Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV31045.Seq
         (698 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000498E21 Cluster: myotubularin-related protein; n=...    37   0.41 
UniRef50_A4VDB8 Cluster: Phosphatidylinositol 4-kinase; n=1; Tet...    33   6.7  
UniRef50_UPI0001553219 Cluster: PREDICTED: similar to NF-180; n=...    33   8.9  
UniRef50_UPI00006CFF26 Cluster: Kelch motif family protein; n=1;...    33   8.9  

>UniRef50_UPI0000498E21 Cluster: myotubularin-related protein; n=1;
            Entamoeba histolytica HM-1:IMSS|Rep: myotubularin-related
            protein - Entamoeba histolytica HM-1:IMSS
          Length = 920

 Score = 37.1 bits (82), Expect = 0.41
 Identities = 25/76 (32%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
 Frame = -2

Query: 526  FLRAIDSVTSMFSVSSKGFS-REVLLSELSKSVFIFAGFSFTFSEWLESDS*TSALGKLF 350
            FL+ IDSV  ++S+    F   EV L EL   ++     +F F+ W E +S  + +   +
Sbjct: 809  FLQFIDSVYQLYSLFPSEFEFNEVFLKELLFQLYSCYFCNFRFNCWNEFNSFGNRVMNFY 868

Query: 349  SVTTYEVLLLFDSINE 302
            S   YE  +LF   NE
Sbjct: 869  SFLDYEEEILFSFSNE 884


>UniRef50_A4VDB8 Cluster: Phosphatidylinositol 4-kinase; n=1;
           Tetrahymena thermophila SB210|Rep: Phosphatidylinositol
           4-kinase - Tetrahymena thermophila SB210
          Length = 1748

 Score = 33.1 bits (72), Expect = 6.7
 Identities = 20/75 (26%), Positives = 33/75 (44%)
 Frame = +3

Query: 288 SDSNHSLIESNKSKTSYVVTEKSLPNADVYESDSSHSENVKEKPAKINXXXXXXXXXXXX 467
           +D NHS+ ESNKS       +K   + D +  +    EN +E P KI+            
Sbjct: 675 NDINHSIKESNKSMNENNFGQKLKQSDDQFNCELIDLENRQESPCKIDSITQKLELNEDF 734

Query: 468 EKPLEETENIDVTES 512
           +  +   +  D+T+S
Sbjct: 735 DPSIFRLQTEDLTKS 749


>UniRef50_UPI0001553219 Cluster: PREDICTED: similar to NF-180; n=2;
            Mus musculus|Rep: PREDICTED: similar to NF-180 - Mus
            musculus
          Length = 860

 Score = 32.7 bits (71), Expect = 8.9
 Identities = 19/83 (22%), Positives = 39/83 (46%), Gaps = 1/83 (1%)
 Frame = +3

Query: 291  DSNHSLIESNKSKTSYVVTEKSLP-NADVYESDSSHSENVKEKPAKINXXXXXXXXXXXX 467
            D  ++L+ S  + +     E+  P N D   SD S+S ++   P K +            
Sbjct: 771  DLPNNLVLSKSASSIQEFEEQPQPGNVDKKVSDDSYSPDISTSPTKKHTLKGQPKSENSD 830

Query: 468  EKPLEETENIDVTESIARRKSVR 536
            EK ++   N+ ++ S+AR++ ++
Sbjct: 831  EKGIKRPNNLHMSASVARKRLLK 853


>UniRef50_UPI00006CFF26 Cluster: Kelch motif family protein; n=1;
           Tetrahymena thermophila SB210|Rep: Kelch motif family
           protein - Tetrahymena thermophila SB210
          Length = 432

 Score = 32.7 bits (71), Expect = 8.9
 Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
 Frame = -2

Query: 583 IFIIYSQXNDIY-LDYGLTDF-LRAIDSVTSMFSVSSKGFSREVLLSELSKSVFIFAGFS 410
           IF+   + ND Y ++  + DF  +  +S+  +       +S     +EL+K + IF GFS
Sbjct: 248 IFLWNDRANDNYVIESSVLDFQTKKWNSLPILSQKPEHRYSAATCYNELTKQIIIFGGFS 307

Query: 409 FTFSE 395
           FT +E
Sbjct: 308 FTQNE 312


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 514,262,286
Number of Sequences: 1657284
Number of extensions: 7571814
Number of successful extensions: 19841
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 19133
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19831
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 55371905986
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)