Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV31025.Seq
         (598 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435327-1|ABD92642.1|  145|Apis mellifera OBP10 protein.              25   0.75 
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    25   0.75 
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    24   0.98 
AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter...    21   6.9  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    21   9.2  

>DQ435327-1|ABD92642.1|  145|Apis mellifera OBP10 protein.
          Length = 145

 Score = 24.6 bits (51), Expect = 0.75
 Identities = 18/58 (31%), Positives = 23/58 (39%)
 Frame = -1

Query: 415 SLLQGFLECHIAAHCFRRQSFNLVSFPAELGQFIDAFILYDGRVYIEANAVRCPNNSW 242
           SLL   L C  + HC  R SF      A     ++A     G   ++  AVR  N  W
Sbjct: 8   SLLITCLICSPSVHCGTRPSFVSDEMIATAASVVNACQTQTGVATVDIEAVR--NGQW 63


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 24.6 bits (51), Expect = 0.75
 Identities = 21/67 (31%), Positives = 32/67 (47%)
 Frame = -2

Query: 381 PPIASAVSLLTSSPFPQNLASSSMPSSCMTVESTSKQTQSAVRTTPGQSVGATSR*STPV 202
           P IASA S  TSS  P   A+++   S      T+KQ    +++T        +R  + +
Sbjct: 515 PRIASAPSSSTSSSPPAKGAAAAGQPSKRNGGETNKQELKRLKSTVSLLPLPLARTPSVM 574

Query: 201 RASSTSR 181
            ASST +
Sbjct: 575 SASSTCK 581


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 24.2 bits (50), Expect = 0.98
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = +1

Query: 4   CSSYFPQSGSFIITLVTFTKDK*Y 75
           CS  F QSG  +I + T T +K Y
Sbjct: 181 CSKTFIQSGQLVIHMRTHTGEKPY 204


>AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter
           Am-EAAT protein.
          Length = 543

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 11/22 (50%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
 Frame = -1

Query: 361 QSFNLVSFPAE-LGQFIDAFIL 299
           QS  L+SFP E L + +  FIL
Sbjct: 91  QSITLISFPGELLMRLLKMFIL 112


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +2

Query: 458 IXKFPVRLTPGITELVKSYTK 520
           + KFP+ L PG   + +  TK
Sbjct: 528 LDKFPITLQPGKNTIEQKSTK 548


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,218
Number of Sequences: 438
Number of extensions: 2668
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17482179
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)