Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV31045.Seq
         (698 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF225958-1|AAF35374.1| 1215|Drosophila melanogaster unknown prot...    31   1.5  
AE014296-2132|AAF49924.2| 1215|Drosophila melanogaster CG32104-P...    31   1.5  
AY052096-1|AAK93520.1|  574|Drosophila melanogaster SD04526p pro...    29   8.0  
AE014296-3703|AAN12199.1|  574|Drosophila melanogaster CG32452-P...    29   8.0  
AE014296-3702|AAN12198.1|  574|Drosophila melanogaster CG32452-P...    29   8.0  

>AF225958-1|AAF35374.1| 1215|Drosophila melanogaster unknown
           protein.
          Length = 1215

 Score = 31.1 bits (67), Expect = 1.5
 Identities = 21/67 (31%), Positives = 34/67 (50%)
 Frame = -2

Query: 523 LRAIDSVTSMFSVSSKGFSREVLLSELSKSVFIFAGFSFTFSEWLESDS*TSALGKLFSV 344
           L A  ++  +FS+ ++GF  +VL   +SK +F    F    +   + +  + AL  LF  
Sbjct: 377 LSAFGAIAGIFSIYNQGFYDQVLSLPISK-IFFLLRFGLDDNAPAQLEVVSRALSNLFYN 435

Query: 343 TTYEVLL 323
            T EVLL
Sbjct: 436 ETDEVLL 442


>AE014296-2132|AAF49924.2| 1215|Drosophila melanogaster CG32104-PB
           protein.
          Length = 1215

 Score = 31.1 bits (67), Expect = 1.5
 Identities = 21/67 (31%), Positives = 34/67 (50%)
 Frame = -2

Query: 523 LRAIDSVTSMFSVSSKGFSREVLLSELSKSVFIFAGFSFTFSEWLESDS*TSALGKLFSV 344
           L A  ++  +FS+ ++GF  +VL   +SK +F    F    +   + +  + AL  LF  
Sbjct: 377 LSAFGAIAGIFSIYNQGFYDQVLSLPISK-IFFLLRFGLDDNAPAQLEVVSRALSNLFYN 435

Query: 343 TTYEVLL 323
            T EVLL
Sbjct: 436 ETDEVLL 442


>AY052096-1|AAK93520.1|  574|Drosophila melanogaster SD04526p
           protein.
          Length = 574

 Score = 28.7 bits (61), Expect = 8.0
 Identities = 11/29 (37%), Positives = 19/29 (65%)
 Frame = +2

Query: 212 RAKQKTRKRNQTLQQCSHSKSRCLRFRQQ 298
           R++ + R   + L++CS SKS+ +R  QQ
Sbjct: 361 RSRSRCRSARKPLRKCSRSKSKSVRITQQ 389


>AE014296-3703|AAN12199.1|  574|Drosophila melanogaster CG32452-PB,
           isoform B protein.
          Length = 574

 Score = 28.7 bits (61), Expect = 8.0
 Identities = 11/29 (37%), Positives = 19/29 (65%)
 Frame = +2

Query: 212 RAKQKTRKRNQTLQQCSHSKSRCLRFRQQ 298
           R++ + R   + L++CS SKS+ +R  QQ
Sbjct: 361 RSRSRCRSARKPLRKCSRSKSKSVRITQQ 389


>AE014296-3702|AAN12198.1|  574|Drosophila melanogaster CG32452-PA,
           isoform A protein.
          Length = 574

 Score = 28.7 bits (61), Expect = 8.0
 Identities = 11/29 (37%), Positives = 19/29 (65%)
 Frame = +2

Query: 212 RAKQKTRKRNQTLQQCSHSKSRCLRFRQQ 298
           R++ + R   + L++CS SKS+ +R  QQ
Sbjct: 361 RSRSRCRSARKPLRKCSRSKSKSVRITQQ 389


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,600,984
Number of Sequences: 53049
Number of extensions: 367302
Number of successful extensions: 948
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 911
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 948
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3067209849
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)