Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV31030.Seq
(609 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X56932-1|CAA40254.1| 203|Homo sapiens 23 kD highly basic protei... 146 7e-35
BC071929-1|AAH71929.1| 203|Homo sapiens ribosomal protein L13a ... 146 7e-35
BC070223-1|AAH70223.1| 203|Homo sapiens ribosomal protein L13a ... 146 7e-35
BC065236-1|AAH65236.1| 203|Homo sapiens ribosomal protein L13a ... 146 7e-35
BC062537-1|AAH62537.1| 203|Homo sapiens ribosomal protein L13a ... 146 7e-35
BC004900-1|AAH04900.2| 201|Homo sapiens RPL13A protein protein. 146 7e-35
BC001836-1|AAH01836.1| 203|Homo sapiens ribosomal protein L13a ... 146 7e-35
BC001675-1|AAH01675.1| 203|Homo sapiens ribosomal protein L13a ... 146 7e-35
BC000514-1|AAH00514.1| 203|Homo sapiens ribosomal protein L13a ... 146 7e-35
AK222747-1|BAD96467.1| 203|Homo sapiens ribosomal protein L13a ... 146 7e-35
AB028893-1|BAA88214.1| 203|Homo sapiens ribosomal protein L13a ... 146 7e-35
AL356120-1|CAH73036.1| 203|Homo sapiens protein ( Human DNA seq... 138 1e-32
BC105605-1|AAI05606.1| 142|Homo sapiens RPL13A protein protein. 87 3e-17
AB082924-1|BAC16800.1| 142|Homo sapiens ribosomal protein L13a ... 86 1e-16
BC067891-1|AAH67891.1| 102|Homo sapiens Unknown (protein for MG... 63 6e-10
AB011181-1|BAA25535.3| 769|Homo sapiens KIAA0609 protein protein. 33 0.79
BC004907-1|AAH04907.2| 551|Homo sapiens EPS8-like 1 protein. 31 3.2
>X56932-1|CAA40254.1| 203|Homo sapiens 23 kD highly basic protein
protein.
Length = 203
Score = 146 bits (353), Expect = 7e-35
Identities = 64/86 (74%), Positives = 77/86 (89%)
Frame = +1
Query: 1 HLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNVNPARGPFHF 180
HLLGRLAA++AK +L G KVVVVRCE INISGNF+RNKLK ++FLRKR N NP+RGP+HF
Sbjct: 14 HLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNPSRGPYHF 73
Query: 181 RAPSKILWKTVRGMIPHKTERGKNAL 258
RAPS+I W+TVRGM+PHKT+RG+ AL
Sbjct: 74 RAPSRIFWRTVRGMLPHKTKRGQAAL 99
Score = 85.8 bits (203), Expect = 1e-16
Identities = 39/112 (34%), Positives = 62/112 (55%)
Frame = +3
Query: 225 PTQNRAWQECLRRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRNYCHVGRLSHEIGWK 404
P + + Q L RL+ +DG PPP+D LKP R + ++GRL+HE+GWK
Sbjct: 89 PHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAALKVVRLKPTRKFAYLGRLAHEVGWK 148
Query: 405 YRDVVRKLEDKRKGKAVKRVAYEKKLKRITKDAGXRCRRRQHHFTTIIQSYG 560
Y+ V LE+KRK KA +K+L R+ K A ++ +T +++++G
Sbjct: 149 YQAVTATLEEKRKEKAKIHYRKKKQLMRLRKQAEKNVEKKIDKYTEVLKTHG 200
>BC071929-1|AAH71929.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 146 bits (353), Expect = 7e-35
Identities = 64/86 (74%), Positives = 77/86 (89%)
Frame = +1
Query: 1 HLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNVNPARGPFHF 180
HLLGRLAA++AK +L G KVVVVRCE INISGNF+RNKLK ++FLRKR N NP+RGP+HF
Sbjct: 14 HLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNPSRGPYHF 73
Query: 181 RAPSKILWKTVRGMIPHKTERGKNAL 258
RAPS+I W+TVRGM+PHKT+RG+ AL
Sbjct: 74 RAPSRIFWRTVRGMLPHKTKRGQAAL 99
Score = 85.8 bits (203), Expect = 1e-16
Identities = 39/112 (34%), Positives = 62/112 (55%)
Frame = +3
Query: 225 PTQNRAWQECLRRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRNYCHVGRLSHEIGWK 404
P + + Q L RL+ +DG PPP+D LKP R + ++GRL+HE+GWK
Sbjct: 89 PHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAALKVVRLKPTRKFAYLGRLAHEVGWK 148
Query: 405 YRDVVRKLEDKRKGKAVKRVAYEKKLKRITKDAGXRCRRRQHHFTTIIQSYG 560
Y+ V LE+KRK KA +K+L R+ K A ++ +T +++++G
Sbjct: 149 YQAVTATLEEKRKEKAKIHYRKKKQLMRLRKQAEKNVEKKIDKYTEVLKTHG 200
>BC070223-1|AAH70223.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 146 bits (353), Expect = 7e-35
Identities = 64/86 (74%), Positives = 77/86 (89%)
Frame = +1
Query: 1 HLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNVNPARGPFHF 180
HLLGRLAA++AK +L G KVVVVRCE INISGNF+RNKLK ++FLRKR N NP+RGP+HF
Sbjct: 14 HLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNPSRGPYHF 73
Query: 181 RAPSKILWKTVRGMIPHKTERGKNAL 258
RAPS+I W+TVRGM+PHKT+RG+ AL
Sbjct: 74 RAPSRIFWRTVRGMLPHKTKRGQAAL 99
Score = 85.8 bits (203), Expect = 1e-16
Identities = 39/112 (34%), Positives = 62/112 (55%)
Frame = +3
Query: 225 PTQNRAWQECLRRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRNYCHVGRLSHEIGWK 404
P + + Q L RL+ +DG PPP+D LKP R + ++GRL+HE+GWK
Sbjct: 89 PHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAALKVVRLKPTRKFAYLGRLAHEVGWK 148
Query: 405 YRDVVRKLEDKRKGKAVKRVAYEKKLKRITKDAGXRCRRRQHHFTTIIQSYG 560
Y+ V LE+KRK KA +K+L R+ K A ++ +T +++++G
Sbjct: 149 YQAVTATLEEKRKEKAKIHYRKKKQLMRLRKQAEKNVEKKIDKYTEVLKTHG 200
>BC065236-1|AAH65236.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 146 bits (353), Expect = 7e-35
Identities = 64/86 (74%), Positives = 77/86 (89%)
Frame = +1
Query: 1 HLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNVNPARGPFHF 180
HLLGRLAA++AK +L G KVVVVRCE INISGNF+RNKLK ++FLRKR N NP+RGP+HF
Sbjct: 14 HLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNPSRGPYHF 73
Query: 181 RAPSKILWKTVRGMIPHKTERGKNAL 258
RAPS+I W+TVRGM+PHKT+RG+ AL
Sbjct: 74 RAPSRIFWRTVRGMLPHKTKRGQAAL 99
Score = 85.8 bits (203), Expect = 1e-16
Identities = 39/112 (34%), Positives = 62/112 (55%)
Frame = +3
Query: 225 PTQNRAWQECLRRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRNYCHVGRLSHEIGWK 404
P + + Q L RL+ +DG PPP+D LKP R + ++GRL+HE+GWK
Sbjct: 89 PHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAALKVVRLKPTRKFAYLGRLAHEVGWK 148
Query: 405 YRDVVRKLEDKRKGKAVKRVAYEKKLKRITKDAGXRCRRRQHHFTTIIQSYG 560
Y+ V LE+KRK KA +K+L R+ K A ++ +T +++++G
Sbjct: 149 YQAVTATLEEKRKEKAKIHYRKKKQLMRLRKQAEKNVEKKIDKYTEVLKTHG 200
>BC062537-1|AAH62537.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 146 bits (353), Expect = 7e-35
Identities = 64/86 (74%), Positives = 77/86 (89%)
Frame = +1
Query: 1 HLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNVNPARGPFHF 180
HLLGRLAA++AK +L G KVVVVRCE INISGNF+RNKLK ++FLRKR N NP+RGP+HF
Sbjct: 14 HLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNPSRGPYHF 73
Query: 181 RAPSKILWKTVRGMIPHKTERGKNAL 258
RAPS+I W+TVRGM+PHKT+RG+ AL
Sbjct: 74 RAPSRIFWRTVRGMLPHKTKRGQAAL 99
Score = 85.8 bits (203), Expect = 1e-16
Identities = 39/112 (34%), Positives = 62/112 (55%)
Frame = +3
Query: 225 PTQNRAWQECLRRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRNYCHVGRLSHEIGWK 404
P + + Q L RL+ +DG PPP+D LKP R + ++GRL+HE+GWK
Sbjct: 89 PHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAALKVVRLKPTRKFAYLGRLAHEVGWK 148
Query: 405 YRDVVRKLEDKRKGKAVKRVAYEKKLKRITKDAGXRCRRRQHHFTTIIQSYG 560
Y+ V LE+KRK KA +K+L R+ K A ++ +T +++++G
Sbjct: 149 YQAVTATLEEKRKEKAKIHYRKKKQLMRLRKQAEKNVEKKIDKYTEVLKTHG 200
>BC004900-1|AAH04900.2| 201|Homo sapiens RPL13A protein protein.
Length = 201
Score = 146 bits (353), Expect = 7e-35
Identities = 64/86 (74%), Positives = 77/86 (89%)
Frame = +1
Query: 1 HLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNVNPARGPFHF 180
HLLGRLAA++AK +L G KVVVVRCE INISGNF+RNKLK ++FLRKR N NP+RGP+HF
Sbjct: 12 HLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNPSRGPYHF 71
Query: 181 RAPSKILWKTVRGMIPHKTERGKNAL 258
RAPS+I W+TVRGM+PHKT+RG+ AL
Sbjct: 72 RAPSRIFWRTVRGMLPHKTKRGQAAL 97
Score = 85.8 bits (203), Expect = 1e-16
Identities = 39/112 (34%), Positives = 62/112 (55%)
Frame = +3
Query: 225 PTQNRAWQECLRRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRNYCHVGRLSHEIGWK 404
P + + Q L RL+ +DG PPP+D LKP R + ++GRL+HE+GWK
Sbjct: 87 PHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAALKVVRLKPTRKFAYLGRLAHEVGWK 146
Query: 405 YRDVVRKLEDKRKGKAVKRVAYEKKLKRITKDAGXRCRRRQHHFTTIIQSYG 560
Y+ V LE+KRK KA +K+L R+ K A ++ +T +++++G
Sbjct: 147 YQAVTATLEEKRKEKAKIHYRKKKQLMRLRKQAEKNVEKKIDKYTEVLKTHG 198
>BC001836-1|AAH01836.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 146 bits (353), Expect = 7e-35
Identities = 64/86 (74%), Positives = 77/86 (89%)
Frame = +1
Query: 1 HLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNVNPARGPFHF 180
HLLGRLAA++AK +L G KVVVVRCE INISGNF+RNKLK ++FLRKR N NP+RGP+HF
Sbjct: 14 HLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNPSRGPYHF 73
Query: 181 RAPSKILWKTVRGMIPHKTERGKNAL 258
RAPS+I W+TVRGM+PHKT+RG+ AL
Sbjct: 74 RAPSRIFWRTVRGMLPHKTKRGQAAL 99
Score = 85.8 bits (203), Expect = 1e-16
Identities = 39/112 (34%), Positives = 62/112 (55%)
Frame = +3
Query: 225 PTQNRAWQECLRRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRNYCHVGRLSHEIGWK 404
P + + Q L RL+ +DG PPP+D LKP R + ++GRL+HE+GWK
Sbjct: 89 PHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAALKVVRLKPTRKFAYLGRLAHEVGWK 148
Query: 405 YRDVVRKLEDKRKGKAVKRVAYEKKLKRITKDAGXRCRRRQHHFTTIIQSYG 560
Y+ V LE+KRK KA +K+L R+ K A ++ +T +++++G
Sbjct: 149 YQAVTATLEEKRKEKAKIHYRKKKQLMRLRKQAEKNVEKKIDKYTEVLKTHG 200
>BC001675-1|AAH01675.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 146 bits (353), Expect = 7e-35
Identities = 64/86 (74%), Positives = 77/86 (89%)
Frame = +1
Query: 1 HLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNVNPARGPFHF 180
HLLGRLAA++AK +L G KVVVVRCE INISGNF+RNKLK ++FLRKR N NP+RGP+HF
Sbjct: 14 HLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNPSRGPYHF 73
Query: 181 RAPSKILWKTVRGMIPHKTERGKNAL 258
RAPS+I W+TVRGM+PHKT+RG+ AL
Sbjct: 74 RAPSRIFWRTVRGMLPHKTKRGQAAL 99
Score = 85.8 bits (203), Expect = 1e-16
Identities = 39/112 (34%), Positives = 62/112 (55%)
Frame = +3
Query: 225 PTQNRAWQECLRRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRNYCHVGRLSHEIGWK 404
P + + Q L RL+ +DG PPP+D LKP R + ++GRL+HE+GWK
Sbjct: 89 PHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAALKVVRLKPTRKFAYLGRLAHEVGWK 148
Query: 405 YRDVVRKLEDKRKGKAVKRVAYEKKLKRITKDAGXRCRRRQHHFTTIIQSYG 560
Y+ V LE+KRK KA +K+L R+ K A ++ +T +++++G
Sbjct: 149 YQAVTATLEEKRKEKAKIHYRKKKQLMRLRKQAEKNVEKKIDKYTEVLKTHG 200
>BC000514-1|AAH00514.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 146 bits (353), Expect = 7e-35
Identities = 64/86 (74%), Positives = 77/86 (89%)
Frame = +1
Query: 1 HLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNVNPARGPFHF 180
HLLGRLAA++AK +L G KVVVVRCE INISGNF+RNKLK ++FLRKR N NP+RGP+HF
Sbjct: 14 HLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNPSRGPYHF 73
Query: 181 RAPSKILWKTVRGMIPHKTERGKNAL 258
RAPS+I W+TVRGM+PHKT+RG+ AL
Sbjct: 74 RAPSRIFWRTVRGMLPHKTKRGQAAL 99
Score = 85.8 bits (203), Expect = 1e-16
Identities = 39/112 (34%), Positives = 62/112 (55%)
Frame = +3
Query: 225 PTQNRAWQECLRRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRNYCHVGRLSHEIGWK 404
P + + Q L RL+ +DG PPP+D LKP R + ++GRL+HE+GWK
Sbjct: 89 PHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAALKVVRLKPTRKFAYLGRLAHEVGWK 148
Query: 405 YRDVVRKLEDKRKGKAVKRVAYEKKLKRITKDAGXRCRRRQHHFTTIIQSYG 560
Y+ V LE+KRK KA +K+L R+ K A ++ +T +++++G
Sbjct: 149 YQAVTATLEEKRKEKAKIHYRKKKQLMRLRKQAEKNVEKKIDKYTEVLKTHG 200
>AK222747-1|BAD96467.1| 203|Homo sapiens ribosomal protein L13a
variant protein.
Length = 203
Score = 146 bits (353), Expect = 7e-35
Identities = 64/86 (74%), Positives = 77/86 (89%)
Frame = +1
Query: 1 HLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNVNPARGPFHF 180
HLLGRLAA++AK +L G KVVVVRCE INISGNF+RNKLK ++FLRKR N NP+RGP+HF
Sbjct: 14 HLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNPSRGPYHF 73
Query: 181 RAPSKILWKTVRGMIPHKTERGKNAL 258
RAPS+I W+TVRGM+PHKT+RG+ AL
Sbjct: 74 RAPSRIFWRTVRGMLPHKTKRGQAAL 99
Score = 83.8 bits (198), Expect = 4e-16
Identities = 38/112 (33%), Positives = 61/112 (54%)
Frame = +3
Query: 225 PTQNRAWQECLRRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRNYCHVGRLSHEIGWK 404
P + + Q L L+ +DG PPP+D LKP R + ++GRL+HE+GWK
Sbjct: 89 PHKTKRGQAALDHLKVFDGIPPPYDKKKRMVVPAALKVVRLKPTRKFAYLGRLAHEVGWK 148
Query: 405 YRDVVRKLEDKRKGKAVKRVAYEKKLKRITKDAGXRCRRRQHHFTTIIQSYG 560
Y+ V LE+KRK KA +K+L R+ K A ++ +T +++++G
Sbjct: 149 YQAVTATLEEKRKEKAKIHYRKKKQLMRLRKQAEKNVEKKIDKYTEVLKTHG 200
>AB028893-1|BAA88214.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 146 bits (353), Expect = 7e-35
Identities = 64/86 (74%), Positives = 77/86 (89%)
Frame = +1
Query: 1 HLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNVNPARGPFHF 180
HLLGRLAA++AK +L G KVVVVRCE INISGNF+RNKLK ++FLRKR N NP+RGP+HF
Sbjct: 14 HLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNPSRGPYHF 73
Query: 181 RAPSKILWKTVRGMIPHKTERGKNAL 258
RAPS+I W+TVRGM+PHKT+RG+ AL
Sbjct: 74 RAPSRIFWRTVRGMLPHKTKRGQAAL 99
Score = 85.8 bits (203), Expect = 1e-16
Identities = 39/112 (34%), Positives = 62/112 (55%)
Frame = +3
Query: 225 PTQNRAWQECLRRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRNYCHVGRLSHEIGWK 404
P + + Q L RL+ +DG PPP+D LKP R + ++GRL+HE+GWK
Sbjct: 89 PHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAALKVVRLKPTRKFAYLGRLAHEVGWK 148
Query: 405 YRDVVRKLEDKRKGKAVKRVAYEKKLKRITKDAGXRCRRRQHHFTTIIQSYG 560
Y+ V LE+KRK KA +K+L R+ K A ++ +T +++++G
Sbjct: 149 YQAVTATLEEKRKEKAKIHYRKKKQLMRLRKQAEKNVEKKIDKYTEVLKTHG 200
>AL356120-1|CAH73036.1| 203|Homo sapiens protein ( Human DNA
sequence from clone RP11-365K22 on chromosome 13
Contains a novel gene similar to ribosomal protein L13a
(RPL13A). ).
Length = 203
Score = 138 bits (334), Expect = 1e-32
Identities = 60/86 (69%), Positives = 75/86 (87%)
Frame = +1
Query: 1 HLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNVNPARGPFHF 180
HLLGRLAA++AK +L G KVVVV CE INISGNF+RNKL ++FLRKR N +P+RGP+HF
Sbjct: 14 HLLGRLAAIVAKQVLLGRKVVVVCCEGINISGNFYRNKLNYLAFLRKRMNTSPSRGPYHF 73
Query: 181 RAPSKILWKTVRGMIPHKTERGKNAL 258
RAPS++ W+TVRGM+PHKT+RG+ AL
Sbjct: 74 RAPSRVFWRTVRGMLPHKTKRGQAAL 99
Score = 83.8 bits (198), Expect = 4e-16
Identities = 39/112 (34%), Positives = 61/112 (54%)
Frame = +3
Query: 225 PTQNRAWQECLRRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRNYCHVGRLSHEIGWK 404
P + + Q L RL+ DG PPP+D LKP R + ++GRL+HE+GWK
Sbjct: 89 PHKTKRGQAALDRLKVSDGIPPPYDKKKRMVVPAALKVVRLKPTRKFAYLGRLAHEVGWK 148
Query: 405 YRDVVRKLEDKRKGKAVKRVAYEKKLKRITKDAGXRCRRRQHHFTTIIQSYG 560
Y+ V LE+KRK KA +K+L R+ K A ++ +T +++++G
Sbjct: 149 YQAVTATLEEKRKEKAKIHYRKKKQLMRLRKQAEKNVEKKIDKYTEVLKTHG 200
>BC105605-1|AAI05606.1| 142|Homo sapiens RPL13A protein protein.
Length = 142
Score = 87.4 bits (207), Expect = 3e-17
Identities = 40/112 (35%), Positives = 62/112 (55%)
Frame = +3
Query: 225 PTQNRAWQECLRRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRNYCHVGRLSHEIGWK 404
P + + Q L RL+ +DG PPP+D LKP R + ++GRL+HE+GWK
Sbjct: 28 PHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAALKVVRLKPTRKFAYLGRLAHEVGWK 87
Query: 405 YRDVVRKLEDKRKGKAVKRVAYEKKLKRITKDAGXRCRRRQHHFTTIIQSYG 560
Y+ V LEDKRK KA +K+L R+ K A ++ +T +++++G
Sbjct: 88 YQAVTATLEDKRKEKAKIHYRKKKQLMRLRKQAEKNVEKKIDKYTEVLKTHG 139
Score = 70.5 bits (165), Expect = 4e-12
Identities = 27/37 (72%), Positives = 34/37 (91%)
Frame = +1
Query: 148 NVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKNAL 258
N NP+RGP+HFRAPS+I W+TVRGM+PHKT+RG+ AL
Sbjct: 2 NTNPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAAL 38
>AB082924-1|BAC16800.1| 142|Homo sapiens ribosomal protein L13a
protein.
Length = 142
Score = 85.8 bits (203), Expect = 1e-16
Identities = 39/112 (34%), Positives = 62/112 (55%)
Frame = +3
Query: 225 PTQNRAWQECLRRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRNYCHVGRLSHEIGWK 404
P + + Q L RL+ +DG PPP+D LKP R + ++GRL+HE+GWK
Sbjct: 28 PHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAALKVVRLKPTRKFAYLGRLAHEVGWK 87
Query: 405 YRDVVRKLEDKRKGKAVKRVAYEKKLKRITKDAGXRCRRRQHHFTTIIQSYG 560
Y+ V LE+KRK KA +K+L R+ K A ++ +T +++++G
Sbjct: 88 YQAVTATLEEKRKEKAKIHYRKKKQLMRLRKQAEKNVEKKIDKYTEVLKTHG 139
Score = 70.5 bits (165), Expect = 4e-12
Identities = 27/37 (72%), Positives = 34/37 (91%)
Frame = +1
Query: 148 NVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKNAL 258
N NP+RGP+HFRAPS+I W+TVRGM+PHKT+RG+ AL
Sbjct: 2 NTNPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAAL 38
>BC067891-1|AAH67891.1| 102|Homo sapiens Unknown (protein for
MGC:87657) protein.
Length = 102
Score = 63.3 bits (147), Expect = 6e-10
Identities = 34/96 (35%), Positives = 48/96 (50%)
Frame = +3
Query: 216 RHDPTQNRAWQECLRRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRNYCHVGRLSHEI 395
RH + A +CL+ +DG PPP+D LKP R + +GR + E+
Sbjct: 3 RHKTKRGHASLDCLK---VFDGIPPPYDKKKRMVVPAALKVVRLKPTRKFALLGRQAQEV 59
Query: 396 GWKYRDVVRKLEDKRKGKAVKRVAYEKKLKRITKDA 503
WKY+ V LE+KRK KA +K+L R+ K A
Sbjct: 60 RWKYQAVTATLEEKRKEKAKIHYWKKKQLMRLRKQA 95
>AB011181-1|BAA25535.3| 769|Homo sapiens KIAA0609 protein protein.
Length = 769
Score = 33.1 bits (72), Expect = 0.79
Identities = 19/57 (33%), Positives = 30/57 (52%)
Frame = +2
Query: 11 AVWRQSSPRSFSKGTKLLWFAANKSTSLATSLGTNSSLCHSCVRGAT*ILLVDLSIL 181
+ WRQS PR + +G + L A ++ T+L + T+ + C RG L LS+L
Sbjct: 30 SAWRQSRPREYYEGGRGL-HAPDRETALGLGIATSERMLGIC-RGRRKFLAASLSLL 84
>BC004907-1|AAH04907.2| 551|Homo sapiens EPS8-like 1 protein.
Length = 551
Score = 31.1 bits (67), Expect = 3.2
Identities = 17/42 (40%), Positives = 23/42 (54%)
Frame = +3
Query: 360 NYCHVGRLSHEIGWKYRDVVRKLEDKRKGKAVKRVAYEKKLK 485
NY R S E+ K RDV+ LEDK K ++ V ++K K
Sbjct: 500 NYDFQARNSSELSVKQRDVLEVLEDKEKVSELEAVMEKQKKK 541
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,754,303
Number of Sequences: 237096
Number of extensions: 2109282
Number of successful extensions: 11958
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 11757
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11936
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6466646650
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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