Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV31029.Seq
         (598 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U50471-1|AAA93474.1|  135|Anopheles gambiae protein ( Anopheles ...   113   4e-27
AJ973471-1|CAJ01518.1|  122|Anopheles gambiae hypothetical prote...    24   4.3  
AJ697731-1|CAG26924.1|  122|Anopheles gambiae putative chemosens...    24   4.3  
AJ697730-1|CAG26923.1|  122|Anopheles gambiae putative chemosens...    24   4.3  
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    23   7.5  
AY943929-1|AAX49502.1|  755|Anopheles gambiae laccase-2 isoform ...    23   9.9  
AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform ...    23   9.9  
AY280612-1|AAQ21365.1|  309|Anopheles gambiae carbonic anhydrase...    23   9.9  

>U50471-1|AAA93474.1|  135|Anopheles gambiae protein ( Anopheles
           gambiae putativeribosomal protein S8 mRNA, complete cds.
           ).
          Length = 135

 Score =  113 bits (272), Expect = 4e-27
 Identities = 56/103 (54%), Positives = 70/103 (67%)
 Frame = +1

Query: 256 VYNASNNXLVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKXGAKLXXAXEAIXNKKR 435
           VYNASNN L+RTKTLVKNAI+V+DA+PFRQWYESHY LPLG+K   +L    E + +KKR
Sbjct: 11  VYNASNNELIRTKTLVKNAIIVIDASPFRQWYESHYLLPLGKK--RELKAGEEDVLSKKR 68

Query: 436 SXKTARKYLARQRLAKVEGALEXQSTQGVCWLAWRVAXGQCGR 564
           +    RKY+ RQ+ AK++ A+E Q   G          GQ GR
Sbjct: 69  TKSNLRKYVKRQKNAKIDPAVEEQFNAGRLLACISSRPGQVGR 111


>AJ973471-1|CAJ01518.1|  122|Anopheles gambiae hypothetical protein
           protein.
          Length = 122

 Score = 23.8 bits (49), Expect = 4.3
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -2

Query: 321 YNNCILDKGLCTHQ 280
           Y  C+LDKG CT +
Sbjct: 44  YLKCLLDKGPCTQE 57


>AJ697731-1|CAG26924.1|  122|Anopheles gambiae putative chemosensory
           protein CSP2 protein.
          Length = 122

 Score = 23.8 bits (49), Expect = 4.3
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -2

Query: 321 YNNCILDKGLCTHQ 280
           Y  C+LDKG CT +
Sbjct: 44  YLKCLLDKGPCTQE 57


>AJ697730-1|CAG26923.1|  122|Anopheles gambiae putative chemosensory
           protein CSP1 protein.
          Length = 122

 Score = 23.8 bits (49), Expect = 4.3
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -2

Query: 321 YNNCILDKGLCTHQ 280
           Y  C+LDKG CT +
Sbjct: 44  YLKCLLDKGPCTQE 57


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 23.0 bits (47), Expect = 7.5
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +3

Query: 111 LQTPGSALSESTPFVHVVEILSTV 182
           + TP  A++ STPF+    +LS +
Sbjct: 527 VNTPAGAINMSTPFIDSEIVLSAL 550


>AY943929-1|AAX49502.1|  755|Anopheles gambiae laccase-2 isoform B
           protein.
          Length = 755

 Score = 22.6 bits (46), Expect = 9.9
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = +1

Query: 325 DATPFRQWYESHYTLP 372
           D TP   W+ SH T P
Sbjct: 43  DQTPAGSWWSSHLTEP 58


>AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform A
           protein.
          Length = 753

 Score = 22.6 bits (46), Expect = 9.9
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = +1

Query: 325 DATPFRQWYESHYTLP 372
           D TP   W+ SH T P
Sbjct: 43  DQTPAGSWWSSHLTEP 58


>AY280612-1|AAQ21365.1|  309|Anopheles gambiae carbonic anhydrase
           protein.
          Length = 309

 Score = 22.6 bits (46), Expect = 9.9
 Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
 Frame = +2

Query: 137 RIHSVRSRGGNTKYRALRLDTGNFSWGSECSTRKTRI-IDVCIMH 268
           R  ++  +GG    R + LD  +F WGSE +   TR  +++ ++H
Sbjct: 94  RDSAITMQGGGLGGRFV-LDQMHFHWGSEHTLDDTRYGLELHLVH 137


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 617,533
Number of Sequences: 2352
Number of extensions: 12156
Number of successful extensions: 28
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 57609459
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)