Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV31037.Seq
(399 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z66500-12|CAA91308.1| 549|Caenorhabditis elegans Hypothetical p... 62 1e-10
U07941-1|AAB05072.1| 549|Caenorhabditis elegans CCT-1 protein. 62 1e-10
Z68318-10|CAA92697.1| 529|Caenorhabditis elegans Hypothetical p... 54 5e-08
U25632-1|AAA93233.1| 529|Caenorhabditis elegans CCT-2 protein. 54 5e-08
AL031268-2|CAA20331.1| 529|Caenorhabditis elegans Hypothetical ... 54 5e-08
AC024136-4|AAF35963.3| 543|Caenorhabditis elegans Hypothetical ... 46 1e-05
AF067947-11|AAO25994.1| 455|Caenorhabditis elegans Hypothetical... 45 2e-05
AF067947-10|AAC19232.2| 535|Caenorhabditis elegans Hypothetical... 45 2e-05
Z49068-8|CAA88861.1| 540|Caenorhabditis elegans Hypothetical pr... 43 7e-05
U25697-1|AAA92842.1| 540|Caenorhabditis elegans CCT-4 protein. 43 7e-05
AC024827-1|AAF60806.2| 581|Caenorhabditis elegans Hypothetical ... 41 4e-04
Z35599-3|CAA84660.1| 542|Caenorhabditis elegans Hypothetical pr... 36 0.014
Z32840-7|CAA83681.1| 542|Caenorhabditis elegans Hypothetical pr... 36 0.014
U25698-1|AAA92843.1| 542|Caenorhabditis elegans CCT-5 protein. 36 0.014
U13070-3|AAM22058.1| 429|Caenorhabditis elegans Chaperonin cont... 35 0.025
U13070-2|AAC46642.1| 539|Caenorhabditis elegans Chaperonin cont... 35 0.025
Z96047-10|CAH04703.1| 195|Caenorhabditis elegans Hypothetical p... 27 5.0
Z80215-19|CAH19104.1| 195|Caenorhabditis elegans Hypothetical p... 27 5.0
>Z66500-12|CAA91308.1| 549|Caenorhabditis elegans Hypothetical
protein T05C12.7 protein.
Length = 549
Score = 62.5 bits (145), Expect = 1e-10
Identities = 32/44 (72%), Positives = 34/44 (77%)
Frame = +3
Query: 237 IKNAGSEHPAAKVLVXLAQLQDXEVXDGTTSVVIIAAELL*NAD 368
+K EHPA KVLV LAQLQD EV DGTTSVVI+AAELL AD
Sbjct: 66 LKQLEVEHPAGKVLVELAQLQDEEVGDGTTSVVIVAAELLKRAD 109
Score = 44.0 bits (99), Expect = 4e-05
Identities = 23/36 (63%), Positives = 23/36 (63%)
Frame = +1
Query: 148 VKSSLXPXGLDKMLXXXXXXXXXXNDGATILKMLEV 255
VKSSL P GLDKML NDGATILK LEV
Sbjct: 36 VKSSLGPVGLDKMLVDDVGDVIVTNDGATILKQLEV 71
>U07941-1|AAB05072.1| 549|Caenorhabditis elegans CCT-1 protein.
Length = 549
Score = 62.5 bits (145), Expect = 1e-10
Identities = 32/44 (72%), Positives = 34/44 (77%)
Frame = +3
Query: 237 IKNAGSEHPAAKVLVXLAQLQDXEVXDGTTSVVIIAAELL*NAD 368
+K EHPA KVLV LAQLQD EV DGTTSVVI+AAELL AD
Sbjct: 66 LKQLEVEHPAGKVLVELAQLQDEEVGDGTTSVVIVAAELLKRAD 109
Score = 44.0 bits (99), Expect = 4e-05
Identities = 23/36 (63%), Positives = 23/36 (63%)
Frame = +1
Query: 148 VKSSLXPXGLDKMLXXXXXXXXXXNDGATILKMLEV 255
VKSSL P GLDKML NDGATILK LEV
Sbjct: 36 VKSSLGPVGLDKMLVDDVGDVIVTNDGATILKQLEV 71
>Z68318-10|CAA92697.1| 529|Caenorhabditis elegans Hypothetical
protein T21B10.7 protein.
Length = 529
Score = 53.6 bits (123), Expect = 5e-08
Identities = 25/44 (56%), Positives = 34/44 (77%)
Frame = +3
Query: 237 IKNAGSEHPAAKVLVXLAQLQDXEVXDGTTSVVIIAAELL*NAD 368
+K+ G ++PAAKVLV ++ QD EV DGTTSV ++AAELL A+
Sbjct: 68 LKSIGVDNPAAKVLVDMSMTQDHEVGDGTTSVTVLAAELLKEAE 111
Score = 29.5 bits (63), Expect = 0.93
Identities = 18/40 (45%), Positives = 22/40 (55%), Gaps = 4/40 (10%)
Frame = +1
Query: 148 VKSSLXPXGLDKML----XXXXXXXXXXNDGATILKMLEV 255
VKS+L P G+DK+L NDGATILK + V
Sbjct: 34 VKSTLGPKGMDKILISGNPESAGGIKVTNDGATILKSIGV 73
>U25632-1|AAA93233.1| 529|Caenorhabditis elegans CCT-2 protein.
Length = 529
Score = 53.6 bits (123), Expect = 5e-08
Identities = 25/44 (56%), Positives = 34/44 (77%)
Frame = +3
Query: 237 IKNAGSEHPAAKVLVXLAQLQDXEVXDGTTSVVIIAAELL*NAD 368
+K+ G ++PAAKVLV ++ QD EV DGTTSV ++AAELL A+
Sbjct: 68 LKSIGVDNPAAKVLVDMSMTQDHEVGDGTTSVTVLAAELLKEAE 111
Score = 29.5 bits (63), Expect = 0.93
Identities = 18/40 (45%), Positives = 22/40 (55%), Gaps = 4/40 (10%)
Frame = +1
Query: 148 VKSSLXPXGLDKML----XXXXXXXXXXNDGATILKMLEV 255
VKS+L P G+DK+L NDGATILK + V
Sbjct: 34 VKSTLGPKGMDKILISGNPESAGGIKVTNDGATILKSIGV 73
>AL031268-2|CAA20331.1| 529|Caenorhabditis elegans Hypothetical
protein T21B10.7 protein.
Length = 529
Score = 53.6 bits (123), Expect = 5e-08
Identities = 25/44 (56%), Positives = 34/44 (77%)
Frame = +3
Query: 237 IKNAGSEHPAAKVLVXLAQLQDXEVXDGTTSVVIIAAELL*NAD 368
+K+ G ++PAAKVLV ++ QD EV DGTTSV ++AAELL A+
Sbjct: 68 LKSIGVDNPAAKVLVDMSMTQDHEVGDGTTSVTVLAAELLKEAE 111
Score = 29.5 bits (63), Expect = 0.93
Identities = 18/40 (45%), Positives = 22/40 (55%), Gaps = 4/40 (10%)
Frame = +1
Query: 148 VKSSLXPXGLDKML----XXXXXXXXXXNDGATILKMLEV 255
VKS+L P G+DK+L NDGATILK + V
Sbjct: 34 VKSTLGPKGMDKILISGNPESAGGIKVTNDGATILKSIGV 73
>AC024136-4|AAF35963.3| 543|Caenorhabditis elegans Hypothetical
protein F54A3.3 protein.
Length = 543
Score = 45.6 bits (103), Expect = 1e-05
Identities = 19/37 (51%), Positives = 29/37 (78%)
Frame = +3
Query: 255 EHPAAKVLVXLAQLQDXEVXDGTTSVVIIAAELL*NA 365
+HPAAK ++ +A+ QD E DGTTSV+I+A E++ +A
Sbjct: 75 KHPAAKSMIEIARTQDEETGDGTTSVIILAGEVMAHA 111
>AF067947-11|AAO25994.1| 455|Caenorhabditis elegans Hypothetical
protein T10B5.5b protein.
Length = 455
Score = 44.8 bits (101), Expect = 2e-05
Identities = 20/32 (62%), Positives = 26/32 (81%)
Frame = +3
Query: 261 PAAKVLVXLAQLQDXEVXDGTTSVVIIAAELL 356
PAA +V +A+ QD EV DGTTSVV++AAE+L
Sbjct: 74 PAASTMVDIARSQDAEVGDGTTSVVVLAAEIL 105
Score = 37.1 bits (82), Expect = 0.005
Identities = 15/36 (41%), Positives = 24/36 (66%)
Frame = +1
Query: 148 VKSSLXPXGLDKMLXXXXXXXXXXNDGATILKMLEV 255
++++L P GLDK++ NDGATILK+L++
Sbjct: 36 IRTTLGPRGLDKLIVDSKGATTISNDGATILKLLDI 71
>AF067947-10|AAC19232.2| 535|Caenorhabditis elegans Hypothetical
protein T10B5.5a protein.
Length = 535
Score = 44.8 bits (101), Expect = 2e-05
Identities = 20/32 (62%), Positives = 26/32 (81%)
Frame = +3
Query: 261 PAAKVLVXLAQLQDXEVXDGTTSVVIIAAELL 356
PAA +V +A+ QD EV DGTTSVV++AAE+L
Sbjct: 74 PAASTMVDIARSQDAEVGDGTTSVVVLAAEIL 105
Score = 37.1 bits (82), Expect = 0.005
Identities = 15/36 (41%), Positives = 24/36 (66%)
Frame = +1
Query: 148 VKSSLXPXGLDKMLXXXXXXXXXXNDGATILKMLEV 255
++++L P GLDK++ NDGATILK+L++
Sbjct: 36 IRTTLGPRGLDKLIVDSKGATTISNDGATILKLLDI 71
>Z49068-8|CAA88861.1| 540|Caenorhabditis elegans Hypothetical
protein K01C8.10 protein.
Length = 540
Score = 43.2 bits (97), Expect = 7e-05
Identities = 19/33 (57%), Positives = 25/33 (75%)
Frame = +3
Query: 258 HPAAKVLVXLAQLQDXEVXDGTTSVVIIAAELL 356
HP AK+LV L++ QD E DGTT+VV++A LL
Sbjct: 84 HPTAKMLVELSKAQDIEAGDGTTTVVVMAGALL 116
Score = 35.1 bits (77), Expect = 0.019
Identities = 16/36 (44%), Positives = 21/36 (58%)
Frame = +1
Query: 148 VKSSLXPXGLDKMLXXXXXXXXXXNDGATILKMLEV 255
V++SL P G+DKM+ NDGATIL + V
Sbjct: 47 VRTSLGPRGMDKMIQSGNGDVTITNDGATILNQMSV 82
>U25697-1|AAA92842.1| 540|Caenorhabditis elegans CCT-4 protein.
Length = 540
Score = 43.2 bits (97), Expect = 7e-05
Identities = 19/33 (57%), Positives = 25/33 (75%)
Frame = +3
Query: 258 HPAAKVLVXLAQLQDXEVXDGTTSVVIIAAELL 356
HP AK+LV L++ QD E DGTT+VV++A LL
Sbjct: 84 HPTAKMLVELSKAQDIEAGDGTTTVVVMAGALL 116
Score = 35.1 bits (77), Expect = 0.019
Identities = 16/36 (44%), Positives = 21/36 (58%)
Frame = +1
Query: 148 VKSSLXPXGLDKMLXXXXXXXXXXNDGATILKMLEV 255
V++SL P G+DKM+ NDGATIL + V
Sbjct: 47 VRTSLGPRGMDKMIQSGNGDVTITNDGATILNQMSV 82
>AC024827-1|AAF60806.2| 581|Caenorhabditis elegans Hypothetical
protein Y55F3AR.3 protein.
Length = 581
Score = 40.7 bits (91), Expect = 4e-04
Identities = 16/43 (37%), Positives = 30/43 (69%)
Frame = +3
Query: 237 IKNAGSEHPAAKVLVXLAQLQDXEVXDGTTSVVIIAAELL*NA 365
+K +HPAA++++ ++Q+ ++ D T +VVI+AA LL +A
Sbjct: 72 LKELEIQHPAARIIIMATEMQEKQIGDNTNTVVILAAALLEHA 114
Score = 31.5 bits (68), Expect = 0.23
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +1
Query: 148 VKSSLXPXGLDKMLXXXXXXXXXXNDGATILKMLEV 255
++S+ P G++KM+ ND ATILK LE+
Sbjct: 42 IRSAYGPNGMNKMVINHIEKLFVTNDAATILKELEI 77
>Z35599-3|CAA84660.1| 542|Caenorhabditis elegans Hypothetical
protein C07G2.3a protein.
Length = 542
Score = 35.5 bits (78), Expect = 0.014
Identities = 16/36 (44%), Positives = 23/36 (63%)
Frame = +1
Query: 148 VKSSLXPXGLDKMLXXXXXXXXXXNDGATILKMLEV 255
+++SL P GLDKML NDGATI++ ++V
Sbjct: 49 LRTSLGPRGLDKMLVSPDGDVTITNDGATIMEKMDV 84
>Z32840-7|CAA83681.1| 542|Caenorhabditis elegans Hypothetical
protein C07G2.3a protein.
Length = 542
Score = 35.5 bits (78), Expect = 0.014
Identities = 16/36 (44%), Positives = 23/36 (63%)
Frame = +1
Query: 148 VKSSLXPXGLDKMLXXXXXXXXXXNDGATILKMLEV 255
+++SL P GLDKML NDGATI++ ++V
Sbjct: 49 LRTSLGPRGLDKMLVSPDGDVTITNDGATIMEKMDV 84
>U25698-1|AAA92843.1| 542|Caenorhabditis elegans CCT-5 protein.
Length = 542
Score = 35.5 bits (78), Expect = 0.014
Identities = 16/36 (44%), Positives = 23/36 (63%)
Frame = +1
Query: 148 VKSSLXPXGLDKMLXXXXXXXXXXNDGATILKMLEV 255
+++SL P GLDKML NDGATI++ ++V
Sbjct: 49 LRTSLGPRGLDKMLVSPDGDVTITNDGATIMEKMDV 84
>U13070-3|AAM22058.1| 429|Caenorhabditis elegans Chaperonin
containing tcp-1 protein6, isoform b protein.
Length = 429
Score = 34.7 bits (76), Expect = 0.025
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +3
Query: 255 EHPAAKVLVXLAQLQDXEVXDGTTSVVIIAAELL*NAD 368
+HP A ++ + QD DGTTS V++ ELL A+
Sbjct: 70 QHPTASMIAKASTAQDDVTGDGTTSTVLLIGELLKQAE 107
>U13070-2|AAC46642.1| 539|Caenorhabditis elegans Chaperonin
containing tcp-1 protein6, isoform a protein.
Length = 539
Score = 34.7 bits (76), Expect = 0.025
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +3
Query: 255 EHPAAKVLVXLAQLQDXEVXDGTTSVVIIAAELL*NAD 368
+HP A ++ + QD DGTTS V++ ELL A+
Sbjct: 70 QHPTASMIAKASTAQDDVTGDGTTSTVLLIGELLKQAE 107
>Z96047-10|CAH04703.1| 195|Caenorhabditis elegans Hypothetical
protein DY3.8 protein.
Length = 195
Score = 27.1 bits (57), Expect = 5.0
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -1
Query: 234 CGTIVSDCNIPNIVNQHLIQTXWPKGALYYV 142
CG V C+I IVN +L++ W G L Y+
Sbjct: 71 CGMAV--CSIIVIVNHYLLEKKWVWGGLLYL 99
>Z80215-19|CAH19104.1| 195|Caenorhabditis elegans Hypothetical
protein DY3.8 protein.
Length = 195
Score = 27.1 bits (57), Expect = 5.0
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -1
Query: 234 CGTIVSDCNIPNIVNQHLIQTXWPKGALYYV 142
CG V C+I IVN +L++ W G L Y+
Sbjct: 71 CGMAV--CSIIVIVNHYLLEKKWVWGGLLYL 99
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,719,271
Number of Sequences: 27780
Number of extensions: 105437
Number of successful extensions: 234
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 220
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 231
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 619699724
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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