Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV31031.Seq
(499 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62841 Cluster: 40S ribosomal protein S15; n=46; cellul... 115 5e-25
UniRef50_Q01855 Cluster: 40S ribosomal protein S15; n=140; Eukar... 90 2e-17
UniRef50_Q9FML6 Cluster: 40S ribosomal protein S15-6; n=9; Eukar... 88 1e-16
UniRef50_UPI0000DD8522 Cluster: PREDICTED: similar to 40S riboso... 86 5e-16
UniRef50_Q3LWF2 Cluster: Ribosomal protein L15; n=1; Bigelowiell... 77 2e-13
UniRef50_Q9HIR3 Cluster: 30S ribosomal protein S19P; n=8; Euryar... 76 5e-13
UniRef50_Q975I5 Cluster: 30S ribosomal protein S19P; n=8; Archae... 76 5e-13
UniRef50_Q74MZ5 Cluster: 30S ribosomal protein S19P; n=1; Nanoar... 74 2e-12
UniRef50_P15010 Cluster: 30S ribosomal protein S19P; n=5; Euryar... 73 5e-12
UniRef50_Q7QTT8 Cluster: GLP_191_11250_10813; n=1; Giardia lambl... 68 1e-10
UniRef50_Q8ZWL4 Cluster: 30S ribosomal protein S19P; n=7; Archae... 66 3e-10
UniRef50_UPI00006CD29C Cluster: hypothetical protein TTHERM_0026... 66 4e-10
UniRef50_Q2QAS7 Cluster: Ribosomal protein S19; n=3; Archaea|Rep... 66 5e-10
UniRef50_Q8PV46 Cluster: 30S ribosomal protein S19P; n=9; Archae... 65 7e-10
UniRef50_Q8SRE7 Cluster: RIBOSOMAL PROTEIN S15; n=1; Encephalito... 63 4e-09
UniRef50_A2DVD8 Cluster: Ribosomal protein S19, putative; n=1; T... 62 5e-09
UniRef50_Q6LX07 Cluster: 30S ribosomal protein S19P; n=9; Euryar... 59 5e-08
UniRef50_Q00XN5 Cluster: Homology to unknown gene; n=2; Ostreoco... 54 2e-06
UniRef50_Q8M1F9 Cluster: Ribosomal protein S19; n=1; Chaetosphae... 48 2e-04
UniRef50_A7QFV7 Cluster: Chromosome undetermined scaffold_89, wh... 44 0.001
UniRef50_UPI00015BD7EF Cluster: UPI00015BD7EF related cluster; n... 44 0.002
UniRef50_A6S058 Cluster: Mitochondrial ribosome small subunit co... 44 0.003
UniRef50_Q9AIN5 Cluster: Ribosomal protein S19; n=1; Candidatus ... 43 0.003
UniRef50_P94271 Cluster: 30S ribosomal protein S19; n=66; cellul... 42 0.006
UniRef50_Q8LWZ8 Cluster: Ribosomal protein S19; n=16; stramenopi... 42 0.008
UniRef50_P26874 Cluster: Mitochondrial ribosomal protein S19; n=... 42 0.010
UniRef50_O66435 Cluster: 30S ribosomal protein S19; n=32; Bacter... 42 0.010
UniRef50_Q9US30 Cluster: Probable mitochondrial ribosomal protei... 41 0.013
UniRef50_Q4URE3 Cluster: 30S ribosomal protein S19; n=18; cellul... 41 0.018
UniRef50_P50893 Cluster: Mitochondrial ribosomal protein S19; n=... 40 0.023
UniRef50_P53733 Cluster: Mitochondrial 37S ribosomal protein S19... 40 0.031
UniRef50_P39697 Cluster: 40S ribosomal protein S19, mitochondria... 40 0.031
UniRef50_A6YEB0 Cluster: Ribosomal protein S19; n=1; Chlorokybus... 39 0.054
UniRef50_A6QU02 Cluster: Predicted protein; n=1; Ajellomyces cap... 39 0.054
UniRef50_Q2GUS0 Cluster: Putative uncharacterized protein; n=1; ... 38 0.17
UniRef50_Q9G868 Cluster: Ribosomal protein S19; n=2; Eukaryota|R... 37 0.22
UniRef50_Q6CDN4 Cluster: Yarrowia lipolytica chromosome B of str... 37 0.22
UniRef50_Q2EEV9 Cluster: Ribosomal protein S19; n=1; Helicospori... 37 0.29
UniRef50_Q8D208 Cluster: 30S ribosomal protein S19; n=14; cellul... 36 0.51
UniRef50_P0A7U6 Cluster: 30S ribosomal protein S19; n=263; cellu... 36 0.51
UniRef50_Q6YR17 Cluster: 30S ribosomal protein S19; n=72; cellul... 36 0.51
UniRef50_Q6A6N0 Cluster: 30S ribosomal protein S19; n=75; cellul... 35 1.2
UniRef50_P56808 Cluster: Chloroplast 30S ribosomal protein S19; ... 35 1.2
UniRef50_P0A4B5 Cluster: 30S ribosomal protein S19; n=47; Bacter... 34 1.5
UniRef50_Q5GSU8 Cluster: Ribosomal protein S19; n=10; Rickettsia... 33 2.7
UniRef50_A1DE43 Cluster: Mitochondrial ribosomal protein S19, pu... 33 2.7
UniRef50_Q0QIR8 Cluster: Ribosomal protein S19; n=1; Oltmannsiel... 33 4.7
UniRef50_P34772 Cluster: Plastid 30S ribosomal protein S19; n=1;... 33 4.7
UniRef50_A6LS35 Cluster: SMC domain protein; n=1; Clostridium be... 32 8.2
UniRef50_Q9TAJ3 Cluster: Ribosomal protein S19; n=1; Cafeteria r... 32 8.2
UniRef50_Q6UVU3 Cluster: Ribosomal protein S19; n=1; Pseudendocl... 32 8.2
UniRef50_Q6FLN2 Cluster: Similar to sp|P18480 Saccharomyces cere... 32 8.2
>UniRef50_P62841 Cluster: 40S ribosomal protein S15; n=46; cellular
organisms|Rep: 40S ribosomal protein S15 - Homo sapiens
(Human)
Length = 145
Score = 115 bits (277), Expect = 5e-25
Identities = 50/55 (90%), Positives = 54/55 (98%)
Frame = +2
Query: 254 QMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGRPGIXATHSSRFI 418
+MVGS+VG+YNGKTFNQVEIKPEMIGHYLGEFS+TYKPVKHGRPGI ATHSSRFI
Sbjct: 88 EMVGSMVGVYNGKTFNQVEIKPEMIGHYLGEFSITYKPVKHGRPGIGATHSSRFI 142
Score = 113 bits (273), Expect = 2e-24
Identities = 55/81 (67%), Positives = 63/81 (77%)
Frame = +3
Query: 12 KKKRIFRKFTYRGVDLDQLLDMPNEQLMELMHXXXXXXXXXGLKRKPMALVKKLRRAKKE 191
KKKR FRKFTYRGVDLDQLLDM EQLM+L GL+RK +L+K+LR+AKKE
Sbjct: 7 KKKRTFRKFTYRGVDLDQLLDMSYEQLMQLYSARQRRRLNRGLRRKQHSLLKRLRKAKKE 66
Query: 192 APPNEKPEIVKTHLRXMIIVP 254
APP EKPE+VKTHLR MII+P
Sbjct: 67 APPMEKPEVVKTHLRDMIILP 87
>UniRef50_Q01855 Cluster: 40S ribosomal protein S15; n=140;
Eukaryota|Rep: 40S ribosomal protein S15 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 142
Score = 90.2 bits (214), Expect = 2e-17
Identities = 41/55 (74%), Positives = 49/55 (89%)
Frame = +2
Query: 254 QMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGRPGIXATHSSRFI 418
+M+GS+VGIYNGK FNQVEI+PEM+GHYLGEFS+TY PV+HGR G AT +SRFI
Sbjct: 88 EMIGSVVGIYNGKAFNQVEIRPEMLGHYLGEFSITYTPVRHGRAG--AT-TSRFI 139
Score = 81.8 bits (193), Expect = 8e-15
Identities = 39/80 (48%), Positives = 51/80 (63%)
Frame = +3
Query: 15 KKRIFRKFTYRGVDLDQLLDMPNEQLMELMHXXXXXXXXXGLKRKPMALVKKLRRAKKEA 194
KKR+F+ +YRGVDL++LL+M E ++L G+ KP +KKLR AK A
Sbjct: 8 KKRVFKTHSYRGVDLEKLLEMSTEDFVKLAPARVRRRFARGMTSKPAGFMKKLRAAKLAA 67
Query: 195 PPNEKPEIVKTHLRXMIIVP 254
P NEKP V+TH+R MIIVP
Sbjct: 68 PENEKPAPVRTHMRNMIIVP 87
>UniRef50_Q9FML6 Cluster: 40S ribosomal protein S15-6; n=9;
Eukaryota|Rep: 40S ribosomal protein S15-6 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 160
Score = 87.8 bits (208), Expect = 1e-16
Identities = 44/82 (53%), Positives = 56/82 (68%), Gaps = 2/82 (2%)
Frame = +3
Query: 15 KKRIFRKFTYRGVDLDQLLDMPNEQLMELMHXXXXXXXXXGLKRKPMALVKKLRRAKKEA 194
KKR F+KF++RG ++D LL M N L +L + GLK++P+ L+KKLRRAKKEA
Sbjct: 17 KKRTFKKFSFRGFNVDALLKMSNVDLAKLFNARVRRRFYRGLKKQPLILIKKLRRAKKEA 76
Query: 195 PPNE--KPEIVKTHLRXMIIVP 254
KPE+VKTHLR MIIVP
Sbjct: 77 SDENKMKPEVVKTHLRNMIIVP 98
Score = 73.3 bits (172), Expect = 3e-12
Identities = 34/59 (57%), Positives = 43/59 (72%), Gaps = 4/59 (6%)
Frame = +2
Query: 254 QMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGRPGIXA----THSSRFI 418
+M+GS+VG++NGK FN++ IKPEMIGHYL EFS+T K V H RP I S+RFI
Sbjct: 99 EMIGSVVGVHNGKKFNEIVIKPEMIGHYLAEFSMTCKKVNHHRPRICGCCCFRRSTRFI 157
>UniRef50_UPI0000DD8522 Cluster: PREDICTED: similar to 40S ribosomal
protein S15 (RIG protein); n=2; Homo sapiens|Rep:
PREDICTED: similar to 40S ribosomal protein S15 (RIG
protein) - Homo sapiens
Length = 134
Score = 85.8 bits (203), Expect = 5e-16
Identities = 45/87 (51%), Positives = 58/87 (66%), Gaps = 6/87 (6%)
Frame = +3
Query: 12 KKKRIFRKFTYRGVDLDQLLDMPNEQLMELMHXXXXXXXXX------GLKRKPMALVKKL 173
+KK+ FR FT RGVDLDQLLDM +EQ M+L GL RK +L+K+L
Sbjct: 20 QKKQTFRNFTQRGVDLDQLLDMSSEQRMQLNSARRRRLNPGLWRLNPGLWRKQRSLLKRL 79
Query: 174 RRAKKEAPPNEKPEIVKTHLRXMIIVP 254
R+AKK APP EKPE+VKTH R ++++P
Sbjct: 80 RKAKKGAPPTEKPEVVKTHPRDVLLLP 106
Score = 34.7 bits (76), Expect = 1.2
Identities = 14/19 (73%), Positives = 17/19 (89%)
Frame = +2
Query: 257 MVGSIVGIYNGKTFNQVEI 313
MVGS VG+Y+GKTF QVE+
Sbjct: 108 MVGSTVGVYDGKTFKQVEM 126
>UniRef50_Q3LWF2 Cluster: Ribosomal protein L15; n=1; Bigelowiella
natans|Rep: Ribosomal protein L15 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 151
Score = 77.4 bits (182), Expect = 2e-13
Identities = 31/54 (57%), Positives = 43/54 (79%)
Frame = +2
Query: 257 MVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGRPGIXATHSSRFI 418
M+ + +YNG +++ +E++ M+G +LGEFS+TYKPVKHG PGI ATHSSRFI
Sbjct: 95 MINKKIYVYNGNSYSYIELQTLMLGKFLGEFSLTYKPVKHGNPGIGATHSSRFI 148
>UniRef50_Q9HIR3 Cluster: 30S ribosomal protein S19P; n=8;
Euryarchaeota|Rep: 30S ribosomal protein S19P -
Thermoplasma acidophilum
Length = 151
Score = 75.8 bits (178), Expect = 5e-13
Identities = 33/53 (62%), Positives = 41/53 (77%)
Frame = +2
Query: 260 VGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGRPGIXATHSSRFI 418
VG IV +YNG ++ + EIKPEMIGHYLGEF +T K VKH PG+ AT SS+F+
Sbjct: 96 VGKIVEVYNGNSYFKFEIKPEMIGHYLGEFVMTRKEVKHSGPGVGATRSSKFM 148
Score = 34.3 bits (75), Expect = 1.5
Identities = 26/77 (33%), Positives = 41/77 (53%)
Frame = +3
Query: 30 RKFTYRGVDLDQLLDMPNEQLMELMHXXXXXXXXXGLKRKPMALVKKLRRAKKEAPPNEK 209
++FTY+G L+ L M E+L++++ L R+P KKL K E+
Sbjct: 28 KEFTYKGYSLEDLQKMSMEELIKIL----PARARRTLLREPNYEQKKLME-KLES----D 78
Query: 210 PEIVKTHLRXMIIVPRW 260
E VKTH+R +II+P +
Sbjct: 79 EEDVKTHVRDVIILPNY 95
>UniRef50_Q975I5 Cluster: 30S ribosomal protein S19P; n=8;
Archaea|Rep: 30S ribosomal protein S19P - Sulfolobus
tokodaii
Length = 140
Score = 75.8 bits (178), Expect = 5e-13
Identities = 32/56 (57%), Positives = 42/56 (75%)
Frame = +2
Query: 254 QMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGRPGIXATHSSRFIS 421
+MVG +YNGK F + ++ PEMIGHYLGEFS+T K V+HG PG+ AT SS F++
Sbjct: 82 EMVGLKFAVYNGKEFVEFQVVPEMIGHYLGEFSITTKKVEHGEPGLKATRSSLFLA 137
Score = 52.4 bits (120), Expect = 5e-06
Identities = 26/76 (34%), Positives = 45/76 (59%)
Frame = +3
Query: 27 FRKFTYRGVDLDQLLDMPNEQLMELMHXXXXXXXXXGLKRKPMALVKKLRRAKKEAPPNE 206
++KF YRG LD+LL+MP ++ ++L+ G K L++K+R+ +E +
Sbjct: 9 WKKFRYRGKSLDELLNMPMDEFIKLLPSRQRRSLKKGFSDKQRRLLEKIRKYVRE---GK 65
Query: 207 KPEIVKTHLRXMIIVP 254
+ +KTH+R MII+P
Sbjct: 66 YSKTIKTHVRDMIILP 81
>UniRef50_Q74MZ5 Cluster: 30S ribosomal protein S19P; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S19P -
Nanoarchaeum equitans
Length = 140
Score = 74.1 bits (174), Expect = 2e-12
Identities = 35/55 (63%), Positives = 39/55 (70%)
Frame = +2
Query: 257 MVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGRPGIXATHSSRFIS 421
MVG V +YNGK + V+IKPEMIGHYLGEFS T K KH PGI AT SS +S
Sbjct: 84 MVGVTVHVYNGKEYVPVQIKPEMIGHYLGEFSFTTKRPKHSAPGIGATRSSAHVS 138
>UniRef50_P15010 Cluster: 30S ribosomal protein S19P; n=5;
Euryarchaeota|Rep: 30S ribosomal protein S19P -
Halobacterium salinarium (Halobacterium halobium)
Length = 140
Score = 72.5 bits (170), Expect = 5e-12
Identities = 38/96 (39%), Positives = 53/96 (55%), Gaps = 4/96 (4%)
Frame = +2
Query: 143 T*TNGIGQE----AASRQERGSSE*EARDREDSLEXHDHRSQMVGSIVGIYNGKTFNQVE 310
T T G+ +E A +E G+ E L + VG +Y G+ F +VE
Sbjct: 42 TITRGLSEEHHKVLAEARESGTEETANNPIRTHLRDMPVLPEFVGLTFAVYTGQEFERVE 101
Query: 311 IKPEMIGHYLGEFSVTYKPVKHGRPGIXATHSSRFI 418
++PEMIGHYLGEF +T V+HG+ GI AT SS+F+
Sbjct: 102 VQPEMIGHYLGEFQLTRSSVEHGQAGIGATRSSKFV 137
Score = 43.2 bits (97), Expect = 0.003
Identities = 24/76 (31%), Positives = 39/76 (51%)
Frame = +3
Query: 33 KFTYRGVDLDQLLDMPNEQLMELMHXXXXXXXXXGLKRKPMALVKKLRRAKKEAPPNEKP 212
+FTYRG DLD+L +M E + EL+ GL + ++ + R + E N
Sbjct: 12 EFTYRGHDLDELQEMSLEDVAELLPARQRRTITRGLSEEHHKVLAEARESGTEETANNP- 70
Query: 213 EIVKTHLRXMIIVPRW 260
++THLR M ++P +
Sbjct: 71 --IRTHLRDMPVLPEF 84
>UniRef50_Q7QTT8 Cluster: GLP_191_11250_10813; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_191_11250_10813 - Giardia lamblia
ATCC 50803
Length = 145
Score = 68.1 bits (159), Expect = 1e-10
Identities = 29/55 (52%), Positives = 40/55 (72%)
Frame = +2
Query: 254 QMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGRPGIXATHSSRFI 418
+M+G V +YNG+ F VEIKP M+G L E+S++YK V HG+ GI AT SS+F+
Sbjct: 88 EMIGMTVSVYNGRQFIPVEIKPPMVGRALREYSMSYKIVSHGKVGIGATRSSKFV 142
Score = 48.8 bits (111), Expect = 7e-05
Identities = 29/81 (35%), Positives = 46/81 (56%), Gaps = 1/81 (1%)
Frame = +3
Query: 15 KKRIFRKFTYRGVDLDQLLDMP-NEQLMELMHXXXXXXXXXGLKRKPMALVKKLRRAKKE 191
++R + +RGV++++L M + L +L GL K + V KLR ++
Sbjct: 8 RRRGLAQPNFRGVEVEKLATMKITDILPKLNARCRRRIGKHGLSMKHLRFVNKLR-LRRA 66
Query: 192 APPNEKPEIVKTHLRXMIIVP 254
A P++KP+IV+THLR MII P
Sbjct: 67 AQPSQKPKIVRTHLRDMIIFP 87
>UniRef50_Q8ZWL4 Cluster: 30S ribosomal protein S19P; n=7;
Archaea|Rep: 30S ribosomal protein S19P - Pyrobaculum
aerophilum
Length = 158
Score = 66.5 bits (155), Expect = 3e-10
Identities = 31/58 (53%), Positives = 41/58 (70%)
Frame = +2
Query: 254 QMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGRPGIXATHSSRFISAQ 427
+MVG + +YNG T+ V I P IGHYLGEF++T K V+HG PG+ AT SS I+A+
Sbjct: 101 EMVGLTIHVYNGITYIPVFISPWHIGHYLGEFALTTKIVQHGEPGLKATRSSLHIAAK 158
Score = 51.6 bits (118), Expect = 1e-05
Identities = 26/73 (35%), Positives = 45/73 (61%)
Frame = +3
Query: 36 FTYRGVDLDQLLDMPNEQLMELMHXXXXXXXXXGLKRKPMALVKKLRRAKKEAPPNEKPE 215
F YRG L++LL+M ++ ++L+ GLK + L++K+R+AK+ A +K
Sbjct: 29 FRYRGKTLEELLNMSMDEFIKLLPARQRRSLKRGLKPEHRKLLEKIRKAKRLAAQGKK-V 87
Query: 216 IVKTHLRXMIIVP 254
+++TH R MII+P
Sbjct: 88 VIRTHCRDMIILP 100
>UniRef50_UPI00006CD29C Cluster: hypothetical protein
TTHERM_00266390; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00266390 - Tetrahymena
thermophila SB210
Length = 144
Score = 66.1 bits (154), Expect = 4e-10
Identities = 27/45 (60%), Positives = 35/45 (77%)
Frame = +2
Query: 254 QMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGRPG 388
++VG IVG+YNGK F VE+K +MIG YL EF++TYKP HG+ G
Sbjct: 93 ELVGGIVGVYNGKEFVNVEVKFDMIGKYLAEFAMTYKPTTHGKTG 137
Score = 52.0 bits (119), Expect = 7e-06
Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 9/88 (10%)
Frame = +3
Query: 18 KRIFRKFTYRGVDLDQLLDMPN---------EQLMELMHXXXXXXXXXGLKRKPMALVKK 170
K+ +KFT+RG L++L + + ++L L G+ K V K
Sbjct: 5 KKSIKKFTFRGKGLEELTALASGSNSEKLISDELAALFDAKTRRRVKRGISEKYAKFVNK 64
Query: 171 LRRAKKEAPPNEKPEIVKTHLRXMIIVP 254
+RR+K++ P EKP VKTH R MI++P
Sbjct: 65 VRRSKEKCPAGEKPVPVKTHYRSMIVIP 92
>UniRef50_Q2QAS7 Cluster: Ribosomal protein S19; n=3; Archaea|Rep:
Ribosomal protein S19 - uncultured marine group II
euryarchaeote HF70_59C08
Length = 173
Score = 65.7 bits (153), Expect = 5e-10
Identities = 27/56 (48%), Positives = 40/56 (71%)
Frame = +2
Query: 254 QMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGRPGIXATHSSRFIS 421
+MVG +G+++G+ F VEI PEMIGH LGE++ T + V H PG+ AT SS+ ++
Sbjct: 116 EMVGRTIGVHDGRAFKMVEILPEMIGHALGEYASTRRSVTHTGPGVGATRSSKHVA 171
>UniRef50_Q8PV46 Cluster: 30S ribosomal protein S19P; n=9;
Archaea|Rep: 30S ribosomal protein S19P - Methanosarcina
mazei (Methanosarcina frisia)
Length = 136
Score = 65.3 bits (152), Expect = 7e-10
Identities = 27/55 (49%), Positives = 38/55 (69%)
Frame = +2
Query: 254 QMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGRPGIXATHSSRFI 418
+M+G + ++NGK F VE++PEMIGH GEF+ T V HG G+ AT SS+F+
Sbjct: 79 EMIGIAIEVHNGKEFVNVELQPEMIGHRFGEFAPTRSRVNHGSAGVGATRSSKFV 133
>UniRef50_Q8SRE7 Cluster: RIBOSOMAL PROTEIN S15; n=1;
Encephalitozoon cuniculi|Rep: RIBOSOMAL PROTEIN S15 -
Encephalitozoon cuniculi
Length = 149
Score = 62.9 bits (146), Expect = 4e-09
Identities = 27/54 (50%), Positives = 39/54 (72%)
Frame = +2
Query: 257 MVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGRPGIXATHSSRFI 418
M+G++VG++ G + VEIKPEM+G L +F+ T KHGRPGI A+ SS+F+
Sbjct: 93 MIGALVGVHVGNGYLPVEIKPEMVGFVLSDFAPTRVTPKHGRPGIGASSSSKFV 146
Score = 58.4 bits (135), Expect = 8e-08
Identities = 32/85 (37%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
Frame = +3
Query: 3 ETLKKKRIFRKFTYRGVDLDQLLDMPNEQLMELMHXXXXXXXXXGLKRKPMALVKKLRRA 182
E KKKR FR++TYRGV +++L MP ++ +L GL + + L+K A
Sbjct: 7 EVSKKKRTFRRYTYRGVPVEELEKMPFSEVAKLFPSRLRRRVRRGLSSREVELIKGCIAA 66
Query: 183 KKE-APPNEKPEIVKTHLRXMIIVP 254
K + KPE+V+TH R II P
Sbjct: 67 KAACVSSSSKPEMVRTHARSAIIWP 91
>UniRef50_A2DVD8 Cluster: Ribosomal protein S19, putative; n=1;
Trichomonas vaginalis G3|Rep: Ribosomal protein S19,
putative - Trichomonas vaginalis G3
Length = 144
Score = 62.5 bits (145), Expect = 5e-09
Identities = 26/52 (50%), Positives = 38/52 (73%)
Frame = +2
Query: 254 QMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGRPGIXATHSS 409
+ V +++GIY+G F +V+IKPEMIGH L +F+ + K VKH + G+ AT SS
Sbjct: 87 EFVDNVIGIYDGHVFFEVQIKPEMIGHVLADFAPSKKVVKHSKAGVGATRSS 138
Score = 51.6 bits (118), Expect = 1e-05
Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 2/79 (2%)
Frame = +3
Query: 30 RKFTYRGVDLDQLLDMPNEQLMELMHXXXXXXXXXGLKRKPMALVKKLRRAKK--EAPPN 203
R +TYRG LD L M + +EL+ K + L++KL++A++ E
Sbjct: 10 RNYTYRGKTLDDLRAMELKDFVELLPTKRRRFISRSFDLKHVHLIEKLKKARQAVEGQAG 69
Query: 204 EKPEIVKTHLRXMIIVPRW 260
+P +VKTHLR M+I+P +
Sbjct: 70 VRPPVVKTHLRHMVILPEF 88
>UniRef50_Q6LX07 Cluster: 30S ribosomal protein S19P; n=9;
Euryarchaeota|Rep: 30S ribosomal protein S19P -
Methanococcus maripaludis
Length = 161
Score = 59.3 bits (137), Expect = 5e-08
Identities = 24/55 (43%), Positives = 36/55 (65%)
Frame = +2
Query: 254 QMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGRPGIXATHSSRFI 418
+M+G GIYNGK F ++++ E +G +LGE + T V+HG PG+ AT S F+
Sbjct: 104 EMIGLTFGIYNGKEFKEIKLVEETVGRFLGEMAPTRGVVQHGSPGMGATRGSMFV 158
Score = 47.6 bits (108), Expect = 2e-04
Identities = 20/74 (27%), Positives = 40/74 (54%)
Frame = +3
Query: 33 KFTYRGVDLDQLLDMPNEQLMELMHXXXXXXXXXGLKRKPMALVKKLRRAKKEAPPNEKP 212
+F Y+G L++L +MP ++ ME++ G+ K LV K+++A++ +
Sbjct: 30 EFKYKGFSLEELQEMPIKKFMEIVPSRQRRTMARGITPKQRKLVMKIKKARRLTNRGKDA 89
Query: 213 EIVKTHLRXMIIVP 254
+++TH R +I P
Sbjct: 90 RVIRTHCRDFVITP 103
>UniRef50_Q00XN5 Cluster: Homology to unknown gene; n=2;
Ostreococcus|Rep: Homology to unknown gene -
Ostreococcus tauri
Length = 561
Score = 53.6 bits (123), Expect = 2e-06
Identities = 28/44 (63%), Positives = 28/44 (63%)
Frame = -2
Query: 387 PGLPCFTGLYVTENSPR*WPIISGLISTWLKVFPL*MPTIEPTI 256
P PC TG YV SPR PIISGLIST L PL PT EPTI
Sbjct: 22 PARPCETGRYVIAYSPRYDPIISGLISTVLNTLPLYTPTTEPTI 65
>UniRef50_Q8M1F9 Cluster: Ribosomal protein S19; n=1;
Chaetosphaeridium globosum|Rep: Ribosomal protein S19 -
Chaetosphaeridium globosum
Length = 114
Score = 47.6 bits (108), Expect = 2e-04
Identities = 21/40 (52%), Positives = 27/40 (67%)
Frame = +2
Query: 254 QMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVK 373
Q VG+IV +YNGK F ++I EM+GH GEF+ T K K
Sbjct: 61 QFVGNIVSVYNGKNFVNLKITDEMVGHKYGEFASTRKIAK 100
>UniRef50_A7QFV7 Cluster: Chromosome undetermined scaffold_89, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_89, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 319
Score = 44.4 bits (100), Expect = 0.001
Identities = 21/34 (61%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Frame = +2
Query: 254 QMVGSIVGIYNGKTFNQVEI-KPEMIGHYLGEFS 352
+M+G IVG+YNGKT NQV I KP+ I HYL S
Sbjct: 39 EMIGYIVGVYNGKTLNQVGILKPKKICHYLTSLS 72
>UniRef50_UPI00015BD7EF Cluster: UPI00015BD7EF related cluster; n=1;
unknown|Rep: UPI00015BD7EF UniRef100 entry - unknown
Length = 153
Score = 44.0 bits (99), Expect = 0.002
Identities = 18/36 (50%), Positives = 24/36 (66%)
Frame = +2
Query: 251 SQMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVT 358
S V + ++NGKTF + I PEM+GH LGEF+ T
Sbjct: 101 SDFVNHTIAVHNGKTFVPIYITPEMVGHKLGEFAPT 136
>UniRef50_A6S058 Cluster: Mitochondrial ribosome small subunit
component S19; n=2; Sclerotiniaceae|Rep: Mitochondrial
ribosome small subunit component S19 - Botryotinia
fuckeliana B05.10
Length = 93
Score = 43.6 bits (98), Expect = 0.003
Identities = 19/35 (54%), Positives = 24/35 (68%)
Frame = +2
Query: 260 VGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYK 364
VG I+NGK +N+V I +M+GH LGEFS T K
Sbjct: 49 VGLTFEIHNGKVYNEVTITEDMVGHKLGEFSATRK 83
>UniRef50_Q9AIN5 Cluster: Ribosomal protein S19; n=1; Candidatus
Carsonella ruddii|Rep: Ribosomal protein S19 -
Carsonella ruddii
Length = 88
Score = 43.2 bits (97), Expect = 0.003
Identities = 20/43 (46%), Positives = 28/43 (65%)
Frame = +2
Query: 254 QMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGR 382
+M+G + ++NGK FN+V I EMIG+ LGEFS T H +
Sbjct: 36 KMIGLNIFVHNGKKFNKVYIIEEMIGYKLGEFSFTKNFKSHSK 78
>UniRef50_P94271 Cluster: 30S ribosomal protein S19; n=66; cellular
organisms|Rep: 30S ribosomal protein S19 - Borrelia
burgdorferi (Lyme disease spirochete)
Length = 92
Score = 42.3 bits (95), Expect = 0.006
Identities = 17/35 (48%), Positives = 24/35 (68%)
Frame = +2
Query: 254 QMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVT 358
+MV + +YNGKTF + I +++GH LGEFS T
Sbjct: 43 EMVSLTISVYNGKTFIPIYITEDLVGHKLGEFSPT 77
>UniRef50_Q8LWZ8 Cluster: Ribosomal protein S19; n=16;
stramenopiles|Rep: Ribosomal protein S19 - Laminaria
digitata
Length = 89
Score = 41.9 bits (94), Expect = 0.008
Identities = 20/35 (57%), Positives = 23/35 (65%)
Frame = +2
Query: 260 VGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYK 364
VG + IYNGK +IKPEM+GH LGEF T K
Sbjct: 40 VGLKLQIYNGKDMISRKIKPEMVGHKLGEFVTTRK 74
>UniRef50_P26874 Cluster: Mitochondrial ribosomal protein S19; n=7;
Eukaryota|Rep: Mitochondrial ribosomal protein S19 -
Marchantia polymorpha (Liverwort)
Length = 93
Score = 41.5 bits (93), Expect = 0.010
Identities = 20/43 (46%), Positives = 25/43 (58%)
Frame = +2
Query: 254 QMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGR 382
Q VG IYNGK F ++I EM+GH GEF+ T K G+
Sbjct: 35 QFVGCYAQIYNGKGFVGLKITEEMVGHKFGEFASTRKTSSLGK 77
>UniRef50_O66435 Cluster: 30S ribosomal protein S19; n=32;
Bacteria|Rep: 30S ribosomal protein S19 - Aquifex
aeolicus
Length = 219
Score = 41.5 bits (93), Expect = 0.010
Identities = 17/35 (48%), Positives = 24/35 (68%)
Frame = +2
Query: 254 QMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVT 358
+ VG + ++NGKTF V I +M+GH LGEF+ T
Sbjct: 168 EFVGHTIAVHNGKTFVPVYITQDMVGHKLGEFAPT 202
>UniRef50_Q9US30 Cluster: Probable mitochondrial ribosomal protein
S19; n=1; Schizosaccharomyces pombe|Rep: Probable
mitochondrial ribosomal protein S19 -
Schizosaccharomyces pombe (Fission yeast)
Length = 108
Score = 41.1 bits (92), Expect = 0.013
Identities = 18/37 (48%), Positives = 27/37 (72%)
Frame = +2
Query: 254 QMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYK 364
+MVG+ ++NGK++ V+I +MIGH LGEF+ T K
Sbjct: 62 RMVGAQFMVHNGKSYANVKITEDMIGHKLGEFAPTRK 98
>UniRef50_Q4URE3 Cluster: 30S ribosomal protein S19; n=18; cellular
organisms|Rep: 30S ribosomal protein S19 - Xanthomonas
campestris pv. campestris (strain 8004)
Length = 89
Score = 40.7 bits (91), Expect = 0.018
Identities = 18/42 (42%), Positives = 25/42 (59%)
Frame = +2
Query: 254 QMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHG 379
+MVG + ++NGK V + M+GH LGEF+VT HG
Sbjct: 41 EMVGITIAVHNGKNHIPVLVNENMVGHKLGEFAVTRTFKGHG 82
>UniRef50_P50893 Cluster: Mitochondrial ribosomal protein S19; n=3;
Chlorophyta|Rep: Mitochondrial ribosomal protein S19 -
Platymonas subcordiformis
Length = 83
Score = 40.3 bits (90), Expect = 0.023
Identities = 18/41 (43%), Positives = 25/41 (60%)
Frame = +2
Query: 254 QMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKH 376
+ +G V IYNG + ++IK +MIGH GEF+ T K H
Sbjct: 38 KFIGREVEIYNGHKWITIKIKEDMIGHKFGEFAFTRKATIH 78
>UniRef50_P53733 Cluster: Mitochondrial 37S ribosomal protein S19;
n=16; Dikarya|Rep: Mitochondrial 37S ribosomal protein
S19 - Saccharomyces cerevisiae (Baker's yeast)
Length = 91
Score = 39.9 bits (89), Expect = 0.031
Identities = 18/37 (48%), Positives = 24/37 (64%)
Frame = +2
Query: 254 QMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYK 364
Q VG I+NGK + +EI +M+GH LGEF+ T K
Sbjct: 45 QFVGLKFQIHNGKEYVPIEISEDMVGHKLGEFAPTRK 81
>UniRef50_P39697 Cluster: 40S ribosomal protein S19, mitochondrial
precursor; n=85; Streptophytina|Rep: 40S ribosomal
protein S19, mitochondrial precursor - Arabidopsis
thaliana (Mouse-ear cress)
Length = 212
Score = 39.9 bits (89), Expect = 0.031
Identities = 19/43 (44%), Positives = 25/43 (58%)
Frame = +2
Query: 254 QMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGR 382
+ V S V IYNGKT + +I +GH GEF+ T K KH +
Sbjct: 168 EYVDSAVRIYNGKTHVRCKITEGKVGHKFGEFAFTRKVKKHAK 210
>UniRef50_A6YEB0 Cluster: Ribosomal protein S19; n=1; Chlorokybus
atmophyticus|Rep: Ribosomal protein S19 - Chlorokybus
atmophyticus (Soil alga)
Length = 130
Score = 39.1 bits (87), Expect = 0.054
Identities = 19/39 (48%), Positives = 22/39 (56%)
Frame = +2
Query: 260 VGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKH 376
VG ++NGK F V I EMIGH GEF+ T K H
Sbjct: 85 VGQSFEVHNGKLFIPVRITEEMIGHKFGEFASTRKKPVH 123
>UniRef50_A6QU02 Cluster: Predicted protein; n=1; Ajellomyces
capsulatus NAm1|Rep: Predicted protein - Ajellomyces
capsulatus NAm1
Length = 144
Score = 39.1 bits (87), Expect = 0.054
Identities = 17/31 (54%), Positives = 22/31 (70%)
Frame = +2
Query: 260 VGSIVGIYNGKTFNQVEIKPEMIGHYLGEFS 352
VG ++NGKT+N+V I EM+G LGEFS
Sbjct: 24 VGLKFAVHNGKTYNEVFITDEMVGRKLGEFS 54
>UniRef50_Q2GUS0 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 152
Score = 37.5 bits (83), Expect = 0.17
Identities = 16/31 (51%), Positives = 21/31 (67%)
Frame = +2
Query: 260 VGSIVGIYNGKTFNQVEIKPEMIGHYLGEFS 352
VG ++NGK ++ V I EM+GH LGEFS
Sbjct: 92 VGLKFQVHNGKVYHDVTITEEMVGHKLGEFS 122
>UniRef50_Q9G868 Cluster: Ribosomal protein S19; n=2; Eukaryota|Rep:
Ribosomal protein S19 - Malawimonas jakobiformis
Length = 85
Score = 37.1 bits (82), Expect = 0.22
Identities = 17/35 (48%), Positives = 21/35 (60%)
Frame = +2
Query: 254 QMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVT 358
Q + V IYNG F ++I MIGH GEFS+T
Sbjct: 36 QYLNKKVKIYNGNKFIPIKITDNMIGHKFGEFSLT 70
>UniRef50_Q6CDN4 Cluster: Yarrowia lipolytica chromosome B of strain
CLIB122 of Yarrowia lipolytica; n=1; Yarrowia
lipolytica|Rep: Yarrowia lipolytica chromosome B of
strain CLIB122 of Yarrowia lipolytica - Yarrowia
lipolytica (Candida lipolytica)
Length = 89
Score = 37.1 bits (82), Expect = 0.22
Identities = 15/41 (36%), Positives = 25/41 (60%)
Frame = +2
Query: 254 QMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKH 376
Q VG ++NGK + V + +M+G LGE++ T KP ++
Sbjct: 44 QFVGVTFHVHNGKEYVPVNVTQDMVGTKLGEYAYTRKPFRY 84
>UniRef50_Q2EEV9 Cluster: Ribosomal protein S19; n=1;
Helicosporidium sp. ex Simulium jonesii|Rep: Ribosomal
protein S19 - Helicosporidium sp. subsp. Simulium
jonesii (Green alga)
Length = 117
Score = 36.7 bits (81), Expect = 0.29
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = +2
Query: 257 MVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVT 358
M+G I+ ++NG+ V I EM+G LGEF+ T
Sbjct: 61 MIGEIIAVHNGREHIPVYITEEMVGFKLGEFATT 94
>UniRef50_Q8D208 Cluster: 30S ribosomal protein S19; n=14; cellular
organisms|Rep: 30S ribosomal protein S19 -
Wigglesworthia glossinidia brevipalpis
Length = 92
Score = 35.9 bits (79), Expect = 0.51
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = +2
Query: 257 MVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVT 358
M+G + ++NGK + I EM+GH LGEF T
Sbjct: 44 MIGMTISVHNGKQHIPIFIGDEMVGHKLGEFVPT 77
>UniRef50_P0A7U6 Cluster: 30S ribosomal protein S19; n=263; cellular
organisms|Rep: 30S ribosomal protein S19 - Shigella
flexneri
Length = 92
Score = 35.9 bits (79), Expect = 0.51
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = +2
Query: 257 MVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVT 358
M+G + ++NG+ V + EM+GH LGEF+ T
Sbjct: 44 MIGLTIAVHNGRQHVPVFVTDEMVGHKLGEFAPT 77
>UniRef50_Q6YR17 Cluster: 30S ribosomal protein S19; n=72; cellular
organisms|Rep: 30S ribosomal protein S19 - Onion yellows
phytoplasma
Length = 93
Score = 35.9 bits (79), Expect = 0.51
Identities = 16/33 (48%), Positives = 20/33 (60%)
Frame = +2
Query: 260 VGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVT 358
VG + +YNG+ V I M+GH LGEFS T
Sbjct: 45 VGHKIAVYNGREHIPVYITENMVGHKLGEFSPT 77
>UniRef50_Q6A6N0 Cluster: 30S ribosomal protein S19; n=75; cellular
organisms|Rep: 30S ribosomal protein S19 -
Propionibacterium acnes
Length = 93
Score = 34.7 bits (76), Expect = 1.2
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = +2
Query: 257 MVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVT 358
M+G +G+++G+ V + M+GH LGEF+ T
Sbjct: 44 MIGHTIGVHDGRKHVPVFVTESMVGHKLGEFAPT 77
>UniRef50_P56808 Cluster: Chloroplast 30S ribosomal protein S19;
n=326; cellular organisms|Rep: Chloroplast 30S ribosomal
protein S19 - Arabidopsis thaliana (Mouse-ear cress)
Length = 92
Score = 34.7 bits (76), Expect = 1.2
Identities = 16/34 (47%), Positives = 21/34 (61%)
Frame = +2
Query: 257 MVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVT 358
M+G + I+NG+ V I M+GH LGEFS T
Sbjct: 44 MIGHTIAIHNGREHLPVYIIDLMVGHKLGEFSPT 77
>UniRef50_P0A4B5 Cluster: 30S ribosomal protein S19; n=47;
Bacteria|Rep: 30S ribosomal protein S19 - Streptococcus
pneumoniae
Length = 93
Score = 34.3 bits (75), Expect = 1.5
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +2
Query: 260 VGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVT 358
+G + +Y+G+ V I+ +M+GH LGEF+ T
Sbjct: 45 IGYTIAVYDGRKHVPVYIQEDMVGHKLGEFAPT 77
>UniRef50_Q5GSU8 Cluster: Ribosomal protein S19; n=10;
Rickettsiales|Rep: Ribosomal protein S19 - Wolbachia sp.
subsp. Brugia malayi (strain TRS)
Length = 94
Score = 33.5 bits (73), Expect = 2.7
Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +2
Query: 260 VGSIVGIYNGKTFNQVEIKPE-MIGHYLGEFSVTYKPVKH 376
+G +YNGK + V + + MIGH GEFS T K H
Sbjct: 46 LGLKFAVYNGKDYIPVSVNDQNMIGHKFGEFSPTRKFAGH 85
>UniRef50_A1DE43 Cluster: Mitochondrial ribosomal protein S19,
putative; n=2; Pezizomycotina|Rep: Mitochondrial
ribosomal protein S19, putative - Neosartorya fischeri
(strain ATCC 1020 / DSM 3700 / NRRL 181)(Aspergillus
fischerianus (strain ATCC 1020 / DSM 3700 / NRRL 181))
Length = 89
Score = 33.5 bits (73), Expect = 2.7
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = +2
Query: 260 VGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYK 364
VG ++NGKT+ V I +M+G LGE+ T K
Sbjct: 45 VGLRFAVHNGKTYQDVLITEDMVGRKLGEYVPTRK 79
>UniRef50_Q0QIR8 Cluster: Ribosomal protein S19; n=1;
Oltmannsiellopsis viridis|Rep: Ribosomal protein S19 -
Oltmannsiellopsis viridis (Marine flagellate)
Length = 78
Score = 32.7 bits (71), Expect = 4.7
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +2
Query: 278 IYNGKTFNQVEIKPEMIGHYLGEFSVTYK 364
I+NGK F + + E IGH GEF+ T K
Sbjct: 43 IFNGKRFIRFRVTEETIGHKFGEFASTRK 71
>UniRef50_P34772 Cluster: Plastid 30S ribosomal protein S19; n=1;
Euglena longa|Rep: Plastid 30S ribosomal protein S19 -
Astasia longa (Euglenophycean alga)
Length = 118
Score = 32.7 bits (71), Expect = 4.7
Identities = 16/34 (47%), Positives = 20/34 (58%)
Frame = +2
Query: 257 MVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVT 358
MVG + +YNGK + I +MI LGEFS T
Sbjct: 44 MVGHNISVYNGKNYVPFLILNQMISSKLGEFSRT 77
>UniRef50_A6LS35 Cluster: SMC domain protein; n=1; Clostridium
beijerinckii NCIMB 8052|Rep: SMC domain protein -
Clostridium beijerinckii NCIMB 8052
Length = 1163
Score = 31.9 bits (69), Expect = 8.2
Identities = 18/71 (25%), Positives = 33/71 (46%)
Frame = +2
Query: 206 EARDREDSLEXHDHRSQMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGRP 385
E +D D +H+ ++G + ++ GK F + + + + E S K + HG
Sbjct: 980 EQKDLLDKKMKLEHKLALLGDLEKLFKGKKFVEF-VAVSKLKYVSVEASKRLKEITHGNY 1038
Query: 386 GIXATHSSRFI 418
G+ +SRFI
Sbjct: 1039 GLEVDDNSRFI 1049
>UniRef50_Q9TAJ3 Cluster: Ribosomal protein S19; n=1; Cafeteria
roenbergensis|Rep: Ribosomal protein S19 - Cafeteria
roenbergensis
Length = 84
Score = 31.9 bits (69), Expect = 8.2
Identities = 13/37 (35%), Positives = 24/37 (64%)
Frame = +2
Query: 272 VGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGR 382
VG+++G TF ++ M+G+ LGEF T + ++G+
Sbjct: 47 VGVHDGYTFFKLTPNASMVGYKLGEFVRTRQAFRYGK 83
>UniRef50_Q6UVU3 Cluster: Ribosomal protein S19; n=1;
Pseudendoclonium akinetum|Rep: Ribosomal protein S19 -
Pseudendoclonium akinetum (Green alga)
Length = 116
Score = 31.9 bits (69), Expect = 8.2
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +2
Query: 257 MVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYK 364
M+G+ V I+ G F ++ I +G+ LGEF+ T K
Sbjct: 71 MIGNTVKIHTGHKFVKLSITEHTVGYKLGEFAPTKK 106
>UniRef50_Q6FLN2 Cluster: Similar to sp|P18480 Saccharomyces
cerevisiae YBR289w SNF5; n=1; Candida glabrata|Rep:
Similar to sp|P18480 Saccharomyces cerevisiae YBR289w
SNF5 - Candida glabrata (Yeast) (Torulopsis glabrata)
Length = 1030
Score = 31.9 bits (69), Expect = 8.2
Identities = 11/33 (33%), Positives = 22/33 (66%)
Frame = -3
Query: 248 DDHVSQVSLHDLWLLIRRSLFLGATQLLDQCHW 150
++H+S++ D+ + I+ + +G TQL+DQ W
Sbjct: 493 EEHLSRIGGDDMRITIKLDIVVGQTQLIDQFEW 525
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 431,854,056
Number of Sequences: 1657284
Number of extensions: 7423996
Number of successful extensions: 16663
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 16248
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16652
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 29273652170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -