Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV31025.Seq
         (598 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    29   0.039
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    29   0.039
AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax pr...    29   0.039
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    29   0.039
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    29   0.039
AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax pr...    29   0.039
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           29   0.039
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    29   0.039
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    23   2.0  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    22   3.4  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      22   3.4  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      22   3.4  
AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax pr...    22   3.4  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    21   7.9  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   7.9  

>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 28.7 bits (61), Expect = 0.039
 Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
 Frame = -2

Query: 375 IASAVSLLTSSPFPQNLASSSMPSSCMTVESTSKQTQSAVRTT-PGQSVGATSR*STPVR 199
           +AS   L T+   P++    S PS+    +S+   +  +V T+ PG+   +T+  +    
Sbjct: 110 VASPQDLSTNGAPPRSTPPLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTTSQNLSSP 169

Query: 198 ASSTSRTA 175
           ASSTS T+
Sbjct: 170 ASSTSSTS 177


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 28.7 bits (61), Expect = 0.039
 Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
 Frame = -2

Query: 375 IASAVSLLTSSPFPQNLASSSMPSSCMTVESTSKQTQSAVRTT-PGQSVGATSR*STPVR 199
           +AS   L T+   P++    S PS+    +S+   +  +V T+ PG+   +T+  +    
Sbjct: 110 VASPQDLSTNGAPPRSTPPLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSP 169

Query: 198 ASSTSRTA 175
           ASSTS T+
Sbjct: 170 ASSTSSTS 177


>AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax
           protein.
          Length = 230

 Score = 28.7 bits (61), Expect = 0.039
 Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
 Frame = -2

Query: 375 IASAVSLLTSSPFPQNLASSSMPSSCMTVESTSKQTQSAVRTT-PGQSVGATSR*STPVR 199
           +AS   L T+   P++    S PS+    +S+   +  +V T+ PG+   +T+  +    
Sbjct: 110 VASPQDLSTNGAPPRSTPPLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSP 169

Query: 198 ASSTSRTA 175
           ASSTS T+
Sbjct: 170 ASSTSSTS 177


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 28.7 bits (61), Expect = 0.039
 Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
 Frame = -2

Query: 375 IASAVSLLTSSPFPQNLASSSMPSSCMTVESTSKQTQSAVRTT-PGQSVGATSR*STPVR 199
           +AS   L T+   P++    S PS+    +S+   +  +V T+ PG+   +T+  +    
Sbjct: 110 VASPQDLSTNGAPPRSTPPLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSP 169

Query: 198 ASSTSRTA 175
           ASSTS T+
Sbjct: 170 ASSTSSTS 177


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 28.7 bits (61), Expect = 0.039
 Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
 Frame = -2

Query: 375 IASAVSLLTSSPFPQNLASSSMPSSCMTVESTSKQTQSAVRTT-PGQSVGATSR*STPVR 199
           +AS   L T+   P++    S PS+    +S+   +  +V T+ PG+   +T+  +    
Sbjct: 110 VASPQDLSTNGAPPRSTPPLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSP 169

Query: 198 ASSTSRTA 175
           ASSTS T+
Sbjct: 170 ASSTSSTS 177


>AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax
           protein.
          Length = 268

 Score = 28.7 bits (61), Expect = 0.039
 Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
 Frame = -2

Query: 375 IASAVSLLTSSPFPQNLASSSMPSSCMTVESTSKQTQSAVRTT-PGQSVGATSR*STPVR 199
           +AS   L T+   P++    S PS+    +S+   +  +V T+ PG+   +T+  +    
Sbjct: 66  VASPQDLSTNGAPPRSTPPLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSP 125

Query: 198 ASSTSRTA 175
           ASSTS T+
Sbjct: 126 ASSTSSTS 133


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 28.7 bits (61), Expect = 0.039
 Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
 Frame = -2

Query: 375 IASAVSLLTSSPFPQNLASSSMPSSCMTVESTSKQTQSAVRTT-PGQSVGATSR*STPVR 199
           +AS   L T+   P++    S PS+    +S+   +  +V T+ PG+   +T+  +    
Sbjct: 110 VASPQDLSTNGAPPRSTPPLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSP 169

Query: 198 ASSTSRTA 175
           ASSTS T+
Sbjct: 170 ASSTSSTS 177


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 28.7 bits (61), Expect = 0.039
 Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
 Frame = -2

Query: 375 IASAVSLLTSSPFPQNLASSSMPSSCMTVESTSKQTQSAVRTT-PGQSVGATSR*STPVR 199
           +AS   L T+   P++    S PS+    +S+   +  +V T+ PG+   +T+  +    
Sbjct: 110 VASPQDLSTNGAPPRSTPPLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSP 169

Query: 198 ASSTSRTA 175
           ASSTS T+
Sbjct: 170 ASSTSSTS 177


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +1

Query: 373 NGRQYDIPGSLEEETGHH 426
           N   YD+ GS +  TGHH
Sbjct: 203 NVMAYDLRGSWDGVTGHH 220


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = +1

Query: 385 YDIPGSLEEETGHH 426
           YD  G  E ETGH+
Sbjct: 279 YDFHGKWERETGHN 292


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 8/29 (27%), Positives = 19/29 (65%)
 Frame = +2

Query: 98  SEFDHNSFVTRRRSNRDGSLQFEKQPAVR 184
           S+ DH + +   ++N+DG+   +K+P ++
Sbjct: 452 SQVDHKNNLGDSKNNQDGNNGEKKKPHIK 480


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 8/29 (27%), Positives = 19/29 (65%)
 Frame = +2

Query: 98  SEFDHNSFVTRRRSNRDGSLQFEKQPAVR 184
           S+ DH + +   ++N+DG+   +K+P ++
Sbjct: 344 SQVDHKNNLGDSKNNQDGNNGEKKKPHIK 372


>AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax
           protein.
          Length = 157

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 12/44 (27%), Positives = 22/44 (50%)
 Frame = -2

Query: 375 IASAVSLLTSSPFPQNLASSSMPSSCMTVESTSKQTQSAVRTTP 244
           +AS   L T+   P++    S PS+    +S+   +  +V T+P
Sbjct: 110 VASPQDLSTNGAPPRSTPPLSTPSNSNATKSSGLTSPLSVSTSP 153


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 11/42 (26%), Positives = 23/42 (54%)
 Frame = +3

Query: 78  QSVNKIEVNSIIIVSLLGEEATEMALYSLKSNLQYATLKTLS 203
           +++ ++EV ++ I+ L+        L +L +  +YA  K LS
Sbjct: 32  ENLARVEVATLAIIFLVTVIGNSTVLLALWTRRRYAGRKKLS 73


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +1

Query: 385 YDIPGSLEEETGHH 426
           YD  G+ E +TGH+
Sbjct: 834 YDYHGAWERQTGHN 847


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 123,432
Number of Sequences: 336
Number of extensions: 2205
Number of successful extensions: 16
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15039504
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)