Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV31036.Seq
         (548 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071539-1|AAL49161.1|  124|Drosophila melanogaster RE57810p pro...    58   1e-08
AE014296-3496|AAF51690.1|  124|Drosophila melanogaster CG12975-P...    58   1e-08
X03121-2|CAA26897.1|  530|Drosophila melanogaster alpha protein ...    28   7.2  
BT012668-1|AAT08474.1|  119|Drosophila melanogaster RE50359p pro...    28   7.2  
AY071374-1|AAL48996.1|  530|Drosophila melanogaster RE40347p pro...    28   7.2  
AE014297-4523|AAF56999.1|  530|Drosophila melanogaster CG17957-P...    28   7.2  

>AY071539-1|AAL49161.1|  124|Drosophila melanogaster RE57810p
           protein.
          Length = 124

 Score = 57.6 bits (133), Expect = 1e-08
 Identities = 29/96 (30%), Positives = 48/96 (50%)
 Frame = +2

Query: 260 GYPLAINATDIKVKEVDFNPEFISRVIPKLDWEVLWVAADSIGHSDGLPRSFRK*V**KR 439
           G+PL +     +V E +FNP F+ R++PKLDW  ++ AA     ++ +P    + +    
Sbjct: 20  GFPLKLTINKKEVVESEFNPTFVERILPKLDWSAVYGAAQVAELTEDIPAVQPENIVENE 79

Query: 440 RVFEEXXXXXXXXXXXXXTLDXSESGRQFPISKGIP 547
            + ++              L+  E+GR FPIS GIP
Sbjct: 80  LLLQKLHHLLFEIDVLEGQLECPETGRVFPISDGIP 115


>AE014296-3496|AAF51690.1|  124|Drosophila melanogaster CG12975-PA
           protein.
          Length = 124

 Score = 57.6 bits (133), Expect = 1e-08
 Identities = 29/96 (30%), Positives = 48/96 (50%)
 Frame = +2

Query: 260 GYPLAINATDIKVKEVDFNPEFISRVIPKLDWEVLWVAADSIGHSDGLPRSFRK*V**KR 439
           G+PL +     +V E +FNP F+ R++PKLDW  ++ AA     ++ +P    + +    
Sbjct: 20  GFPLKLTINKKEVVESEFNPTFVERILPKLDWSAVYGAAQVAELTEDIPAVQPENIVENE 79

Query: 440 RVFEEXXXXXXXXXXXXXTLDXSESGRQFPISKGIP 547
            + ++              L+  E+GR FPIS GIP
Sbjct: 80  LLLQKLHHLLFEIDVLEGQLECPETGRVFPISDGIP 115


>X03121-2|CAA26897.1|  530|Drosophila melanogaster alpha protein
           protein.
          Length = 530

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 23/71 (32%), Positives = 33/71 (46%), Gaps = 4/71 (5%)
 Frame = -3

Query: 525 NCLPDSDXSSVPLQLPPLTRLYELSSKTLRFHHTYFLKDLGRPSLW-PMLSAATHNTSQS 349
           N  PDS  +S        TR +  SS++    H  F+K  G  S++ P  S A    S+S
Sbjct: 457 NLEPDSSVASEAQVPSSATRTFVRSSRSFGKRHRSFVKQTGNCSVFGPQDSLAESGHSES 516

Query: 348 ---SFGITRLI 325
              SF IT ++
Sbjct: 517 DLISFQITEIL 527


>BT012668-1|AAT08474.1|  119|Drosophila melanogaster RE50359p
           protein.
          Length = 119

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 16/69 (23%), Positives = 36/69 (52%), Gaps = 4/69 (5%)
 Frame = -2

Query: 355 PIQLWYYTTNKFRIKIDFFNFNVCR--VNCKRIASQT--PFKHFEVSILWVISFIIIFVL 188
           P+Q++    N  R  + FFN N  +  ++ +R+ S+      +F+ + +++   ++I+ L
Sbjct: 38  PLQIFQMVRNSLRPWVVFFNINNFKTAISMQRLNSRVIRNLSYFQANYVFIFFVLMIYCL 97

Query: 187 CNFSRN*SL 161
            N   + SL
Sbjct: 98  YNLKHHGSL 106


>AY071374-1|AAL48996.1|  530|Drosophila melanogaster RE40347p
           protein.
          Length = 530

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 23/71 (32%), Positives = 33/71 (46%), Gaps = 4/71 (5%)
 Frame = -3

Query: 525 NCLPDSDXSSVPLQLPPLTRLYELSSKTLRFHHTYFLKDLGRPSLW-PMLSAATHNTSQS 349
           N  PDS  +S        TR +  SS++    H  F+K  G  S++ P  S A    S+S
Sbjct: 457 NLEPDSSVASEAQVPSSATRTFVRSSRSFGKRHRSFVKQTGNCSVFGPQDSLAESGHSES 516

Query: 348 ---SFGITRLI 325
              SF IT ++
Sbjct: 517 DLISFQITEIL 527


>AE014297-4523|AAF56999.1|  530|Drosophila melanogaster CG17957-PA
           protein.
          Length = 530

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 23/71 (32%), Positives = 33/71 (46%), Gaps = 4/71 (5%)
 Frame = -3

Query: 525 NCLPDSDXSSVPLQLPPLTRLYELSSKTLRFHHTYFLKDLGRPSLW-PMLSAATHNTSQS 349
           N  PDS  +S        TR +  SS++    H  F+K  G  S++ P  S A    S+S
Sbjct: 457 NLEPDSSVASEAQVPSSATRTFVRSSRSFGKRHRSFVKQTGNCSVFGPQDSLAESGHSES 516

Query: 348 ---SFGITRLI 325
              SF IT ++
Sbjct: 517 DLISFQITEIL 527


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,588,380
Number of Sequences: 53049
Number of extensions: 394134
Number of successful extensions: 903
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 872
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 901
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2089831299
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)