Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV31027.Seq
(548 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U94855-1|AAD03467.1| 357|Homo sapiens translation initiation fa... 107 3e-23
CR456959-1|CAG33240.1| 357|Homo sapiens EIF3S5 protein. 107 3e-23
BT006894-1|AAP35540.1| 357|Homo sapiens eukaryotic translation ... 107 3e-23
BC000490-1|AAH00490.1| 357|Homo sapiens eukaryotic translation ... 107 3e-23
AK095574-1|BAC04577.1| 350|Homo sapiens protein ( Homo sapiens ... 107 3e-23
AF354444-1|AAK18634.1| 348|Homo sapiens IFP38 protein. 93 6e-19
D50063-1|BAA08780.1| 324|Homo sapiens proteasome subunit p40 / ... 59 9e-09
BC012606-1|AAH12606.1| 324|Homo sapiens proteasome (prosome, ma... 59 9e-09
BC000338-1|AAH00338.1| 326|Homo sapiens PSMD7 protein protein. 59 9e-09
AF092576-1|AAC84044.1| 352|Homo sapiens translation initiation ... 49 1e-05
U54559-1|AAD03465.1| 352|Homo sapiens translation initiation fa... 47 4e-05
CR456906-1|CAG33187.1| 352|Homo sapiens EIF3S3 protein. 47 4e-05
BT019594-1|AAV38401.1| 352|Homo sapiens eukaryotic translation ... 47 4e-05
BC000386-1|AAH00386.1| 352|Homo sapiens eukaryotic translation ... 47 4e-05
AK222620-1|BAD96340.1| 352|Homo sapiens eukaryotic translation ... 47 4e-05
AK222520-1|BAD96240.1| 352|Homo sapiens eukaryotic translation ... 47 4e-05
BC090880-1|AAH90880.1| 349|Homo sapiens EIF3H protein protein. 41 0.002
U70735-1|AAD03469.1| 297|Homo sapiens 34 kDa Mov34 homolog prot... 36 0.071
BC002520-1|AAH02520.2| 327|Homo sapiens COP9 constitutive photo... 36 0.071
AL050051-1|CAB43251.1| 118|Homo sapiens hypothetical protein pr... 30 4.6
M57417-1|AAA63229.2| 294|Homo sapiens mucin protein. 30 6.1
AK122582-1|BAC56923.1| 1383|Homo sapiens FLJ00269 protein protein. 30 6.1
>U94855-1|AAD03467.1| 357|Homo sapiens translation initiation
factor 3 47 kDa subunit protein.
Length = 357
Score = 107 bits (256), Expect = 3e-23
Identities = 47/83 (56%), Positives = 64/83 (77%)
Frame = +1
Query: 7 VKVHPVVLFQIVDAYERRNADSHRVIGTLLGTSDKGVVEVTNCFCVPHKEHADQVEAELN 186
V++HPV+L IVD+YERRN + RVIGTLLGT DK VEVTNCF VPH E D+V ++
Sbjct: 92 VRLHPVILASIVDSYERRNEGAARVIGTLLGTVDKHSVEVTNCFSVPHNESEDEVAVDME 151
Query: 187 YAMDVYELNRRVNSSESIVGWXA 255
+A ++YEL+++V+ +E I+GW A
Sbjct: 152 FAKNMYELHKKVSPNELILGWYA 174
Score = 91.9 bits (218), Expect = 1e-18
Identities = 39/81 (48%), Positives = 54/81 (66%)
Frame = +3
Query: 255 TGNEVTNHSSVIHEYYSRECREPVHVTLDTSLAGGXMGLRAYVCVPLGVPNGKQGCMFTP 434
TG+++T HS +IHEYYSRE P+H+T+DTSL G M ++AYV +GVP G MFTP
Sbjct: 175 TGHDITEHSVLIHEYYSREAPNPIHLTVDTSLQNGRMSIKAYVSTLMGVPGRTMGVMFTP 234
Query: 435 VDVTLTCYEPEIVGLQVCQKT 497
+ V Y+ E +G+ + KT
Sbjct: 235 LTVKYAYYDTERIGVDLIMKT 255
>CR456959-1|CAG33240.1| 357|Homo sapiens EIF3S5 protein.
Length = 357
Score = 107 bits (256), Expect = 3e-23
Identities = 47/83 (56%), Positives = 64/83 (77%)
Frame = +1
Query: 7 VKVHPVVLFQIVDAYERRNADSHRVIGTLLGTSDKGVVEVTNCFCVPHKEHADQVEAELN 186
V++HPV+L IVD+YERRN + RVIGTLLGT DK VEVTNCF VPH E D+V ++
Sbjct: 92 VRLHPVILASIVDSYERRNEGAARVIGTLLGTVDKHSVEVTNCFSVPHNESEDEVAVDME 151
Query: 187 YAMDVYELNRRVNSSESIVGWXA 255
+A ++YEL+++V+ +E I+GW A
Sbjct: 152 FAKNMYELHKKVSPNELILGWYA 174
Score = 91.9 bits (218), Expect = 1e-18
Identities = 39/81 (48%), Positives = 54/81 (66%)
Frame = +3
Query: 255 TGNEVTNHSSVIHEYYSRECREPVHVTLDTSLAGGXMGLRAYVCVPLGVPNGKQGCMFTP 434
TG+++T HS +IHEYYSRE P+H+T+DTSL G M ++AYV +GVP G MFTP
Sbjct: 175 TGHDITEHSVLIHEYYSREAPNPIHLTVDTSLQNGRMSIKAYVSTLMGVPGRTMGVMFTP 234
Query: 435 VDVTLTCYEPEIVGLQVCQKT 497
+ V Y+ E +G+ + KT
Sbjct: 235 LTVKYAYYDTERIGVDLIMKT 255
>BT006894-1|AAP35540.1| 357|Homo sapiens eukaryotic translation
initiation factor 3, subunit 5 epsilon, 47kDa protein.
Length = 357
Score = 107 bits (256), Expect = 3e-23
Identities = 47/83 (56%), Positives = 64/83 (77%)
Frame = +1
Query: 7 VKVHPVVLFQIVDAYERRNADSHRVIGTLLGTSDKGVVEVTNCFCVPHKEHADQVEAELN 186
V++HPV+L IVD+YERRN + RVIGTLLGT DK VEVTNCF VPH E D+V ++
Sbjct: 92 VRLHPVILASIVDSYERRNEGAARVIGTLLGTVDKHSVEVTNCFSVPHNESEDEVAVDME 151
Query: 187 YAMDVYELNRRVNSSESIVGWXA 255
+A ++YEL+++V+ +E I+GW A
Sbjct: 152 FAKNMYELHKKVSPNELILGWYA 174
Score = 91.9 bits (218), Expect = 1e-18
Identities = 39/81 (48%), Positives = 54/81 (66%)
Frame = +3
Query: 255 TGNEVTNHSSVIHEYYSRECREPVHVTLDTSLAGGXMGLRAYVCVPLGVPNGKQGCMFTP 434
TG+++T HS +IHEYYSRE P+H+T+DTSL G M ++AYV +GVP G MFTP
Sbjct: 175 TGHDITEHSVLIHEYYSREAPNPIHLTVDTSLQNGRMSIKAYVSTLMGVPGRTMGVMFTP 234
Query: 435 VDVTLTCYEPEIVGLQVCQKT 497
+ V Y+ E +G+ + KT
Sbjct: 235 LTVKYAYYDTERIGVDLIMKT 255
>BC000490-1|AAH00490.1| 357|Homo sapiens eukaryotic translation
initiation factor 3, subunit 5 epsilon, 47kDa protein.
Length = 357
Score = 107 bits (256), Expect = 3e-23
Identities = 47/83 (56%), Positives = 64/83 (77%)
Frame = +1
Query: 7 VKVHPVVLFQIVDAYERRNADSHRVIGTLLGTSDKGVVEVTNCFCVPHKEHADQVEAELN 186
V++HPV+L IVD+YERRN + RVIGTLLGT DK VEVTNCF VPH E D+V ++
Sbjct: 92 VRLHPVILASIVDSYERRNEGAARVIGTLLGTVDKHSVEVTNCFSVPHNESEDEVAVDME 151
Query: 187 YAMDVYELNRRVNSSESIVGWXA 255
+A ++YEL+++V+ +E I+GW A
Sbjct: 152 FAKNMYELHKKVSPNELILGWYA 174
Score = 91.9 bits (218), Expect = 1e-18
Identities = 39/81 (48%), Positives = 54/81 (66%)
Frame = +3
Query: 255 TGNEVTNHSSVIHEYYSRECREPVHVTLDTSLAGGXMGLRAYVCVPLGVPNGKQGCMFTP 434
TG+++T HS +IHEYYSRE P+H+T+DTSL G M ++AYV +GVP G MFTP
Sbjct: 175 TGHDITEHSVLIHEYYSREAPNPIHLTVDTSLQNGRMSIKAYVSTLMGVPGRTMGVMFTP 234
Query: 435 VDVTLTCYEPEIVGLQVCQKT 497
+ V Y+ E +G+ + KT
Sbjct: 235 LTVKYAYYDTERIGVDLIMKT 255
>AK095574-1|BAC04577.1| 350|Homo sapiens protein ( Homo sapiens
cDNA FLJ38255 fis, clone FCBBF3001020, highly similar to
EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 5. ).
Length = 350
Score = 107 bits (256), Expect = 3e-23
Identities = 47/83 (56%), Positives = 64/83 (77%)
Frame = +1
Query: 7 VKVHPVVLFQIVDAYERRNADSHRVIGTLLGTSDKGVVEVTNCFCVPHKEHADQVEAELN 186
V++HPV+L IVD+YERRN + RVIGTLLGT DK VEVTNCF VPH E D+V ++
Sbjct: 85 VRLHPVILASIVDSYERRNEGAARVIGTLLGTVDKHSVEVTNCFSVPHNESEDEVAVDME 144
Query: 187 YAMDVYELNRRVNSSESIVGWXA 255
+A ++YEL+++V+ +E I+GW A
Sbjct: 145 FAKNMYELHKKVSPNELILGWYA 167
Score = 91.9 bits (218), Expect = 1e-18
Identities = 39/81 (48%), Positives = 54/81 (66%)
Frame = +3
Query: 255 TGNEVTNHSSVIHEYYSRECREPVHVTLDTSLAGGXMGLRAYVCVPLGVPNGKQGCMFTP 434
TG+++T HS +IHEYYSRE P+H+T+DTSL G M ++AYV +GVP G MFTP
Sbjct: 168 TGHDITEHSVLIHEYYSREAPNPIHLTVDTSLQNGRMSIKAYVSTLMGVPGRTMGVMFTP 227
Query: 435 VDVTLTCYEPEIVGLQVCQKT 497
+ V Y+ E +G+ + KT
Sbjct: 228 LTVKYAYYDTERIGVDLIMKT 248
>AF354444-1|AAK18634.1| 348|Homo sapiens IFP38 protein.
Length = 348
Score = 93.1 bits (221), Expect = 6e-19
Identities = 43/83 (51%), Positives = 63/83 (75%)
Frame = +1
Query: 7 VKVHPVVLFQIVDAYERRNADSHRVIGTLLGTSDKGVVEVTNCFCVPHKEHADQVEAELN 186
V++HPV+L VD+YERRN + RVIGTLLGT +K VEVTNCF V + E +D+V ++
Sbjct: 82 VRLHPVLLASTVDSYERRNKGAARVIGTLLGTVNKHSVEVTNCFSVSYNE-SDEVVVDME 140
Query: 187 YAMDVYELNRRVNSSESIVGWXA 255
+A ++YEL+++V+ +E I+GW A
Sbjct: 141 FAKNMYELHKKVSPNELILGWYA 163
Score = 81.0 bits (191), Expect = 3e-15
Identities = 36/80 (45%), Positives = 53/80 (66%)
Frame = +3
Query: 258 GNEVTNHSSVIHEYYSRECREPVHVTLDTSLAGGXMGLRAYVCVPLGVPNGKQGCMFTPV 437
G+++T HS +IHEYYSRE P+H+T+DTSL G M ++AYV +GVP G+ +FTP+
Sbjct: 165 GHDITEHSVLIHEYYSREAPNPIHLTVDTSLQNGHMSIKAYVSTLMGVP-GRTVGVFTPL 223
Query: 438 DVTLTCYEPEIVGLQVCQKT 497
V Y+ E + + + KT
Sbjct: 224 TVKYAYYDTECIRVDLIMKT 243
>D50063-1|BAA08780.1| 324|Homo sapiens proteasome subunit p40 /
Mov34 protein protein.
Length = 324
Score = 59.3 bits (137), Expect = 9e-09
Identities = 34/86 (39%), Positives = 52/86 (60%), Gaps = 5/86 (5%)
Frame = +1
Query: 7 VKVHPVVLFQIVDAYER--RNADSHRVIGTLLGTSDKGVVEVTNCFCVPHKE--HADQV- 171
V VHP+VL +VD + R + + RV+G LLG+ K V++V+N F VP E D V
Sbjct: 9 VVVHPLVLLSVVDHFNRIVKVGNQKRVVGVLLGSWQKKVLDVSNSFAVPFDEDDKDDSVW 68
Query: 172 EAELNYAMDVYELNRRVNSSESIVGW 249
+ +Y ++Y + ++VN+ E IVGW
Sbjct: 69 FLDHDYLENMYGMFKKVNARERIVGW 94
>BC012606-1|AAH12606.1| 324|Homo sapiens proteasome (prosome,
macropain) 26S subunit, non-ATPase, 7 (Mov34 homolog)
protein.
Length = 324
Score = 59.3 bits (137), Expect = 9e-09
Identities = 34/86 (39%), Positives = 52/86 (60%), Gaps = 5/86 (5%)
Frame = +1
Query: 7 VKVHPVVLFQIVDAYER--RNADSHRVIGTLLGTSDKGVVEVTNCFCVPHKE--HADQV- 171
V VHP+VL +VD + R + + RV+G LLG+ K V++V+N F VP E D V
Sbjct: 9 VVVHPLVLLSVVDHFNRIGKVGNQKRVVGVLLGSWQKKVLDVSNSFAVPFDEDDKDDSVW 68
Query: 172 EAELNYAMDVYELNRRVNSSESIVGW 249
+ +Y ++Y + ++VN+ E IVGW
Sbjct: 69 FLDHDYLENMYGMFKKVNARERIVGW 94
>BC000338-1|AAH00338.1| 326|Homo sapiens PSMD7 protein protein.
Length = 326
Score = 59.3 bits (137), Expect = 9e-09
Identities = 34/86 (39%), Positives = 52/86 (60%), Gaps = 5/86 (5%)
Frame = +1
Query: 7 VKVHPVVLFQIVDAYER--RNADSHRVIGTLLGTSDKGVVEVTNCFCVPHKE--HADQV- 171
V VHP+VL +VD + R + + RV+G LLG+ K V++V+N F VP E D V
Sbjct: 9 VVVHPLVLLSVVDHFNRIGKVGNQKRVVGVLLGSWQKKVLDVSNSFAVPFDEDDKDDSVW 68
Query: 172 EAELNYAMDVYELNRRVNSSESIVGW 249
+ +Y ++Y + ++VN+ E IVGW
Sbjct: 69 FLDHDYLENMYGMFKKVNARERIVGW 94
>AF092576-1|AAC84044.1| 352|Homo sapiens translation initiation
factor eIF3 p40 subunit protein.
Length = 352
Score = 48.8 bits (111), Expect = 1e-05
Identities = 26/81 (32%), Positives = 39/81 (48%)
Frame = +1
Query: 7 VKVHPVVLFQIVDAYERRNADSHRVIGTLLGTSDKGVVEVTNCFCVPHKEHADQVEAELN 186
V++ +V+ +I+ Y+ + V G LLG K +E+TNCF P D E+
Sbjct: 39 VQIDGLVVLKIIKHYQEEGQGTEVVQGVLLGLVVKDRLEITNCFPFPQHTEDDADFDEVQ 98
Query: 187 YAMDVYELNRRVNSSESIVGW 249
Y M++ R VN VGW
Sbjct: 99 YQMEMMRSLRHVNIDHLHVGW 119
>U54559-1|AAD03465.1| 352|Homo sapiens translation initiation
factor eIF3 p40 subunit protein.
Length = 352
Score = 47.2 bits (107), Expect = 4e-05
Identities = 25/81 (30%), Positives = 39/81 (48%)
Frame = +1
Query: 7 VKVHPVVLFQIVDAYERRNADSHRVIGTLLGTSDKGVVEVTNCFCVPHKEHADQVEAELN 186
V++ +V+ +I+ Y+ + V G LLG + +E+TNCF P D E+
Sbjct: 39 VQIDGLVVLKIIKHYQEEGQGTEVVQGVLLGLVVEDRLEITNCFPFPQHTEDDADFDEVQ 98
Query: 187 YAMDVYELNRRVNSSESIVGW 249
Y M++ R VN VGW
Sbjct: 99 YQMEMMRSLRHVNIDHLHVGW 119
>CR456906-1|CAG33187.1| 352|Homo sapiens EIF3S3 protein.
Length = 352
Score = 47.2 bits (107), Expect = 4e-05
Identities = 25/81 (30%), Positives = 39/81 (48%)
Frame = +1
Query: 7 VKVHPVVLFQIVDAYERRNADSHRVIGTLLGTSDKGVVEVTNCFCVPHKEHADQVEAELN 186
V++ +V+ +I+ Y+ + V G LLG + +E+TNCF P D E+
Sbjct: 39 VQIDGLVVLKIIKHYQEEGQGTEVVQGVLLGLVVEDRLEITNCFPFPQHTEDDADFDEVQ 98
Query: 187 YAMDVYELNRRVNSSESIVGW 249
Y M++ R VN VGW
Sbjct: 99 YQMEMMRSLRHVNIDHLHVGW 119
>BT019594-1|AAV38401.1| 352|Homo sapiens eukaryotic translation
initiation factor 3, subunit 3 gamma, 40kDa protein.
Length = 352
Score = 47.2 bits (107), Expect = 4e-05
Identities = 25/81 (30%), Positives = 39/81 (48%)
Frame = +1
Query: 7 VKVHPVVLFQIVDAYERRNADSHRVIGTLLGTSDKGVVEVTNCFCVPHKEHADQVEAELN 186
V++ +V+ +I+ Y+ + V G LLG + +E+TNCF P D E+
Sbjct: 39 VQIDGLVVLKIIKHYQEEGQGTEVVQGVLLGLVVEDRLEITNCFPFPQHTEDDADFDEVQ 98
Query: 187 YAMDVYELNRRVNSSESIVGW 249
Y M++ R VN VGW
Sbjct: 99 YQMEMMRSLRHVNIDHLHVGW 119
>BC000386-1|AAH00386.1| 352|Homo sapiens eukaryotic translation
initiation factor 3, subunit 3 gamma, 40kDa protein.
Length = 352
Score = 47.2 bits (107), Expect = 4e-05
Identities = 25/81 (30%), Positives = 39/81 (48%)
Frame = +1
Query: 7 VKVHPVVLFQIVDAYERRNADSHRVIGTLLGTSDKGVVEVTNCFCVPHKEHADQVEAELN 186
V++ +V+ +I+ Y+ + V G LLG + +E+TNCF P D E+
Sbjct: 39 VQIDGLVVLKIIKHYQEEGQGTEVVQGVLLGLVVEDRLEITNCFPFPQHTEDDADFDEVQ 98
Query: 187 YAMDVYELNRRVNSSESIVGW 249
Y M++ R VN VGW
Sbjct: 99 YQMEMMRSLRHVNIDHLHVGW 119
>AK222620-1|BAD96340.1| 352|Homo sapiens eukaryotic translation
initiation factor 3, subunit 3 gamma, 40kDa variant
protein.
Length = 352
Score = 47.2 bits (107), Expect = 4e-05
Identities = 25/81 (30%), Positives = 39/81 (48%)
Frame = +1
Query: 7 VKVHPVVLFQIVDAYERRNADSHRVIGTLLGTSDKGVVEVTNCFCVPHKEHADQVEAELN 186
V++ +V+ +I+ Y+ + V G LLG + +E+TNCF P D E+
Sbjct: 39 VQIDGLVVLKIIKHYQEEGQGTEVVQGVLLGLVVEDRLEITNCFPFPQHTEDDADFDEVQ 98
Query: 187 YAMDVYELNRRVNSSESIVGW 249
Y M++ R VN VGW
Sbjct: 99 YQMEMMRSLRHVNIDHLHVGW 119
>AK222520-1|BAD96240.1| 352|Homo sapiens eukaryotic translation
initiation factor 3, subunit 3 gamma, 40kDa variant
protein.
Length = 352
Score = 47.2 bits (107), Expect = 4e-05
Identities = 25/81 (30%), Positives = 39/81 (48%)
Frame = +1
Query: 7 VKVHPVVLFQIVDAYERRNADSHRVIGTLLGTSDKGVVEVTNCFCVPHKEHADQVEAELN 186
V++ +V+ +I+ Y+ + V G LLG + +E+TNCF P D E+
Sbjct: 39 VQIDGLVVLKIIKHYQEEGQGTEVVQGVLLGLVVEDRLEITNCFPFPQHTEDDADFDEVQ 98
Query: 187 YAMDVYELNRRVNSSESIVGW 249
Y M++ R VN VGW
Sbjct: 99 YQMEMMRSLRHVNIDHLHVGW 119
>BC090880-1|AAH90880.1| 349|Homo sapiens EIF3H protein protein.
Length = 349
Score = 41.1 bits (92), Expect = 0.002
Identities = 25/81 (30%), Positives = 38/81 (46%)
Frame = +1
Query: 7 VKVHPVVLFQIVDAYERRNADSHRVIGTLLGTSDKGVVEVTNCFCVPHKEHADQVEAELN 186
V++ +V+F+ Y+ + V G LLG + +E+TNCF P D E+
Sbjct: 39 VQIDGLVVFK---HYQEEGQGTEVVQGVLLGLVVEDRLEITNCFPFPQHTEDDADFDEVQ 95
Query: 187 YAMDVYELNRRVNSSESIVGW 249
Y M++ R VN VGW
Sbjct: 96 YQMEMMRSLRHVNIDHLHVGW 116
>U70735-1|AAD03469.1| 297|Homo sapiens 34 kDa Mov34 homolog
protein.
Length = 297
Score = 36.3 bits (80), Expect = 0.071
Identities = 23/86 (26%), Positives = 40/86 (46%), Gaps = 3/86 (3%)
Frame = +1
Query: 1 ISVKVHPVVLFQIVDAYERRNADSHR---VIGTLLGTSDKGVVEVTNCFCVPHKEHADQV 171
+SV +HP+V+ I D + R + R VIG L+G + +EV N F + +++
Sbjct: 9 VSVALHPLVILNISDHWIRMRSQEGRPVQVIGALIGKQEGRNIEVMNSFELLSHTVEEKI 68
Query: 172 EAELNYAMDVYELNRRVNSSESIVGW 249
+ Y E ++V +GW
Sbjct: 69 IIDKEYYYTKEEQFKQVFKELEFLGW 94
>BC002520-1|AAH02520.2| 327|Homo sapiens COP9 constitutive
photomorphogenic homolog subunit 6 (Arabidopsis)
protein.
Length = 327
Score = 36.3 bits (80), Expect = 0.071
Identities = 23/86 (26%), Positives = 40/86 (46%), Gaps = 3/86 (3%)
Frame = +1
Query: 1 ISVKVHPVVLFQIVDAYERRNADSHR---VIGTLLGTSDKGVVEVTNCFCVPHKEHADQV 171
+SV +HP+V+ I D + R + R VIG L+G + +EV N F + +++
Sbjct: 39 VSVALHPLVILNISDHWIRMRSQEGRPVQVIGALIGKQEGRNIEVMNSFELLSHTVEEKI 98
Query: 172 EAELNYAMDVYELNRRVNSSESIVGW 249
+ Y E ++V +GW
Sbjct: 99 IIDKEYYYTKEEQFKQVFKELEFLGW 124
>AL050051-1|CAB43251.1| 118|Homo sapiens hypothetical protein
protein.
Length = 118
Score = 30.3 bits (65), Expect = 4.6
Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = +3
Query: 315 REPVHVTLDTSLAGGXMGLRAYVCVPLG-VPNGKQGCMFTPVDVTLTC 455
R PV V+ L G G+R+ + V L +P G+ GC FT + V L C
Sbjct: 10 RVPVRVSSAPGLGFGGAGMRSLLSVGLPPIPIGR-GCHFTLITVFLYC 56
>M57417-1|AAA63229.2| 294|Homo sapiens mucin protein.
Length = 294
Score = 29.9 bits (64), Expect = 6.1
Identities = 30/101 (29%), Positives = 37/101 (36%), Gaps = 1/101 (0%)
Frame = -2
Query: 538 PRGNAXRPXTQPDTVFWHTCRPTISGS*HVRVTSTGVNMQPCF-PFGTPNGTQTYARKPX 362
P G T T T PT +G+ TST + P TP GTQT P
Sbjct: 111 PTGTQTLTPTPITTTTTVTPTPTPTGT--QTPTSTPITTTTTVTPTPTPTGTQTPTTTPI 168
Query: 361 XPPAXEVSRVTXTGSRHSRE*YSCITEEWLVTSLPVPXNQQ 239
T TG+R+ + IT VT P P + Q
Sbjct: 169 TTTTTVTPTPTPTGTRYPTP--TPITTTTTVTPTPTPTSTQ 207
>AK122582-1|BAC56923.1| 1383|Homo sapiens FLJ00269 protein protein.
Length = 1383
Score = 29.9 bits (64), Expect = 6.1
Identities = 16/70 (22%), Positives = 29/70 (41%), Gaps = 3/70 (4%)
Frame = -2
Query: 517 PXTQPDTVFWHTCRPTISGS*HVRVTSTGVNMQPCFPFGTP---NGTQTYARKPXXPPAX 347
P ++ WH PT S TG++ F F P +G +T++ P P +
Sbjct: 639 PTDHSNSTTWHRLHPTDGSSGQNSKVGTGMSKSASFAFEFPKDRSGIETFSPPPPPPKSR 698
Query: 346 EVSRVTXTGS 317
+ ++ + S
Sbjct: 699 HLLKMNKSSS 708
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,038,605
Number of Sequences: 237096
Number of extensions: 1854337
Number of successful extensions: 4833
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 4549
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4773
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5421005376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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