Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV31023.Seq
         (598 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ386730-1|ABD46888.1|  301|Homo sapiens cardiolipin synthase pr...   110   3e-24
AL035461-9|CAB55278.1|  301|Homo sapiens cardiolipin synthase 1 ...   110   3e-24
AF241784-1|AAG44472.1|  301|Homo sapiens CAPTase-iso protein.         110   3e-24
AK131416-1|BAD18563.1|  892|Homo sapiens protein ( Homo sapiens ...    31   3.1  
AB111887-1|BAC98375.1| 1135|Homo sapiens KIAA2035 protein protein.     31   3.1  
X65644-1|CAA46596.1| 2500|Homo sapiens MBP-2 (MHC Binding Protei...    30   7.2  
M60119-1|AAB88218.1| 1833|Homo sapiens HIV-EP2/Schnurri-2 protein.     30   7.2  
DQ231041-1|ABB16331.1| 2446|Homo sapiens c-myc intron-binding pr...    30   7.2  
AL023584-1|CAA19042.1| 2446|Homo sapiens human immunodeficiency ...    30   7.2  
AF153836-1|AAF81365.1| 2446|Homo sapiens human immunodeficiency ...    30   7.2  

>DQ386730-1|ABD46888.1|  301|Homo sapiens cardiolipin synthase
           protein.
          Length = 301

 Score =  110 bits (265), Expect = 3e-24
 Identities = 50/85 (58%), Positives = 68/85 (80%)
 Frame = -3

Query: 512 STLFISLTWQDLIPISLTLLIVGRDIALVVAGFVIRYISXPPPRTLSRYFDVTHATAQLA 333
           S L++SLT+ DLIP+ LT +I+ RD+ L+ A F +RY + P PRTL++YF+  +ATA+L 
Sbjct: 178 SILYVSLTYADLIPVPLTYMIISRDVMLIAAVFYVRYRTLPTPRTLAKYFNPCYATARLK 237

Query: 332 PTFISKVNTAVQLLLVGTTLASPVF 258
           PTFISKVNTAVQL+LV  +LA+PVF
Sbjct: 238 PTFISKVNTAVQLILVAASLAAPVF 262


>AL035461-9|CAB55278.1|  301|Homo sapiens cardiolipin synthase 1
           protein.
          Length = 301

 Score =  110 bits (265), Expect = 3e-24
 Identities = 50/85 (58%), Positives = 68/85 (80%)
 Frame = -3

Query: 512 STLFISLTWQDLIPISLTLLIVGRDIALVVAGFVIRYISXPPPRTLSRYFDVTHATAQLA 333
           S L++SLT+ DLIP+ LT +I+ RD+ L+ A F +RY + P PRTL++YF+  +ATA+L 
Sbjct: 178 SILYVSLTYADLIPVPLTYMIISRDVMLIAAVFYVRYRTLPTPRTLAKYFNPCYATARLK 237

Query: 332 PTFISKVNTAVQLLLVGTTLASPVF 258
           PTFISKVNTAVQL+LV  +LA+PVF
Sbjct: 238 PTFISKVNTAVQLILVAASLAAPVF 262


>AF241784-1|AAG44472.1|  301|Homo sapiens CAPTase-iso protein.
          Length = 301

 Score =  110 bits (265), Expect = 3e-24
 Identities = 50/85 (58%), Positives = 68/85 (80%)
 Frame = -3

Query: 512 STLFISLTWQDLIPISLTLLIVGRDIALVVAGFVIRYISXPPPRTLSRYFDVTHATAQLA 333
           S L++SLT+ DLIP+ LT +I+ RD+ L+ A F +RY + P PRTL++YF+  +ATA+L 
Sbjct: 178 SILYVSLTYADLIPVPLTYMIISRDVMLIAAVFYVRYRTLPTPRTLAKYFNPCYATARLK 237

Query: 332 PTFISKVNTAVQLLLVGTTLASPVF 258
           PTFISKVNTAVQL+LV  +LA+PVF
Sbjct: 238 PTFISKVNTAVQLILVAASLAAPVF 262


>AK131416-1|BAD18563.1|  892|Homo sapiens protein ( Homo sapiens
           cDNA FLJ16526 fis, clone OCBBF2006987. ).
          Length = 892

 Score = 31.1 bits (67), Expect = 3.1
 Identities = 21/70 (30%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
 Frame = +3

Query: 246 DQHTKNWGRQRSAYQ*KLNSCVHFTDKSRCKLCGCVCYIEIP-TQRSRWWXAYISNDKSS 422
           ++H  N      +    L+S V  T+ S  K  G     +IP TQR     +YI++ K  
Sbjct: 46  EKHKHNSPSSDDSSDYSLDSDVEHTESSHKKRTGFYRDYDIPFTQRGHISGSYITSKKGQ 105

Query: 423 HNQCYISPNY 452
           HN+ + S  Y
Sbjct: 106 HNKKFKSKEY 115


>AB111887-1|BAC98375.1| 1135|Homo sapiens KIAA2035 protein protein.
          Length = 1135

 Score = 31.1 bits (67), Expect = 3.1
 Identities = 21/70 (30%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
 Frame = +3

Query: 246 DQHTKNWGRQRSAYQ*KLNSCVHFTDKSRCKLCGCVCYIEIP-TQRSRWWXAYISNDKSS 422
           ++H  N      +    L+S V  T+ S  K  G     +IP TQR     +YI++ K  
Sbjct: 14  EKHKHNSPSSDDSSDYSLDSDVEHTESSHKKRTGFYRDYDIPFTQRGHISGSYITSKKGQ 73

Query: 423 HNQCYISPNY 452
           HN+ + S  Y
Sbjct: 74  HNKKFKSKEY 83


>X65644-1|CAA46596.1| 2500|Homo sapiens MBP-2 (MHC Binding Protein-2)
            protein.
          Length = 2500

 Score = 29.9 bits (64), Expect = 7.2
 Identities = 11/35 (31%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
 Frame = +3

Query: 351  VCYIEIPTQRSRWWXAYISNDKSSHNQ-CYISPNY 452
            VC + +P Q+  WW A+  +  + H Q  Y  P++
Sbjct: 1267 VCMVHLPAQQPPWWQAHFPHPFAQHPQKSYGKPSF 1301


>M60119-1|AAB88218.1| 1833|Homo sapiens HIV-EP2/Schnurri-2 protein.
          Length = 1833

 Score = 29.9 bits (64), Expect = 7.2
 Identities = 11/35 (31%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
 Frame = +3

Query: 351 VCYIEIPTQRSRWWXAYISNDKSSHNQ-CYISPNY 452
           VC + +P Q+  WW A+  +  + H Q  Y  P++
Sbjct: 600 VCMVHLPAQQPPWWQAHFPHPFAQHPQKSYGKPSF 634


>DQ231041-1|ABB16331.1| 2446|Homo sapiens c-myc intron-binding protein
            1 protein.
          Length = 2446

 Score = 29.9 bits (64), Expect = 7.2
 Identities = 11/35 (31%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
 Frame = +3

Query: 351  VCYIEIPTQRSRWWXAYISNDKSSHNQ-CYISPNY 452
            VC + +P Q+  WW A+  +  + H Q  Y  P++
Sbjct: 1213 VCMVHLPAQQPPWWQAHFPHPFAQHPQKSYGKPSF 1247


>AL023584-1|CAA19042.1| 2446|Homo sapiens human immunodeficiency virus
            type I enhancer binding protein 2 protein.
          Length = 2446

 Score = 29.9 bits (64), Expect = 7.2
 Identities = 11/35 (31%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
 Frame = +3

Query: 351  VCYIEIPTQRSRWWXAYISNDKSSHNQ-CYISPNY 452
            VC + +P Q+  WW A+  +  + H Q  Y  P++
Sbjct: 1213 VCMVHLPAQQPPWWQAHFPHPFAQHPQKSYGKPSF 1247


>AF153836-1|AAF81365.1| 2446|Homo sapiens human immunodeficiency virus
            type I enhancer-binding protein 2 protein.
          Length = 2446

 Score = 29.9 bits (64), Expect = 7.2
 Identities = 11/35 (31%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
 Frame = +3

Query: 351  VCYIEIPTQRSRWWXAYISNDKSSHNQ-CYISPNY 452
            VC + +P Q+  WW A+  +  + H Q  Y  P++
Sbjct: 1213 VCMVHLPAQQPPWWQAHFPHPFAQHPQKSYGKPSF 1247


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,597,425
Number of Sequences: 237096
Number of extensions: 1559049
Number of successful extensions: 6164
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 6141
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6164
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6324506272
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)