Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV31030.Seq
(609 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY051640-1|AAK93064.1| 205|Drosophila melanogaster GM13948p pro... 148 7e-36
AE014297-307|AAF51987.1| 205|Drosophila melanogaster CG1475-PB ... 148 7e-36
AF251006-1|AAK28427.1| 1500|Drosophila melanogaster host cell fa... 32 0.53
BT015268-1|AAT94497.1| 1500|Drosophila melanogaster LD29768p pro... 31 1.2
AY060983-1|AAL28531.1| 883|Drosophila melanogaster GM14007p pro... 31 1.2
AJ320236-1|CAC44472.1| 1500|Drosophila melanogaster host cell fa... 31 1.2
AE014135-74|AAS64608.1| 1500|Drosophila melanogaster CG1710-PD, ... 31 1.2
AE014135-73|AAN06530.1| 1500|Drosophila melanogaster CG1710-PC, ... 31 1.2
AE014135-72|AAN06529.1| 1500|Drosophila melanogaster CG1710-PB, ... 31 1.2
AE014135-71|AAF59349.2| 1500|Drosophila melanogaster CG1710-PA, ... 31 1.2
BT015287-1|AAT94516.1| 538|Drosophila melanogaster GH14381p pro... 29 5.0
AY051950-1|AAK93374.1| 575|Drosophila melanogaster LD42169p pro... 29 5.0
AE014297-1440|AAF54738.1| 538|Drosophila melanogaster CG3571-PB... 29 5.0
AE014297-1439|AAF54737.1| 575|Drosophila melanogaster CG3571-PA... 29 5.0
>AY051640-1|AAK93064.1| 205|Drosophila melanogaster GM13948p
protein.
Length = 205
Score = 148 bits (358), Expect = 7e-36
Identities = 63/86 (73%), Positives = 79/86 (91%)
Frame = +1
Query: 1 HLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNVNPARGPFHF 180
HLLGRLA+V+AK LL+G KV VVRCE++N+SG+F+RNK+K +++LRKRCNVNPARGPFHF
Sbjct: 16 HLLGRLASVVAKYLLQGGKVAVVRCEELNLSGHFYRNKIKFLAYLRKRCNVNPARGPFHF 75
Query: 181 RAPSKILWKTVRGMIPHKTERGKNAL 258
RAPS+I +K VRGMIPHKT+RG+ AL
Sbjct: 76 RAPSRIFYKAVRGMIPHKTKRGQAAL 101
Score = 95.5 bits (227), Expect = 5e-20
Identities = 44/113 (38%), Positives = 61/113 (53%)
Frame = +3
Query: 225 PTQNRAWQECLRRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRNYCHVGRLSHEIGWK 404
P + + Q L RLR +DG P P+D L+ R YC VGRLSHE+GW
Sbjct: 91 PHKTKRGQAALARLRVFDGIPSPYDKRRRVVVPIAMRVLTLRSDRKYCQVGRLSHEVGWH 150
Query: 405 YRDVVRKLEDKRKGKAVKRVAYEKKLKRITKDAGXRCRRRQHHFTTIIQSYGY 563
Y+DV++ LE KRK K + + ++LK++T A + F II+SYGY
Sbjct: 151 YQDVIKSLERKRKAKLRVTLKHNRELKKLTVKARENIAKAAEPFNKIIKSYGY 203
>AE014297-307|AAF51987.1| 205|Drosophila melanogaster CG1475-PB
protein.
Length = 205
Score = 148 bits (358), Expect = 7e-36
Identities = 63/86 (73%), Positives = 79/86 (91%)
Frame = +1
Query: 1 HLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNVNPARGPFHF 180
HLLGRLA+V+AK LL+G KV VVRCE++N+SG+F+RNK+K +++LRKRCNVNPARGPFHF
Sbjct: 16 HLLGRLASVVAKYLLQGGKVAVVRCEELNLSGHFYRNKIKFLAYLRKRCNVNPARGPFHF 75
Query: 181 RAPSKILWKTVRGMIPHKTERGKNAL 258
RAPS+I +K VRGMIPHKT+RG+ AL
Sbjct: 76 RAPSRIFYKAVRGMIPHKTKRGQAAL 101
Score = 95.5 bits (227), Expect = 5e-20
Identities = 44/113 (38%), Positives = 61/113 (53%)
Frame = +3
Query: 225 PTQNRAWQECLRRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRNYCHVGRLSHEIGWK 404
P + + Q L RLR +DG P P+D L+ R YC VGRLSHE+GW
Sbjct: 91 PHKTKRGQAALARLRVFDGIPSPYDKRRRVVVPIAMRVLTLRSDRKYCQVGRLSHEVGWH 150
Query: 405 YRDVVRKLEDKRKGKAVKRVAYEKKLKRITKDAGXRCRRRQHHFTTIIQSYGY 563
Y+DV++ LE KRK K + + ++LK++T A + F II+SYGY
Sbjct: 151 YQDVIKSLERKRKAKLRVTLKHNRELKKLTVKARENIAKAAEPFNKIIKSYGY 203
>AF251006-1|AAK28427.1| 1500|Drosophila melanogaster host cell factor
HCF protein.
Length = 1500
Score = 32.3 bits (70), Expect = 0.53
Identities = 20/70 (28%), Positives = 29/70 (41%), Gaps = 4/70 (5%)
Frame = +1
Query: 361 ITVM*ADCPMKLDGNTVMLFVSLKTRGRARLLRELPMKR----NLRGSPRMLVKGVEGXN 528
+TVM + M GN VM+ + L K+ N GSPR + + N
Sbjct: 919 VTVMSTNTSMAASGNKVMVLPGTSSNNSPATTTALSAKKSFVFNAGGSPRTVTLATKSIN 978
Query: 529 TISLPSSNPM 558
S+P S P+
Sbjct: 979 AKSIPQSQPV 988
>BT015268-1|AAT94497.1| 1500|Drosophila melanogaster LD29768p protein.
Length = 1500
Score = 31.1 bits (67), Expect = 1.2
Identities = 19/70 (27%), Positives = 29/70 (41%), Gaps = 4/70 (5%)
Frame = +1
Query: 361 ITVM*ADCPMKLDGNTVMLFVSLKTRGRARLLRELPMKR----NLRGSPRMLVKGVEGXN 528
+TVM + M GN VM+ + L ++ N GSPR + + N
Sbjct: 919 VTVMSTNTSMAASGNKVMVLPGTSSNNSPATTTALSARKSFVFNAGGSPRTVTLATKSIN 978
Query: 529 TISLPSSNPM 558
S+P S P+
Sbjct: 979 AKSIPQSQPV 988
>AY060983-1|AAL28531.1| 883|Drosophila melanogaster GM14007p
protein.
Length = 883
Score = 31.1 bits (67), Expect = 1.2
Identities = 19/70 (27%), Positives = 29/70 (41%), Gaps = 4/70 (5%)
Frame = +1
Query: 361 ITVM*ADCPMKLDGNTVMLFVSLKTRGRARLLRELPMKR----NLRGSPRMLVKGVEGXN 528
+TVM + M GN VM+ + L ++ N GSPR + + N
Sbjct: 302 VTVMSTNTSMAASGNKVMVLPGTSSNNSPATTTALSARKSFVFNAGGSPRTVTLATKSIN 361
Query: 529 TISLPSSNPM 558
S+P S P+
Sbjct: 362 AKSIPQSQPV 371
>AJ320236-1|CAC44472.1| 1500|Drosophila melanogaster host cell factor
protein.
Length = 1500
Score = 31.1 bits (67), Expect = 1.2
Identities = 19/70 (27%), Positives = 29/70 (41%), Gaps = 4/70 (5%)
Frame = +1
Query: 361 ITVM*ADCPMKLDGNTVMLFVSLKTRGRARLLRELPMKR----NLRGSPRMLVKGVEGXN 528
+TVM + M GN VM+ + L ++ N GSPR + + N
Sbjct: 919 VTVMSTNTSMAASGNKVMVLPGTSSNNSPATTTALSARKSFVFNAGGSPRTVTLATKSIN 978
Query: 529 TISLPSSNPM 558
S+P S P+
Sbjct: 979 AKSIPQSQPV 988
>AE014135-74|AAS64608.1| 1500|Drosophila melanogaster CG1710-PD,
isoform D protein.
Length = 1500
Score = 31.1 bits (67), Expect = 1.2
Identities = 19/70 (27%), Positives = 29/70 (41%), Gaps = 4/70 (5%)
Frame = +1
Query: 361 ITVM*ADCPMKLDGNTVMLFVSLKTRGRARLLRELPMKR----NLRGSPRMLVKGVEGXN 528
+TVM + M GN VM+ + L ++ N GSPR + + N
Sbjct: 919 VTVMSTNTSMAASGNKVMVLPGTSSNNSPATTTALSARKSFVFNAGGSPRTVTLATKSIN 978
Query: 529 TISLPSSNPM 558
S+P S P+
Sbjct: 979 AKSIPQSQPV 988
>AE014135-73|AAN06530.1| 1500|Drosophila melanogaster CG1710-PC,
isoform C protein.
Length = 1500
Score = 31.1 bits (67), Expect = 1.2
Identities = 19/70 (27%), Positives = 29/70 (41%), Gaps = 4/70 (5%)
Frame = +1
Query: 361 ITVM*ADCPMKLDGNTVMLFVSLKTRGRARLLRELPMKR----NLRGSPRMLVKGVEGXN 528
+TVM + M GN VM+ + L ++ N GSPR + + N
Sbjct: 919 VTVMSTNTSMAASGNKVMVLPGTSSNNSPATTTALSARKSFVFNAGGSPRTVTLATKSIN 978
Query: 529 TISLPSSNPM 558
S+P S P+
Sbjct: 979 AKSIPQSQPV 988
>AE014135-72|AAN06529.1| 1500|Drosophila melanogaster CG1710-PB,
isoform B protein.
Length = 1500
Score = 31.1 bits (67), Expect = 1.2
Identities = 19/70 (27%), Positives = 29/70 (41%), Gaps = 4/70 (5%)
Frame = +1
Query: 361 ITVM*ADCPMKLDGNTVMLFVSLKTRGRARLLRELPMKR----NLRGSPRMLVKGVEGXN 528
+TVM + M GN VM+ + L ++ N GSPR + + N
Sbjct: 919 VTVMSTNTSMAASGNKVMVLPGTSSNNSPATTTALSARKSFVFNAGGSPRTVTLATKSIN 978
Query: 529 TISLPSSNPM 558
S+P S P+
Sbjct: 979 AKSIPQSQPV 988
>AE014135-71|AAF59349.2| 1500|Drosophila melanogaster CG1710-PA,
isoform A protein.
Length = 1500
Score = 31.1 bits (67), Expect = 1.2
Identities = 19/70 (27%), Positives = 29/70 (41%), Gaps = 4/70 (5%)
Frame = +1
Query: 361 ITVM*ADCPMKLDGNTVMLFVSLKTRGRARLLRELPMKR----NLRGSPRMLVKGVEGXN 528
+TVM + M GN VM+ + L ++ N GSPR + + N
Sbjct: 919 VTVMSTNTSMAASGNKVMVLPGTSSNNSPATTTALSARKSFVFNAGGSPRTVTLATKSIN 978
Query: 529 TISLPSSNPM 558
S+P S P+
Sbjct: 979 AKSIPQSQPV 988
>BT015287-1|AAT94516.1| 538|Drosophila melanogaster GH14381p
protein.
Length = 538
Score = 29.1 bits (62), Expect = 5.0
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +1
Query: 187 PSKILWKTVRGMIPHKTERGKNALGGYVHMTG 282
P WKTV M+ +++ G L GYV+ G
Sbjct: 371 PKSNTWKTVAQMMKYRSAGGVTQLNGYVYALG 402
>AY051950-1|AAK93374.1| 575|Drosophila melanogaster LD42169p
protein.
Length = 575
Score = 29.1 bits (62), Expect = 5.0
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +1
Query: 187 PSKILWKTVRGMIPHKTERGKNALGGYVHMTG 282
P WKTV M+ +++ G L GYV+ G
Sbjct: 408 PKSNTWKTVAQMMKYRSAGGVTQLNGYVYALG 439
>AE014297-1440|AAF54738.1| 538|Drosophila melanogaster CG3571-PB,
isoform B protein.
Length = 538
Score = 29.1 bits (62), Expect = 5.0
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +1
Query: 187 PSKILWKTVRGMIPHKTERGKNALGGYVHMTG 282
P WKTV M+ +++ G L GYV+ G
Sbjct: 371 PKSNTWKTVAQMMKYRSAGGVTQLNGYVYALG 402
>AE014297-1439|AAF54737.1| 575|Drosophila melanogaster CG3571-PA,
isoform A protein.
Length = 575
Score = 29.1 bits (62), Expect = 5.0
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +1
Query: 187 PSKILWKTVRGMIPHKTERGKNALGGYVHMTG 282
P WKTV M+ +++ G L GYV+ G
Sbjct: 408 PKSNTWKTVAQMMKYRSAGGVTQLNGYVYALG 439
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,187,065
Number of Sequences: 53049
Number of extensions: 622791
Number of successful extensions: 1578
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1511
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1578
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2503659279
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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