Sbjct: 181 KIKARKGK 188
>UniRef50_Q8MLY8 Cluster: 40S ribosomal protein S8; n=82;
Eukaryota|Rep: 40S ribosomal protein S8 - Drosophila
melanogaster (Fruit fly)
Length = 208
Score = 128 bits (309), Expect = 1e-28
Identities = 61/97 (62%), Positives = 74/97 (76%), Gaps = 2/97 (2%)
Frame = +3
Query: 252 QTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEE 431
+TRI DVVYNASNNELVRTKTLVKN+IVV+DATPFRQWYE+HY LPLGRK+ K + E+
Sbjct: 75 KTRIADVVYNASNNELVRTKTLVKNSIVVIDATPFRQWYEAHYVLPLGRKRNPKHAQKED 134
Query: 432 A--IINKKRSQKTARKYLARQRLAKVEGL*KSNSTQG 536
++ KKRS+K +KYL RQ+ KVE + T G
Sbjct: 135 ENDVLTKKRSEKVMKKYLERQKYGKVEQALEDQFTSG 171
Score = 122 bits (294), Expect = 8e-27
Identities = 56/75 (74%), Positives = 63/75 (84%)
Frame = +1
Query: 31 MGISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRL 210
MGISRD HKRRATGGKR +RKKRK+ELGRPAANT+LG R+H VR+RGGNTK RALRL
Sbjct: 1 MGISRDSAHKRRATGGKRKSLRKKRKFELGRPAANTKLGSGRVHKVRTRGGNTKLRALRL 60
Query: 211 DTGNFSWGSECSTRK 255
+TGNF+W SE RK
Sbjct: 61 ETGNFAWASEGVARK 75
Score = 87.8 bits (208), Expect = 2e-16
Identities = 37/46 (80%), Positives = 45/46 (97%)
Frame = +2
Query: 509 ALEEQFHTGRLLACVASRPGQCGRADGYILEGKELEFYLRKIKSKR 646
ALE+QF +GR+LAC++SRPGQCGR+DGYILEGKELEFYL+KIKSK+
Sbjct: 163 ALEDQFTSGRILACISSRPGQCGRSDGYILEGKELEFYLKKIKSKK 208
>UniRef50_A6RAQ0 Cluster: Ribosomal protein S8; n=1; Ajellomyces
capsulatus NAm1|Rep: Ribosomal protein S8 - Ajellomyces
capsulatus NAm1
Length = 141
Score = 110 bits (265), Expect = 3e-23
Identities = 51/75 (68%), Positives = 59/75 (78%)
Frame = +1
Query: 31 MGISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRL 210
MGISRD HKR ATG KR+ RKKR +E GR ANTR+GP+RIH VR+RGGN K+R LRL
Sbjct: 1 MGISRDSRHKRSATGAKRSHYRKKRAFEKGRQPANTRIGPKRIHLVRTRGGNQKFRGLRL 60
Query: 211 DTGNFSWGSECSTRK 255
++GNFSWGSE RK
Sbjct: 61 ESGNFSWGSEGIARK 75
Score = 65.3 bits (152), Expect = 1e-09
Identities = 30/43 (69%), Positives = 34/43 (79%)
Frame = +2
Query: 509 ALEEQFHTGRLLACVASRPGQCGRADGYILEGKELEFYLRKIK 637
ALE+QF GRL A V+SRPGQ GR DGYILEG+EL FY R I+
Sbjct: 98 ALEKQFEAGRLYAVVSSRPGQSGRVDGYILEGEELAFYQRAIR 140
>UniRef50_Q08069 Cluster: 40S ribosomal protein S8; n=21;
Eukaryota|Rep: 40S ribosomal protein S8 - Zea mays
(Maize)
Length = 221
Score = 110 bits (264), Expect = 3e-23
Identities = 53/76 (69%), Positives = 59/76 (77%), Gaps = 1/76 (1%)
Frame = +1
Query: 31 MGISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTRLGPQR-IHSVRSRGGNTKYRALR 207
MGISRD HKRRATGGK+ RKKRKYELGR ANT+L + + VR RGGN K+RALR
Sbjct: 1 MGISRDSMHKRRATGGKQKAWRKKRKYELGRQPANTKLSSNKTVRRVRVRGGNVKWRALR 60
Query: 208 LDTGNFSWGSECSTRK 255
LDTGN+SWGSE TRK
Sbjct: 61 LDTGNYSWGSEAVTRK 76
Score = 88.2 bits (209), Expect = 2e-16
Identities = 45/89 (50%), Positives = 59/89 (66%), Gaps = 3/89 (3%)
Frame = +3
Query: 252 QTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKK---GAKLTE 422
+TRI+DVVYNASNNELVRT+TLVK+AIV VDA PF+QWY +HY + +GRKK AK
Sbjct: 76 KTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLTHYGVDIGRKKKTPAAKKDN 135
Query: 423 AEEAIINKKRSQKTARKYLARQRLAKVEG 509
AE + + ++ R+ + EG
Sbjct: 136 AEGQEVEAAAEETKKSNHVTRKLEKRKEG 164
Score = 85.4 bits (202), Expect = 1e-15
Identities = 35/47 (74%), Positives = 44/47 (93%)
Frame = +2
Query: 512 LEEQFHTGRLLACVASRPGQCGRADGYILEGKELEFYLRKIKSKRAK 652
+EEQF +GRLLAC++SRPGQCGRADGYILEGKELEFY++K++ K+ K
Sbjct: 171 IEEQFGSGRLLACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGK 217
>UniRef50_Q4N3P0 Cluster: 40S ribosomal protein S8; n=4;
Eukaryota|Rep: 40S ribosomal protein S8 - Theileria
parva
Length = 188
Score = 109 bits (263), Expect = 4e-23
Identities = 50/75 (66%), Positives = 60/75 (80%)
Frame = +1
Query: 31 MGISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRL 210
MGISRD HKRR TGG+ +KKRKYELGRP++NT+LG + + VR RGGN K+RALRL
Sbjct: 1 MGISRDSRHKRRLTGGRYPVHKKKRKYELGRPSSNTKLGSKLVRKVRCRGGNLKFRALRL 60
Query: 211 DTGNFSWGSECSTRK 255
D+GNFSWGS+ TRK
Sbjct: 61 DSGNFSWGSQNVTRK 75
Score = 81.4 bits (192), Expect = 2e-14
Identities = 35/49 (71%), Positives = 44/49 (89%)
Frame = +3
Query: 252 QTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGR 398
+TR++DVVYNAS+NELVRTKTLVKNAIV VD TPF+ W+++HY L LG+
Sbjct: 75 KTRVMDVVYNASSNELVRTKTLVKNAIVTVDPTPFKLWFKTHYGLELGK 123
Score = 72.1 bits (169), Expect = 1e-11
Identities = 29/45 (64%), Positives = 38/45 (84%)
Frame = +2
Query: 512 LEEQFHTGRLLACVASRPGQCGRADGYILEGKELEFYLRKIKSKR 646
L +QF +GRLLAC++SRPGQCGR DGY+LEG+EL FY R++ K+
Sbjct: 142 LLDQFSSGRLLACISSRPGQCGRCDGYVLEGEELNFYRRRMDKKK 186
>UniRef50_P25204 Cluster: 40S ribosomal protein S8; n=19;
Eukaryota|Rep: 40S ribosomal protein S8 - Leishmania
major
Length = 220
Score = 95.9 bits (228), Expect = 8e-19
Identities = 50/93 (53%), Positives = 61/93 (65%)
Frame = +1
Query: 31 MGISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRL 210
MGI R HKR+ TGGK RK+ K ELGR ANTRLG +R+ VR+RGGN K RALRL
Sbjct: 1 MGIVRSRLHKRKITGGKTKIHRKRMKAELGRLPANTRLGARRVSPVRARGGNFKIRALRL 60
Query: 211 DTGNFSWGSECSTRKPVSLMLCIMHLTMNWCVQ 309
DTGNF+W SE + V L+ + + T N V+
Sbjct: 61 DTGNFAWASEAIAHR-VRLLDVVYNATSNELVR 92
Score = 79.4 bits (187), Expect = 7e-14
Identities = 41/86 (47%), Positives = 54/86 (62%), Gaps = 1/86 (1%)
Frame = +3
Query: 252 QTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYTLPL-GRKKGAKLTEAE 428
+ R++DVVYNA++NELVRTKTLVKN IV VDA PF++WY HY + L KK K A
Sbjct: 75 RVRLLDVVYNATSNELVRTKTLVKNCIVAVDAAPFKRWYAKHYGIDLDADKKSTKAAVAA 134
Query: 429 EAIINKKRSQKTARKYLARQRLAKVE 506
E +K + A KY + K++
Sbjct: 135 EK-KGRKSAHAAADKYDVNKASPKLQ 159
Score = 60.9 bits (141), Expect = 3e-08
Identities = 25/46 (54%), Positives = 36/46 (78%)
Frame = +2
Query: 509 ALEEQFHTGRLLACVASRPGQCGRADGYILEGKELEFYLRKIKSKR 646
A+ +Q GR+LA + SRPGQ GRADG +LEG EL+FYL++++ K+
Sbjct: 174 AIADQLREGRVLARITSRPGQSGRADGILLEGAELQFYLKRLEKKK 219
>UniRef50_UPI000049933B Cluster: conserved hypothetical protein;
n=3; Entamoeba histolytica HM-1:IMSS|Rep: conserved
hypothetical protein - Entamoeba histolytica HM-1:IMSS
Length = 237
Score = 93.5 bits (222), Expect = 4e-18
Identities = 44/74 (59%), Positives = 54/74 (72%)
Frame = +1
Query: 31 MGISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRL 210
MGI+RD HKRRATGGK+ ++KK+K +GR ANTRLG R+H VR R G K RALRL
Sbjct: 1 MGITRDSRHKRRATGGKKNSMQKKKKNTMGRQPANTRLGAIRVHDVRCRYGIIKRRALRL 60
Query: 211 DTGNFSWGSECSTR 252
+ GNFSW S+ T+
Sbjct: 61 ENGNFSWASQSITK 74
Score = 67.7 bits (158), Expect = 2e-10
Identities = 29/46 (63%), Positives = 37/46 (80%)
Frame = +2
Query: 509 ALEEQFHTGRLLACVASRPGQCGRADGYILEGKELEFYLRKIKSKR 646
AL E F +GR+LAC++SRPGQ G +GYILEGKEL+FY +KI K+
Sbjct: 191 ALLEGFQSGRVLACISSRPGQTGSVEGYILEGKELDFYSKKISDKK 236
Score = 58.4 bits (135), Expect = 1e-07
Identities = 31/82 (37%), Positives = 46/82 (56%), Gaps = 4/82 (4%)
Frame = +3
Query: 255 TRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEEA 434
T+I++VVYNAS+N+ VRT TLVK AI+ +D PFR W+ Y + K E+
Sbjct: 76 TKILNVVYNASDNDFVRTNTLVKGAIIEIDPAPFRLWFLKFYGKDIASTDYYKSLESATF 135
Query: 435 IINKK----RSQKTARKYLARQ 488
KK + ++ K +A+Q
Sbjct: 136 KTEKKVVVPKEEENKEKTIAQQ 157
>UniRef50_Q6QP50 Cluster: Putative 40S ribosomal protein S8; n=1;
Zea mays|Rep: Putative 40S ribosomal protein S8 - Zea
mays (Maize)
Length = 245
Score = 82.2 bits (194), Expect = 1e-14
Identities = 36/60 (60%), Positives = 49/60 (81%)
Frame = +3
Query: 252 QTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEE 431
+TRI+DVVY A+NNELVRT+TLVK+AIV VDA PF+QWY +HY + +GRKK + + ++
Sbjct: 173 KTRILDVVYIATNNELVRTQTLVKSAIVQVDAAPFKQWYLTHYGVDIGRKKKVSVAKKDD 232
Score = 73.3 bits (172), Expect = 5e-12
Identities = 36/75 (48%), Positives = 52/75 (69%), Gaps = 1/75 (1%)
Frame = +1
Query: 76 GKRAPIRKKRKYELGRPAANTRLGPQR-IHSVRSRGGNTKYRALRLDTGNFSWGSECSTR 252
G P+++++ YELGR ANT+L + + VR RGGNTK+RALR DT N+SWGSE TR
Sbjct: 113 GPFCPLQEEQGYELGRQPANTKLSSNKTVRRVRVRGGNTKWRALRFDTCNYSWGSEALTR 172
Query: 253 KPVSLMLCIMHLTMN 297
K + +L ++++ N
Sbjct: 173 K--TRILDVVYIATN 185
>UniRef50_Q5C1R4 Cluster: SJCHGC03085 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC03085 protein - Schistosoma
japonicum (Blood fluke)
Length = 120
Score = 78.2 bits (184), Expect = 2e-13
Identities = 32/48 (66%), Positives = 44/48 (91%)
Frame = +2
Query: 509 ALEEQFHTGRLLACVASRPGQCGRADGYILEGKELEFYLRKIKSKRAK 652
+L+E+F TGRLLAC++S+PGQ GRADGY+ EGKELEF+ +K+K+K+AK
Sbjct: 73 SLKEEFVTGRLLACISSKPGQVGRADGYLFEGKELEFFSKKLKAKKAK 120
Score = 46.0 bits (104), Expect = 8e-04
Identities = 27/65 (41%), Positives = 36/65 (55%), Gaps = 7/65 (10%)
Frame = +3
Query: 321 KNAIVVVDATPFRQWYESHYTLPLGR-----KKGAKLT--EAEEAIINKKRSQKTARKYL 479
K+AIV + PFRQW+E+ Y LG KKG +T EE + KKRS+ +K+
Sbjct: 1 KSAIVQIGGAPFRQWFEAPYLKELGPPKVVCKKGPSVTPENPEEDFLLKKRSKSALKKFE 60
Query: 480 ARQRL 494
RQ L
Sbjct: 61 TRQAL 65
>UniRef50_Q4SV68 Cluster: Chromosome undetermined SCAF13783, whole
genome shotgun sequence; n=2; Coelomata|Rep: Chromosome
undetermined SCAF13783, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 149
Score = 75.4 bits (177), Expect = 1e-12
Identities = 32/36 (88%), Positives = 35/36 (97%)
Frame = +2
Query: 545 ACVASRPGQCGRADGYILEGKELEFYLRKIKSKRAK 652
AC+ASRPGQCGRADGYILEGKELEFYLRKIK+K+ K
Sbjct: 114 ACIASRPGQCGRADGYILEGKELEFYLRKIKAKKGK 149
>UniRef50_Q7R1W8 Cluster: Ribosomal protein S8; n=1; Giardia lamblia
ATCC 50803|Rep: Ribosomal protein S8 - Giardia lamblia
ATCC 50803
Length = 174
Score = 70.5 bits (165), Expect = 3e-11
Identities = 42/102 (41%), Positives = 57/102 (55%), Gaps = 9/102 (8%)
Frame = +1
Query: 31 MGISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTRL---------GPQRIHSVRSRGG 183
MGI+ D +KR TG + KKRKY LGR ANT+L Q+I ++R RGG
Sbjct: 1 MGITHDKMYKRSKTGAVQGKWHKKRKYNLGRQPANTKLIVKVTSKKNEGQKISTIRCRGG 60
Query: 184 NTKYRALRLDTGNFSWGSECSTRKPVSLMLCIMHLTMNWCVQ 309
N K RALRL G+F+WGS + K ++ + + T N V+
Sbjct: 61 NIKRRALRLSHGSFAWGSADISHK-ARILQVVYNSTSNELVR 101
Score = 50.8 bits (116), Expect = 3e-05
Identities = 23/42 (54%), Positives = 29/42 (69%)
Frame = +2
Query: 518 EQFHTGRLLACVASRPGQCGRADGYILEGKELEFYLRKIKSK 643
+Q +LA ++SRPGQ G ADGYILEG EL FY +K+ K
Sbjct: 133 DQIRGDHILARISSRPGQVGTADGYILEGPELLFYQKKLAPK 174
Score = 50.0 bits (114), Expect = 5e-05
Identities = 21/43 (48%), Positives = 31/43 (72%)
Frame = +3
Query: 231 GIGMFNSQTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFR 359
G + + RI+ VVYN+++NELVRT TLVK +V +D+ PF+
Sbjct: 77 GSADISHKARILQVVYNSTSNELVRTNTLVKGCVVQIDSAPFK 119
>UniRef50_Q8SWC9 Cluster: Ribosomal protein S8; n=1; Encephalitozoon
cuniculi|Rep: Ribosomal protein S8 - Encephalitozoon
cuniculi
Length = 173
Score = 68.1 bits (159), Expect = 2e-10
Identities = 37/93 (39%), Positives = 53/93 (56%)
Frame = +1
Query: 31 MGISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRL 210
MGI+ HKRR TG K RKKR G ++T++G +++ VR RGGN KY+ALRL
Sbjct: 1 MGINHRGDHKRRKTGAKAVISRKKRNNRAGSQPSSTKIGERKVTPVRVRGGNRKYKALRL 60
Query: 211 DTGNFSWGSECSTRKPVSLMLCIMHLTMNWCVQ 309
D G+F + + R L+ + H + N V+
Sbjct: 61 DMGHFKFITTGKFRM-AKLLQVVYHPSSNELVR 92
Score = 51.2 bits (117), Expect = 2e-05
Identities = 22/45 (48%), Positives = 28/45 (62%)
Frame = +2
Query: 509 ALEEQFHTGRLLACVASRPGQCGRADGYILEGKELEFYLRKIKSK 643
+L E F G L A + SRPGQ G A G++L+G EL+FY K K
Sbjct: 123 SLHESFEKGHLYAIITSRPGQVGMAQGHVLQGDELKFYADKFNKK 167
Score = 43.2 bits (97), Expect = 0.006
Identities = 17/34 (50%), Positives = 27/34 (79%)
Frame = +3
Query: 258 RIIDVVYNASNNELVRTKTLVKNAIVVVDATPFR 359
+++ VVY+ S+NELVRT TL K+++V + A PF+
Sbjct: 77 KLLQVVYHPSSNELVRTNTLTKSSVVKISAEPFK 110
>UniRef50_Q9AW20 Cluster: 40S ribosomal protein S8; n=1; Guillardia
theta|Rep: 40S ribosomal protein S8 - Guillardia theta
(Cryptomonas phi)
Length = 178
Score = 67.7 bits (158), Expect = 2e-10
Identities = 33/69 (47%), Positives = 47/69 (68%)
Frame = +1
Query: 31 MGISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRL 210
MGI+R+ HKR++TGG ++ RKKR + GR +NT++G + + +R RGG K RAL L
Sbjct: 1 MGINREGLHKRKSTGGLKSCWRKKRNHAKGRQPSNTKIGRRCVVKLRVRGGGVKTRALFL 60
Query: 211 DTGNFSWGS 237
GNFS+ S
Sbjct: 61 SYGNFSFVS 69
Score = 61.3 bits (142), Expect = 2e-08
Identities = 26/44 (59%), Positives = 37/44 (84%)
Frame = +2
Query: 512 LEEQFHTGRLLACVASRPGQCGRADGYILEGKELEFYLRKIKSK 643
L +Q +G++LA + SRPGQ GRADGYILEG+EL+++L+KI+ K
Sbjct: 135 LIDQILSGKILARICSRPGQSGRADGYILEGQELDYFLKKIQKK 178
Score = 37.9 bits (84), Expect = 0.22
Identities = 16/31 (51%), Positives = 23/31 (74%)
Frame = +3
Query: 252 QTRIIDVVYNASNNELVRTKTLVKNAIVVVD 344
+ +I+ V +N S+NELVRT TL K +IV +D
Sbjct: 75 KAKILSVAFNESSNELVRTNTLTKGSIVYLD 105
>UniRef50_Q6L0D3 Cluster: 30S ribosomal protein S8e; n=7;
Archaea|Rep: 30S ribosomal protein S8e - Picrophilus
torridus
Length = 125
Score = 60.5 bits (140), Expect = 4e-08
Identities = 29/65 (44%), Positives = 39/65 (60%)
Frame = +1
Query: 61 RRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSE 240
R+ +GGK P KR+YELGR TRLG + + +RS GGN+K+ LR D N +
Sbjct: 10 RKPSGGKLRPNHSKRRYELGREPTLTRLGDRELRKIRSYGGNSKFALLRCDYANVYNPKD 69
Query: 241 CSTRK 255
+TRK
Sbjct: 70 KTTRK 74
>UniRef50_Q3LVX9 Cluster: Ribosomal protein S8; n=1; Bigelowiella
natans|Rep: Ribosomal protein S8 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 176
Score = 48.8 bits (111), Expect = 1e-04
Identities = 24/59 (40%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Frame = +1
Query: 58 KRRATGGKRAPIRKKRKYELGRPAANTRLGPQR-IHSVRSRGGNTKYRALRLDTGNFSW 231
K++ TGGK+ I KK+ + G NT L I R RGGN K++A+ L G+F W
Sbjct: 3 KKKLTGGKKKKISKKKNHSKGNNPTNTVLRRANFIKMTRVRGGNFKFKAISLGKGSFQW 61
Score = 34.7 bits (76), Expect = 2.0
Identities = 13/37 (35%), Positives = 25/37 (67%)
Frame = +3
Query: 246 NSQTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPF 356
+ ++I+ V+YN +N +LV+ + L K I+ +D+ PF
Sbjct: 67 SKNSKILSVLYNQANLKLVQKRNLSKGTIIKIDSMPF 103
>UniRef50_A3CSQ2 Cluster: 30S ribosomal protein S8e; n=5;
Archaea|Rep: 30S ribosomal protein S8e - Methanoculleus
marisnigri (strain ATCC 35101 / DSM 1498 / JR1)
Length = 125
Score = 48.4 bits (110), Expect = 2e-04
Identities = 25/65 (38%), Positives = 38/65 (58%)
Frame = +1
Query: 61 RRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSE 240
R+ +GG+ + K++ E+GR A T +G +R VR+ GGN K RALRL+ S +
Sbjct: 9 RKPSGGRYHTSQGKKRTEIGRAPAETHIGEERRRIVRTFGGNQKVRALRLEYATVSNPAT 68
Query: 241 CSTRK 255
T+K
Sbjct: 69 GETKK 73
>UniRef50_Q9HJD0 Cluster: 30S ribosomal protein S8e; n=5;
Euryarchaeota|Rep: 30S ribosomal protein S8e -
Thermoplasma acidophilum
Length = 127
Score = 48.0 bits (109), Expect = 2e-04
Identities = 27/66 (40%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Frame = +1
Query: 61 RRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSV-RSRGGNTKYRALRLDTGNFSWGS 237
++ATGG RKKR++ELGR T+LG + V R+ GGNTK +T N S
Sbjct: 10 KKATGGSLKQSRKKRRFELGREPTLTKLGTKTERKVIRTMGGNTKVILFTAETANVYDAS 69
Query: 238 ECSTRK 255
E +K
Sbjct: 70 EKKIKK 75
>UniRef50_Q8TV55 Cluster: 30S ribosomal protein S8e; n=1;
Methanopyrus kandleri|Rep: 30S ribosomal protein S8e -
Methanopyrus kandleri
Length = 133
Score = 46.0 bits (104), Expect = 8e-04
Identities = 23/51 (45%), Positives = 30/51 (58%), Gaps = 4/51 (7%)
Frame = +1
Query: 52 WHKR---RATGGKRAPIRKKRKYELGRPAANTRLGPQR-IHSVRSRGGNTK 192
WH R + TGG+ P RKKRK+E+G P T +G +R + R GGN K
Sbjct: 4 WHGRSLRKPTGGRIRPHRKKRKFEMGNPPTETLVGEERKLKERRGMGGNVK 54
>UniRef50_Q0W1L5 Cluster: 30S ribosomal protein S8e; n=3;
Euryarchaeota|Rep: 30S ribosomal protein S8e -
Uncultured methanogenic archaeon RC-I
Length = 125
Score = 42.3 bits (95), Expect = 0.010
Identities = 23/65 (35%), Positives = 34/65 (52%)
Frame = +1
Query: 61 RRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSE 240
R+ATGG+ R KRK+ELGR +G Q++ + G +K R L+ D N +
Sbjct: 9 RKATGGRLRLNRSKRKFELGRDFTIPVIGAQKLKVLNVTGNGSKVRVLKSDVVNVTDPKT 68
Query: 241 CSTRK 255
T+K
Sbjct: 69 GKTQK 73
>UniRef50_O58830 Cluster: 30S ribosomal protein S8e; n=6;
Archaea|Rep: 30S ribosomal protein S8e - Pyrococcus
horikoshii
Length = 127
Score = 41.1 bits (92), Expect = 0.024
Identities = 21/47 (44%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Frame = +1
Query: 61 RRATGGKRAPIRKKRKYELGRPAANTRLGPQ-RIHSVRSRGGNTKYR 198
++ +GG+ RKKRK ELGR +NTR+ Q + +R+ GGN K R
Sbjct: 10 KKPSGGRIVLARKKRKRELGREPSNTRVAEQDKRKIIRTYGGNRKVR 56
>UniRef50_Q980W3 Cluster: 30S ribosomal protein S8e; n=4;
Archaea|Rep: 30S ribosomal protein S8e - Sulfolobus
solfataricus
Length = 133
Score = 40.7 bits (91), Expect = 0.031
Identities = 23/55 (41%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +1
Query: 61 RRATGGKRAPIRKKRKYELGRPAANTRLGPQRIH-SVRSRGGNTKYRALRLDTGN 222
R+ TGG + R KRKYE+G P T L + I R+ GGN K R T N
Sbjct: 10 RKITGGLKGKHRDKRKYEIGNPPTFTTLSAEDIRIKDRTLGGNFKVRLKYTTTAN 64
>UniRef50_A0RXG5 Cluster: Ribosomal protein S8E; n=2;
Thermoprotei|Rep: Ribosomal protein S8E - Cenarchaeum
symbiosum
Length = 129
Score = 37.5 bits (83), Expect = 0.29
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Frame = +1
Query: 64 RATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFS-WGSE 240
+ TGG+R P+R +RKYE+ R G Q + + RG TK +D N + G++
Sbjct: 12 KLTGGRRHPLRTRRKYEIDRYPNEALSGAQETVTRKVRGKRTKTALKTIDFVNLAVQGAK 71
Query: 241 CSTRKPVSLM 270
K V ++
Sbjct: 72 VKKSKIVKVL 81
>UniRef50_A7Q5T2 Cluster: Chromosome chr14 scaffold_54, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr14 scaffold_54, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 110
Score = 37.1 bits (82), Expect = 0.38
Identities = 27/71 (38%), Positives = 38/71 (53%)
Frame = +3
Query: 294 ELVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEEAIINKKRSQKTARK 473
ELVRT+TLVKNAI+ Q Y HY L +G KK A T ++ +++ RK
Sbjct: 31 ELVRTQTLVKNAII--------QRYLQHYGLDIGCKKKASTTPRKK----ERKGNHVVRK 78
Query: 474 YLARQRLAKVE 506
RQ+ K++
Sbjct: 79 LEKRQQDHKLD 89
>UniRef50_P61300 Cluster: 30S ribosomal protein S8e; n=5;
Methanococcus|Rep: 30S ribosomal protein S8e -
Methanococcus maripaludis
Length = 128
Score = 37.1 bits (82), Expect = 0.38
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Frame = +1
Query: 58 KRRATGGKRAPIRKKRKYELGRPAANTRLGPQ-RIHSVRSRGGNTKYRALRLDTGN 222
+R +TG K KK K E+GRPAA T++ + + VR RG N K + + + N
Sbjct: 9 RRLSTGAKVWRAAKKHKREMGRPAAETQVSDKIKRKIVRCRGANLKVKLEKTNYAN 64
>UniRef50_Q2W531 Cluster: TPR repeat; n=3; Magnetospirillum|Rep: TPR
repeat - Magnetospirillum magneticum (strain AMB-1 /
ATCC 700264)
Length = 556
Score = 36.7 bits (81), Expect = 0.51
Identities = 17/37 (45%), Positives = 21/37 (56%)
Frame = +1
Query: 67 ATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSR 177
A G +RAP K YE R AA TRL P + ++R R
Sbjct: 268 ALGAERAPANLKANYEKERDAAGTRLSPAELEALRGR 304
>UniRef50_Q9VL72 Cluster: CG5899-PA, isoform A; n=5; Diptera|Rep:
CG5899-PA, isoform A - Drosophila melanogaster (Fruit
fly)
Length = 844
Score = 36.3 bits (80), Expect = 0.67
Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Frame = +3
Query: 240 MFNSQTRIIDVVYNASNNELVRTKTLV-KNAIVVVDATPFRQWYESHYTLPLGRKKGAKL 416
M + ++ + AS EL KTL K A+ ++D PF W + L R G L
Sbjct: 180 MTGQRKKVFQFMNEASLIELQSVKTLSEKKALAIIDVRPFSDWSDLRQKLESIRMSGDLL 239
Query: 417 TEAEEAIINKKRS 455
A+E +INK+ +
Sbjct: 240 NYAQE-LINKQNT 251
>UniRef50_Q9YDY0 Cluster: 30S ribosomal protein S8e; n=3;
Desulfurococcales|Rep: 30S ribosomal protein S8e -
Aeropyrum pernix
Length = 136
Score = 36.3 bits (80), Expect = 0.67
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 5/65 (7%)
Frame = +1
Query: 31 MGISRDHWH-KRRATGGKRAPIRK-KRKYELGRPAANTRLG---PQRIHSVRSRGGNTKY 195
MGI + W K++ +GGKR K KRKY GRP T L + VR+RGG+ K
Sbjct: 1 MGIYQ--WRDKKKPSGGKRRYYYKVKRKYAAGRPPTYTTLSAAEEEERKPVRARGGSYKI 58
Query: 196 RALRL 210
+A ++
Sbjct: 59 KAKKV 63
>UniRef50_Q1Q3S6 Cluster: Putative uncharacterized protein; n=1;
Candidatus Kuenenia stuttgartiensis|Rep: Putative
uncharacterized protein - Candidatus Kuenenia
stuttgartiensis
Length = 374
Score = 34.7 bits (76), Expect = 2.0
Identities = 18/73 (24%), Positives = 37/73 (50%)
Frame = -1
Query: 386 QRIMRLIPLPEWSCIYYNNCILDKGLCTHQFIVRCIIHNINDTGLRVEHSDPQEKLPVSR 207
+RI+R P+ CIY I C H ++ C+ +TGL+++ ++ + +PV
Sbjct: 284 KRILRF--QPKQLCIYLGTEIEVLKECDHNKVMECLGDLYAETGLKLQKNEREVNVPVPD 341
Query: 206 RSARYLVFPPRER 168
+ RY+ + ++
Sbjct: 342 NAYRYIFYMENQK 354
>UniRef50_Q2NEU6 Cluster: 30S ribosomal protein S8e; n=1;
Methanosphaera stadtmanae DSM 3091|Rep: 30S ribosomal
protein S8e - Methanosphaera stadtmanae (strain DSM
3091)
Length = 126
Score = 33.5 bits (73), Expect = 4.7
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +1
Query: 61 RRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRA 201
R+ +G + + KR E GR A TR+G + + +RG TK RA
Sbjct: 10 RKPSGARSRRNKNKRNAEFGRNPAETRIGDEVKKEIVARGNCTKTRA 56
>UniRef50_Q387A6 Cluster: Phosphatidylinositol (3,5) kinase,
putative; n=1; Trypanosoma brucei|Rep:
Phosphatidylinositol (3,5) kinase, putative -
Trypanosoma brucei
Length = 1447
Score = 33.1 bits (72), Expect = 6.2
Identities = 20/69 (28%), Positives = 35/69 (50%)
Frame = +3
Query: 378 YTLPLGRKKGAKLTEAEEAIINKKRSQKTARKYLARQRLAKVEGL*KSNSTQGVCWLAWR 557
+T P+ +++ KL + + K+ S R +++ + L GL K G+C LAWR
Sbjct: 271 FTAPVAQEELQKLEQEVSFHLIKRAS----RHFMSEEVLLSGGGLDKVEWVAGICDLAWR 326
Query: 558 VAQVSVVAP 584
V ++V P
Sbjct: 327 VVSQTLVVP 335
>UniRef50_UPI0000F32D0C Cluster: Zinc finger CCCH domain-containing
protein 6.; n=1; Bos taurus|Rep: Zinc finger CCCH
domain-containing protein 6. - Bos Taurus
Length = 770
Score = 32.7 bits (71), Expect = 8.2
Identities = 19/37 (51%), Positives = 22/37 (59%)
Frame = +2
Query: 44 GITGISEGPPVGNVRPYARRGSMS*GVPLQTPGSALS 154
G S GP G + PYA + S S G+PL TPGS LS
Sbjct: 595 GAVPSSSGP--GALPPYAPKLSSSTGLPLGTPGSVLS 629
>UniRef50_Q89D60 Cluster: Blr7583 protein; n=1; Bradyrhizobium
japonicum|Rep: Blr7583 protein - Bradyrhizobium
japonicum
Length = 261
Score = 32.7 bits (71), Expect = 8.2
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +3
Query: 330 IVVVDATPFRQWYESHYTLPLGRKK 404
++ +D PFR+W + TLPLG K
Sbjct: 22 VIAIDGDPFREWQRTSRTLPLGEVK 46
>UniRef50_A5V4W5 Cluster: TonB-dependent receptor precursor; n=1;
Sphingomonas wittichii RW1|Rep: TonB-dependent receptor
precursor - Sphingomonas wittichii RW1
Length = 803
Score = 32.7 bits (71), Expect = 8.2
Identities = 20/66 (30%), Positives = 25/66 (37%), Gaps = 1/66 (1%)
Frame = +2
Query: 44 GITGISEGPPVGNVRPYARRGSMS*GVPLQTPGSALSESTPFVHVVEILSTVR-CVWTPV 220
GI + GN Y G P GS L P + + STV+ WTP+
Sbjct: 488 GIRWTEDKKTFGNANQYVVEAGFLTGAPFNPDGSGLQNGDPLMGPLGQRSTVKDTAWTPM 547
Query: 221 TSLGDR 238
SL R
Sbjct: 548 ASLSYR 553
>UniRef50_A5E7M6 Cluster: Putative uncharacterized protein; n=1;
Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
uncharacterized protein - Lodderomyces elongisporus
(Yeast) (Saccharomyces elongisporus)
Length = 620
Score = 32.7 bits (71), Expect = 8.2
Identities = 15/28 (53%), Positives = 18/28 (64%)
Frame = +3
Query: 345 ATPFRQWYESHYTLPLGRKKGAKLTEAE 428
ATPF Q + +HY L RKKG K+ E E
Sbjct: 374 ATPFYQTFLAHYIWQLKRKKGKKMKEDE 401
>UniRef50_Q92347 Cluster: Pumilio domain-containing protein
C6G9.02c; n=1; Schizosaccharomyces pombe|Rep: Pumilio
domain-containing protein C6G9.02c - Schizosaccharomyces
pombe (Fission yeast)
Length = 655
Score = 32.7 bits (71), Expect = 8.2
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = -1
Query: 623 DRTRVLCLLRCNHRRDHTDLGDSPRKPANALCGIALLEPL 504
D + CLLR H+RD + + RK N L G LLE +
Sbjct: 434 DANIIPCLLRSKHKRDKANPENKERKLVNNLLGAQLLEEM 473
>UniRef50_O60706 Cluster: ATP-binding cassette transporter
sub-family C member 9; n=33; Euteleostomi|Rep:
ATP-binding cassette transporter sub-family C member 9 -
Homo sapiens (Human)
Length = 1549
Score = 32.7 bits (71), Expect = 8.2
Identities = 26/93 (27%), Positives = 38/93 (40%), Gaps = 7/93 (7%)
Frame = +1
Query: 37 ISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTRLGPQRIH-------SVRSRGGNTKY 195
I D W TG P +K+ +P R P R H + R R T+
Sbjct: 614 IGDDSWR----TGESSLPFESCKKHTGVQPKTINRKQPGRYHLDSYEQSTRRLRPAETED 669
Query: 196 RALRLDTGNFSWGSECSTRKPVSLMLCIMHLTM 294
A+++ G FSWGS +T + + + LTM
Sbjct: 670 IAIKVTNGYFSWGSGLATLSNIDIRIPTGQLTM 702
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 659,548,640
Number of Sequences: 1657284
Number of extensions: 13461345
Number of successful extensions: 38915
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 37513
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38895
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 51239674196
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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