Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV31045.Seq
         (698 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z50176-2|CAA90539.1| 1115|Caenorhabditis elegans Hypothetical pr...    29   3.2  
U41992-7|AAA83358.1|  374|Caenorhabditis elegans Hypothetical pr...    29   4.2  

>Z50176-2|CAA90539.1| 1115|Caenorhabditis elegans Hypothetical
           protein C09G1.2 protein.
          Length = 1115

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 14/58 (24%), Positives = 25/58 (43%)
 Frame = +3

Query: 252 NNAVIQKADVYDSDSNHSLIESNKSKTSYVVTEKSLPNADVYESDSSHSENVKEKPAK 425
           NN+  +K D+  +    SL   +  +  +  TEKS P  D+ ++           PA+
Sbjct: 349 NNSDAEKEDIKGTRKRSSLENQHSERMQFSQTEKSSPIGDMVQNSPDFKNMANRTPAE 406


>U41992-7|AAA83358.1|  374|Caenorhabditis elegans Hypothetical
           protein F32E10.6 protein.
          Length = 374

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 16/38 (42%), Positives = 19/38 (50%)
 Frame = +3

Query: 312 ESNKSKTSYVVTEKSLPNADVYESDSSHSENVKEKPAK 425
           +SNK K S    +KS  + D   SD    E VKEK  K
Sbjct: 178 KSNKKKGSKKSPKKSAKSKDDDSSDEEEEEEVKEKSPK 215


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,169,253
Number of Sequences: 27780
Number of extensions: 192194
Number of successful extensions: 487
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 456
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 487
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1613473434
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)