Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV31045.Seq
         (698 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR541790-1|CAG46589.1|  127|Homo sapiens SNCG protein.                 30   9.1  
CR541788-1|CAG46587.1|  127|Homo sapiens SNCG protein.                 30   9.1  
BC014098-1|AAH14098.1|  127|Homo sapiens synuclein, gamma (breas...    30   9.1  
AK223367-1|BAD97087.1|  127|Homo sapiens synuclein, gamma (breas...    30   9.1  
AF411524-1|AAL05870.1|  127|Homo sapiens synuclein gamma protein.      30   9.1  
AF044311-1|AAC27738.1|  127|Homo sapiens gamma-synuclein protein.      30   9.1  
AF037207-1|AAC36586.1|  127|Homo sapiens persyn protein.               30   9.1  
AF017256-1|AAC36550.1|  127|Homo sapiens persyn protein.               30   9.1  
AF010126-1|AAB64109.1|  127|Homo sapiens BCSG1 protein protein.        30   9.1  

>CR541790-1|CAG46589.1|  127|Homo sapiens SNCG protein.
          Length = 127

 Score = 29.9 bits (64), Expect = 9.1
 Identities = 17/57 (29%), Positives = 29/57 (50%)
 Frame = +3

Query: 369 DVYESDSSHSENVKEKPAKINXXXXXXXXXXXXEKPLEETENIDVTESIARRKSVRP 539
           +V +S +S +E  KE+   ++             K +EE ENI VT  + R++ +RP
Sbjct: 47  NVVQSVTSVAEKTKEQANAVSEAVVSSVNTVAT-KTVEEAENIAVTSGVVRKEDLRP 102


>CR541788-1|CAG46587.1|  127|Homo sapiens SNCG protein.
          Length = 127

 Score = 29.9 bits (64), Expect = 9.1
 Identities = 17/57 (29%), Positives = 29/57 (50%)
 Frame = +3

Query: 369 DVYESDSSHSENVKEKPAKINXXXXXXXXXXXXEKPLEETENIDVTESIARRKSVRP 539
           +V +S +S +E  KE+   ++             K +EE ENI VT  + R++ +RP
Sbjct: 47  NVVQSVTSVAEKTKEQANAVSEAVVSSVNTVAT-KTVEEAENIAVTSGVVRKEDLRP 102


>BC014098-1|AAH14098.1|  127|Homo sapiens synuclein, gamma (breast
           cancer-specific protein 1) protein.
          Length = 127

 Score = 29.9 bits (64), Expect = 9.1
 Identities = 17/57 (29%), Positives = 29/57 (50%)
 Frame = +3

Query: 369 DVYESDSSHSENVKEKPAKINXXXXXXXXXXXXEKPLEETENIDVTESIARRKSVRP 539
           +V +S +S +E  KE+   ++             K +EE ENI VT  + R++ +RP
Sbjct: 47  NVVQSVTSVAEKTKEQANAVSEAVVSSVNTVAT-KTVEEAENIAVTSGVVRKEDLRP 102


>AK223367-1|BAD97087.1|  127|Homo sapiens synuclein, gamma (breast
           cancer-specific protein 1) variant protein.
          Length = 127

 Score = 29.9 bits (64), Expect = 9.1
 Identities = 17/57 (29%), Positives = 29/57 (50%)
 Frame = +3

Query: 369 DVYESDSSHSENVKEKPAKINXXXXXXXXXXXXEKPLEETENIDVTESIARRKSVRP 539
           +V +S +S +E  KE+   ++             K +EE ENI VT  + R++ +RP
Sbjct: 47  NVVQSVTSVAEKTKEQANAVSEAVVSSVNTVAT-KTVEEAENIAVTSGVVRKEDLRP 102


>AF411524-1|AAL05870.1|  127|Homo sapiens synuclein gamma protein.
          Length = 127

 Score = 29.9 bits (64), Expect = 9.1
 Identities = 17/57 (29%), Positives = 29/57 (50%)
 Frame = +3

Query: 369 DVYESDSSHSENVKEKPAKINXXXXXXXXXXXXEKPLEETENIDVTESIARRKSVRP 539
           +V +S +S +E  KE+   ++             K +EE ENI VT  + R++ +RP
Sbjct: 47  NVVQSVTSVAEKTKEQANAVSEAVVSSVNTVAT-KTVEEAENIAVTSGVVRKEDLRP 102


>AF044311-1|AAC27738.1|  127|Homo sapiens gamma-synuclein protein.
          Length = 127

 Score = 29.9 bits (64), Expect = 9.1
 Identities = 17/57 (29%), Positives = 29/57 (50%)
 Frame = +3

Query: 369 DVYESDSSHSENVKEKPAKINXXXXXXXXXXXXEKPLEETENIDVTESIARRKSVRP 539
           +V +S +S +E  KE+   ++             K +EE ENI VT  + R++ +RP
Sbjct: 47  NVVQSVTSVAEKTKEQANAVSEAVVSSVNTVAT-KTVEEAENIAVTSGVVRKEDLRP 102


>AF037207-1|AAC36586.1|  127|Homo sapiens persyn protein.
          Length = 127

 Score = 29.9 bits (64), Expect = 9.1
 Identities = 17/57 (29%), Positives = 29/57 (50%)
 Frame = +3

Query: 369 DVYESDSSHSENVKEKPAKINXXXXXXXXXXXXEKPLEETENIDVTESIARRKSVRP 539
           +V +S +S +E  KE+   ++             K +EE ENI VT  + R++ +RP
Sbjct: 47  NVVQSVTSVAEKTKEQANAVSEAVVSSVNTVAT-KTVEEAENIAVTSGVVRKEDLRP 102


>AF017256-1|AAC36550.1|  127|Homo sapiens persyn protein.
          Length = 127

 Score = 29.9 bits (64), Expect = 9.1
 Identities = 17/57 (29%), Positives = 29/57 (50%)
 Frame = +3

Query: 369 DVYESDSSHSENVKEKPAKINXXXXXXXXXXXXEKPLEETENIDVTESIARRKSVRP 539
           +V +S +S +E  KE+   ++             K +EE ENI VT  + R++ +RP
Sbjct: 47  NVVQSVTSVAEKTKEQANAVSEAVVSSVNTVAT-KTVEEAENIAVTSGVVRKEDLRP 102


>AF010126-1|AAB64109.1|  127|Homo sapiens BCSG1 protein protein.
          Length = 127

 Score = 29.9 bits (64), Expect = 9.1
 Identities = 17/57 (29%), Positives = 29/57 (50%)
 Frame = +3

Query: 369 DVYESDSSHSENVKEKPAKINXXXXXXXXXXXXEKPLEETENIDVTESIARRKSVRP 539
           +V +S +S +E  KE+   ++             K +EE ENI VT  + R++ +RP
Sbjct: 47  NVVQSVTSVAEKTKEQANAVSKAVVSSVNTVAT-KTVEEAENIAVTSGVVRKEDLRP 102


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 73,306,888
Number of Sequences: 237096
Number of extensions: 1087605
Number of successful extensions: 6296
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 6245
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6286
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8063224416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)