Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV31029.Seq
(598 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF080430-1|AAC28863.2| 208|Apis mellifera ribosomal protein S8 ... 151 7e-39
DQ855485-1|ABH88172.1| 128|Apis mellifera chemosensory protein ... 24 1.3
AJ973400-1|CAJ01447.1| 128|Apis mellifera hypothetical protein ... 24 1.3
DQ855487-1|ABH88174.1| 125|Apis mellifera chemosensory protein ... 22 4.0
AJ973402-1|CAJ01449.1| 125|Apis mellifera hypothetical protein ... 22 4.0
D79207-1|BAA23639.1| 432|Apis mellifera milk protein protein. 22 5.3
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 22 5.3
AF388203-1|AAM73637.1| 432|Apis mellifera major royal jelly pro... 22 5.3
AF000633-1|AAC61895.1| 432|Apis mellifera major royal jelly pro... 22 5.3
Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein RJP... 21 6.9
Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein RJP... 21 6.9
AY313893-1|AAQ82184.1| 437|Apis mellifera major royal jelly pro... 21 6.9
AF004842-1|AAD01205.1| 598|Apis mellifera major royal jelly pro... 21 6.9
EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein. 21 9.2
EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein. 21 9.2
DQ855484-1|ABH88171.1| 130|Apis mellifera chemosensory protein ... 21 9.2
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 21 9.2
AJ973401-1|CAJ01448.1| 130|Apis mellifera hypothetical protein ... 21 9.2
AF481963-1|AAN59784.1| 130|Apis mellifera antennal-specific pro... 21 9.2
>AF080430-1|AAC28863.2| 208|Apis mellifera ribosomal protein S8
protein.
Length = 208
Score = 151 bits (365), Expect = 7e-39
Identities = 91/186 (48%), Positives = 105/186 (56%), Gaps = 2/186 (1%)
Frame = +1
Query: 13 MGISRDHWHKRRATGWETCAHTQEEEV*VXASRCKHQARPSA-NPLRSFTW-WKY*VPCA 186
MGISRDHWHKRRATG + ++ + + + P + +R+ KY
Sbjct: 1 MGISRDHWHKRRATGGKRKPIRKKRKFELGRPAANTKLGPQRIHTVRTRGGNKKYRALRL 60
Query: 187 ASGHR*LLLGIGMFNSQNPYH*CVYNASNNXLVRTKTLVKNAIVVVDATPFRQWYESHYT 366
+G+ G + VYNASNN LVRTKTLVKNAIV +DATPFRQWYE HY
Sbjct: 61 DTGN--FSWGSECTTRKTRIIDVVYNASNNELVRTKTLVKNAIVTIDATPFRQWYEGHYV 118
Query: 367 LPLGRKXGAKLXXAXEAIXNKKRSXKTARKYLARQRLAKVEGALEXQSTQGVCWLAWRVA 546
LPLGRK GAKL A E + NKKRS K KY ARQR AKVE ALE Q G
Sbjct: 119 LPLGRKRGAKLTEAEEEVLNKKRSKKAEAKYKARQRFAKVEPALEEQFATGRVLACISSR 178
Query: 547 XGQCGR 564
GQCGR
Sbjct: 179 PGQCGR 184
Score = 130 bits (313), Expect = 1e-32
Identities = 58/66 (87%), Positives = 63/66 (95%)
Frame = +2
Query: 59 GKRAPIRKKRKYELXRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSECSTRK 238
GKR PIRKKRK+EL RPAANT+LGPQRIH+VR+RGGN KYRALRLDTGNFSWGSEC+TRK
Sbjct: 16 GKRKPIRKKRKFELGRPAANTKLGPQRIHTVRTRGGNKKYRALRLDTGNFSWGSECTTRK 75
Query: 239 TRIIDV 256
TRIIDV
Sbjct: 76 TRIIDV 81
>DQ855485-1|ABH88172.1| 128|Apis mellifera chemosensory protein 4
protein.
Length = 128
Score = 23.8 bits (49), Expect = 1.3
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = -2
Query: 321 YNNCILDKGLCT 286
Y NC+LD+G CT
Sbjct: 46 YVNCLLDQGPCT 57
>AJ973400-1|CAJ01447.1| 128|Apis mellifera hypothetical protein
protein.
Length = 128
Score = 23.8 bits (49), Expect = 1.3
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = -2
Query: 321 YNNCILDKGLCT 286
Y NC+LD+G CT
Sbjct: 46 YVNCLLDQGPCT 57
>DQ855487-1|ABH88174.1| 125|Apis mellifera chemosensory protein 6
protein.
Length = 125
Score = 22.2 bits (45), Expect = 4.0
Identities = 7/14 (50%), Positives = 11/14 (78%)
Frame = -2
Query: 321 YNNCILDKGLCTHQ 280
Y C+LD+G CT++
Sbjct: 43 YIKCMLDEGPCTNE 56
>AJ973402-1|CAJ01449.1| 125|Apis mellifera hypothetical protein
protein.
Length = 125
Score = 22.2 bits (45), Expect = 4.0
Identities = 7/14 (50%), Positives = 11/14 (78%)
Frame = -2
Query: 321 YNNCILDKGLCTHQ 280
Y C+LD+G CT++
Sbjct: 43 YIKCMLDEGPCTNE 56
>D79207-1|BAA23639.1| 432|Apis mellifera milk protein protein.
Length = 432
Score = 21.8 bits (44), Expect = 5.3
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = -2
Query: 354 LIPLPEWSCIYYNNC 310
L P P+WS Y++C
Sbjct: 104 LQPYPDWSFAKYDDC 118
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 21.8 bits (44), Expect = 5.3
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -2
Query: 528 PANALCGLXF*STLNLSK 475
P N+LC L TLNL++
Sbjct: 163 PVNSLCSLDNLQTLNLTE 180
>AF388203-1|AAM73637.1| 432|Apis mellifera major royal jelly
protein MRJP1 protein.
Length = 432
Score = 21.8 bits (44), Expect = 5.3
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = -2
Query: 354 LIPLPEWSCIYYNNC 310
L P P+WS Y++C
Sbjct: 104 LQPYPDWSFAKYDDC 118
>AF000633-1|AAC61895.1| 432|Apis mellifera major royal jelly
protein MRJP1 protein.
Length = 432
Score = 21.8 bits (44), Expect = 5.3
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = -2
Query: 354 LIPLPEWSCIYYNNC 310
L P P+WS Y++C
Sbjct: 104 LQPYPDWSFAKYDDC 118
>Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein
RJP57-2 protein.
Length = 464
Score = 21.4 bits (43), Expect = 6.9
Identities = 7/15 (46%), Positives = 9/15 (60%)
Frame = -2
Query: 354 LIPLPEWSCIYYNNC 310
L P P+WS Y +C
Sbjct: 109 LQPYPDWSFAKYEDC 123
>Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein
RJP57-1 protein.
Length = 544
Score = 21.4 bits (43), Expect = 6.9
Identities = 7/15 (46%), Positives = 9/15 (60%)
Frame = -2
Query: 354 LIPLPEWSCIYYNNC 310
L P P+WS Y +C
Sbjct: 110 LRPYPDWSFAKYEDC 124
>AY313893-1|AAQ82184.1| 437|Apis mellifera major royal jelly
protein MRJP6 protein.
Length = 437
Score = 21.4 bits (43), Expect = 6.9
Identities = 7/15 (46%), Positives = 9/15 (60%)
Frame = -2
Query: 354 LIPLPEWSCIYYNNC 310
L P P+WS Y +C
Sbjct: 108 LQPYPDWSWANYKDC 122
>AF004842-1|AAD01205.1| 598|Apis mellifera major royal jelly
protein MRJP5 protein.
Length = 598
Score = 21.4 bits (43), Expect = 6.9
Identities = 7/15 (46%), Positives = 9/15 (60%)
Frame = -2
Query: 354 LIPLPEWSCIYYNNC 310
L P P+WS Y +C
Sbjct: 108 LQPYPDWSWANYKDC 122
>EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein.
Length = 684
Score = 21.0 bits (42), Expect = 9.2
Identities = 6/22 (27%), Positives = 16/22 (72%)
Frame = -3
Query: 140 FAEGRAWCLQRDAXTHTSSSCV 75
+ EG+AW ++ + ++T+++ V
Sbjct: 58 YNEGQAWNIEANIDSYTNAAAV 79
>EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein.
Length = 684
Score = 21.0 bits (42), Expect = 9.2
Identities = 6/22 (27%), Positives = 16/22 (72%)
Frame = -3
Query: 140 FAEGRAWCLQRDAXTHTSSSCV 75
+ EG+AW ++ + ++T+++ V
Sbjct: 58 YNEGQAWNIEANIDSYTNAAAV 79
>DQ855484-1|ABH88171.1| 130|Apis mellifera chemosensory protein 3
protein.
Length = 130
Score = 21.0 bits (42), Expect = 9.2
Identities = 6/12 (50%), Positives = 9/12 (75%)
Frame = -2
Query: 321 YNNCILDKGLCT 286
Y C++D+G CT
Sbjct: 47 YFKCLMDEGRCT 58
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 21.0 bits (42), Expect = 9.2
Identities = 9/37 (24%), Positives = 18/37 (48%)
Frame = +1
Query: 235 QNPYH*CVYNASNNXLVRTKTLVKNAIVVVDATPFRQ 345
+ P H VY N + + V + I ++ A+P ++
Sbjct: 359 KRPMHNVVYRPGENPVTQRLPAVLSRIGIILASPLKR 395
>AJ973401-1|CAJ01448.1| 130|Apis mellifera hypothetical protein
protein.
Length = 130
Score = 21.0 bits (42), Expect = 9.2
Identities = 6/12 (50%), Positives = 9/12 (75%)
Frame = -2
Query: 321 YNNCILDKGLCT 286
Y C++D+G CT
Sbjct: 47 YFKCLMDEGRCT 58
>AF481963-1|AAN59784.1| 130|Apis mellifera antennal-specific
protein 3c precursor protein.
Length = 130
Score = 21.0 bits (42), Expect = 9.2
Identities = 6/12 (50%), Positives = 9/12 (75%)
Frame = -2
Query: 321 YNNCILDKGLCT 286
Y C++D+G CT
Sbjct: 47 YFKCLMDEGRCT 58
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,016
Number of Sequences: 438
Number of extensions: 3082
Number of successful extensions: 22
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17482179
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -